RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 GPATCH8Q9UKJ3 1502 aaKnown RBP15.96■□□□□ 0.15
SMAD9-201ENST00000350148 MORC1Q86VD1 984 aa15.96■□□□□ 0.15
SMAD9-201ENST00000350148 CCDC136Q96JN2 1154 aa15.96■□□□□ 0.15
SMAD9-201ENST00000350148 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.95■□□□□ 0.14
SMAD9-201ENST00000350148 MAPK8IP3Q9UPT6 1336 aa15.95■□□□□ 0.14
SMAD9-201ENST00000350148 NCOA1Q15788 1441 aa15.94■□□□□ 0.14
SMAD9-201ENST00000350148 TERF2IPQ9NYB0 399 aa15.94■□□□□ 0.14
SMAD9-201ENST00000350148 DISP1Q96F81 1524 aa15.94■□□□□ 0.14
SMAD9-201ENST00000350148 ST20-MTHFSA0A0A6YYL1 179 aa15.93■□□□□ 0.14
SMAD9-201ENST00000350148 CD109Q6YHK3 1445 aa15.93■□□□□ 0.14
SMAD9-201ENST00000350148 NLRP13Q86W25 1043 aa15.92■□□□□ 0.14
SMAD9-201ENST00000350148 ERICH6BQ5W0A0 696 aa15.9■□□□□ 0.14
SMAD9-201ENST00000350148 PLCH2O75038 1416 aa15.9■□□□□ 0.14
SMAD9-201ENST00000350148 ADGRL1O94910 1474 aa15.9■□□□□ 0.14
SMAD9-201ENST00000350148 ANP32AP39687 249 aaKnown RBP15.89■□□□□ 0.13
SMAD9-201ENST00000350148 MS4A1P11836 297 aa15.89■□□□□ 0.13
SMAD9-201ENST00000350148 STK26Q9P289 416 aa15.89■□□□□ 0.13
SMAD9-201ENST00000350148 CCDC7Q96M83 1385 aa15.89■□□□□ 0.13
SMAD9-201ENST00000350148 RPGRIP1LQ68CZ1 1315 aa15.88■□□□□ 0.13
SMAD9-201ENST00000350148 EVC2Q86UK5 1308 aa15.88■□□□□ 0.13
SMAD9-201ENST00000350148 MYBBP1AQ9BQG0 1328 aaKnown RBP15.88■□□□□ 0.13
SMAD9-201ENST00000350148 ABCC2Q92887 1545 aa15.88■□□□□ 0.13
SMAD9-201ENST00000350148 SHANK2Q9UPX8 1470 aa15.87■□□□□ 0.13
SMAD9-201ENST00000350148 CHMP4BQ9H444 224 aaKnown RBP15.86■□□□□ 0.13
SMAD9-201ENST00000350148 SENP3Q9H4L4 574 aaPredicted RBP15.86■□□□□ 0.13
SMAD9-201ENST00000350148 ANKRD30BQ9BXX2 1392 aa15.86■□□□□ 0.13
SMAD9-201ENST00000350148 SLC52A1Q9NWF4 448 aa15.86■□□□□ 0.13
SMAD9-201ENST00000350148 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
SMAD9-201ENST00000350148 CNTLNQ9NXG0 1405 aa15.85■□□□□ 0.13
SMAD9-201ENST00000350148 FANCAO15360 1455 aa15.85■□□□□ 0.13
SMAD9-201ENST00000350148 PDE3BQ13370 1112 aa15.85■□□□□ 0.13
SMAD9-201ENST00000350148 WDR7Q9Y4E6 1490 aa15.84■□□□□ 0.13
SMAD9-201ENST00000350148 HAP1P54257 671 aaPredicted RBP15.83■□□□□ 0.12
SMAD9-201ENST00000350148 PRKRIP1Q9H875 184 aaPredicted RBP15.83■□□□□ 0.12
SMAD9-201ENST00000350148 UPF2Q9HAU5 1272 aaKnown RBP15.82■□□□□ 0.12
SMAD9-201ENST00000350148 PPP4R2Q9NY27 417 aa15.82■□□□□ 0.12
SMAD9-201ENST00000350148 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
SMAD9-201ENST00000350148 RBM19Q9Y4C8 960 aaKnown RBP15.82■□□□□ 0.12
SMAD9-201ENST00000350148 DUOX2Q9NRD8 1548 aa15.81■□□□□ 0.12
SMAD9-201ENST00000350148 ERBINQ96RT1 1412 aa15.81■□□□□ 0.12
SMAD9-201ENST00000350148 MYH16Q9H6N6 1097 aa15.81■□□□□ 0.12
SMAD9-201ENST00000350148 TRAK1Q9UPV9 953 aa15.81■□□□□ 0.12
SMAD9-201ENST00000350148 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
SMAD9-201ENST00000350148 DENND4BO75064 1496 aaPredicted RBP15.81■□□□□ 0.12
SMAD9-201ENST00000350148 CENPJQ9HC77 1338 aaPredicted RBP15.81■□□□□ 0.12
SMAD9-201ENST00000350148 PPM1GO15355 546 aaPredicted RBP15.81■□□□□ 0.12
SMAD9-201ENST00000350148 SAFB2Q14151 953 aaKnown RBP eCLIP15.81■□□□□ 0.12
SMAD9-201ENST00000350148 WASHC2AQ641Q2 1341 aa15.81■□□□□ 0.12
SMAD9-201ENST00000350148 POGZQ7Z3K3 1410 aa15.8■□□□□ 0.12
SMAD9-201ENST00000350148 NGEFQ8N5V2 710 aa15.8■□□□□ 0.12
