RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 DHX29Q7Z478 1369 aaKnown RBP18.24■□□□□ 0.51
CSNK1G3-201ENST00000345990 CANXP27824 592 aaKnown RBP18.24■□□□□ 0.51
CSNK1G3-201ENST00000345990 SENP3Q9H4L4 574 aaPredicted RBP18.22■□□□□ 0.51
CSNK1G3-201ENST00000345990 PNNQ9H307 717 aaKnown RBP18.22■□□□□ 0.51
CSNK1G3-201ENST00000345990 STK26Q9P289 416 aa18.22■□□□□ 0.51
CSNK1G3-201ENST00000345990 RTEL1-TNFRSF6BF6WH68 1400 aa18.22■□□□□ 0.51
CSNK1G3-201ENST00000345990 RALBP1Q15311 655 aa18.21■□□□□ 0.51
CSNK1G3-201ENST00000345990 ABCC10Q5T3U5 1492 aa18.21■□□□□ 0.51
CSNK1G3-201ENST00000345990 ERBINQ96RT1 1412 aa18.21■□□□□ 0.51
CSNK1G3-201ENST00000345990 DUOX2Q9NRD8 1548 aa18.21■□□□□ 0.51
CSNK1G3-201ENST00000345990 KTN1Q86UP2 1357 aaKnown RBP18.2■□□□□ 0.5
CSNK1G3-201ENST00000345990 TERF2IPQ9NYB0 399 aa18.2■□□□□ 0.5
CSNK1G3-201ENST00000345990 USP47Q96K76 1375 aa18.2■□□□□ 0.5
CSNK1G3-201ENST00000345990 ANKRD30BQ9BXX2 1392 aa18.19■□□□□ 0.5
CSNK1G3-201ENST00000345990 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.18■□□□□ 0.5
CSNK1G3-201ENST00000345990 KDM5BQ9UGL1 1544 aa18.18■□□□□ 0.5
CSNK1G3-201ENST00000345990 ERICH6Q7L0X2 663 aa18.17■□□□□ 0.5
CSNK1G3-201ENST00000345990 EVC2Q86UK5 1308 aa18.16■□□□□ 0.5
CSNK1G3-201ENST00000345990 SYCP2Q9BX26 1530 aa18.15■□□□□ 0.5
CSNK1G3-201ENST00000345990 ZBTB47Q9UFB7 747 aaPredicted RBP18.15■□□□□ 0.5
CSNK1G3-201ENST00000345990 ST20-MTHFSA0A0A6YYL1 179 aa18.14■□□□□ 0.49
CSNK1G3-201ENST00000345990 MORC1Q86VD1 984 aa18.13■□□□□ 0.49
CSNK1G3-201ENST00000345990 THEMISQ8N1K5 641 aaPredicted RBP18.12■□□□□ 0.49
CSNK1G3-201ENST00000345990 NEO1Q92859 1461 aa18.12■□□□□ 0.49
CSNK1G3-201ENST00000345990 SAFB2Q14151 953 aaKnown RBP eCLIP18.11■□□□□ 0.49
CSNK1G3-201ENST00000345990 TRAK1Q9UPV9 953 aa18.11■□□□□ 0.49
CSNK1G3-201ENST00000345990 A2MP01023 1474 aa18.11■□□□□ 0.49
CSNK1G3-201ENST00000345990 DNMT1P26358 1616 aaKnown RBP18.1■□□□□ 0.49
CSNK1G3-201ENST00000345990 CFAP74Q9C0B2 1584 aa18.09■□□□□ 0.49
CSNK1G3-201ENST00000345990 ADGRL2O95490 1459 aa18.09■□□□□ 0.49
CSNK1G3-201ENST00000345990 HAP1P54257 671 aaPredicted RBP18.09■□□□□ 0.49
CSNK1G3-201ENST00000345990 CC2D1BQ5T0F9 858 aaKnown RBP18.08■□□□□ 0.49
CSNK1G3-201ENST00000345990 CENPJQ9HC77 1338 aaPredicted RBP18.08■□□□□ 0.49
CSNK1G3-201ENST00000345990 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.49
CSNK1G3-201ENST00000345990 MAPK8IP3Q9UPT6 1336 aa18.08■□□□□ 0.49
CSNK1G3-201ENST00000345990 NUTM2DQ5VT03 806 aaPredicted RBP18.07■□□□□ 0.48
CSNK1G3-201ENST00000345990 TRAPPC8Q9Y2L5 1435 aa18.06■□□□□ 0.48
CSNK1G3-201