SMAD9-201ENST00000350148 KIF7Q2M1P5 1343 aa15.79■□□□□ 0.12
SMAD9-201ENST00000350148 PANK3Q9H999 370 aa15.79■□□□□ 0.12
SMAD9-201ENST00000350148 U2SURPO15042 1029 aaKnown RBP15.79■□□□□ 0.12
SMAD9-201ENST00000350148 RTN4Q9NQC3 1192 aaKnown RBP15.79■□□□□ 0.12
SMAD9-201ENST00000350148 ASXL2Q76L83 1435 aa15.79■□□□□ 0.12
SMAD9-201ENST00000350148 CGNL1Q0VF96 1302 aa15.78■□□□□ 0.12
SMAD9-201ENST00000350148 RPRD2Q5VT52 1461 aaKnown RBP15.78■□□□□ 0.12
SMAD9-201ENST00000350148 DHX29Q7Z478 1369 aaKnown RBP15.78■□□□□ 0.12
SMAD9-201ENST00000350148 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.11
SMAD9-201ENST00000350148 NPM2Q86SE8 214 aaKnown RBP15.77■□□□□ 0.11
SMAD9-201ENST00000350148 DNMT1P26358 1616 aaKnown RBP15.76■□□□□ 0.11
SMAD9-201ENST00000350148 TEX14Q8IWB6 1497 aa15.76■□□□□ 0.11
SMAD9-201ENST00000350148 RTEL1-TNFRSF6BF6WH68 1400 aa15.76■□□□□ 0.11
SMAD9-201ENST00000350148 UHRF1BP1LA0JNW5 1464 aa15.74■□□□□ 0.11
SMAD9-201ENST00000350148 PTPRKQ15262 1439 aa15.74■□□□□ 0.11
SMAD9-201ENST00000350148 ADGRL2O95490 1459 aa15.74■□□□□ 0.11
SMAD9-201ENST00000350148 ZNF518AQ6AHZ1 1483 aa15.73■□□□□ 0.11
SMAD9-201ENST00000350148 CHMP4AQ9BY43 222 aa15.72■□□□□ 0.11
SMAD9-201ENST00000350148 ABCA8O94911 1581 aa15.72■□□□□ 0.11
SMAD9-201ENST00000350148 SYCP2Q9BX26 1530 aa15.71■□□□□ 0.11
SMAD9-201ENST00000350148 ZBTB7CA1YPR0 619 aa15.71■□□□□ 0.11
SMAD9-201ENST00000350148 NUTM2DQ5VT03 806 aaPredicted RBP15.71■□□□□ 0.11
SMAD9-201ENST00000350148 FTSJ3Q8IY81 847 aaKnown RBP15.71■□□□□ 0.11
SMAD9-201ENST00000350148 NBPF8Q3BBV2 869 aa15.71■□□□□ 0.11
SMAD9-201ENST00000350148 RAPGEF3O95398 923 aa15.71■□□□□ 0.11
SMAD9-201ENST00000350148 ABCC10Q5T3U5 1492 aa15.7■□□□□ 0.1
SMAD9-201ENST00000350148 NEUROD2Q15784 382 aa15.7■□□□□ 0.1
SMAD9-201ENST00000350148 BRD4O60885 1362 aaPredicted RBP15.69■□□□□ 0.1
SMAD9-201ENST00000350148 ZBED9Q6R2W3 1325 aa15.69■□□□□ 0.1
SMAD9-201ENST00000350148 U2AF1L5P0DN76 240 aaPredicted RBP15.69■□□□□ 0.1
SMAD9-201ENST00000350148 U2AF1Q01081 240 aaKnown RBP eCLIP15.69■□□□□ 0.1
SMAD9-201ENST00000350148 LMOD3Q0VAK6 560 aa15.69■□□□□ 0.1
SMAD9-201ENST00000350148 FAM135AQ9P2D6 1515 aa15.67■□□□□ 0.1
SMAD9-201ENST00000350148 MAPKBP1O60336 1514 aa15.67■□□□□ 0.1
SMAD9-201ENST00000350148 KDM5BQ9UGL1 1544 aa15.66■□□□□ 0.1
SMAD9-201ENST00000350148 DEKP35659 375 aaKnown RBP15.66■□□□□ 0.1
SMAD9-201ENST00000350148 GOLGA2Q08379 1002 aa15.66■□□□□ 0.1
SMAD9-201ENST00000350148 NGDNQ8NEJ9 315 aaKnown RBP15.66■□□□□ 0.1
SMAD9-201ENST00000350148 RCAN3Q9UKA8 241 aa15.65■□□□□ 0.1
SMAD9-201ENST00000350148 SENP3-EIF4A1A0A087X0R7 540 aa15.65■□□□□ 0.1
SMAD9-201ENST00000350148 ARHGEF5Q12774 1597 aa15.65■□□□□ 0.1
SMAD9-201ENST00000350148 IPO8O15397 1037 aaKnown RBP15.65■□□□□ 0.1
SMAD9-201ENST00000350148 CFAP70Q5T0N1 1121 aa15.65■□□□□ 0.1
SMAD9-201ENST00000350148 LMOD2Q6P5Q4 547 aa15.65■□□□□ 0.1
SMAD9-201ENST00000350148 A2MP01023 1474 aa15.64■□□□□ 0.09
SMAD9-201ENST00000350148 RTF1Q92541 710 aaKnown RBP15.64■□□□□ 0.09
SMAD9-201ENST00000350148 MINK1Q8N4C8 1332 aaPredicted RBP15.63■□□□□ 0.09
SMAD9-201ENST00000350148 COG3Q96JB2 828 aa15.63■□□□□ 0.09
SMAD9-201ENST00000350148 THEMISQ8N1K5 641 aaPredicted RBP15.63■□□□□ 0.09
SMAD9-201ENST00000350148 LAS1LQ9Y4W2 734 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms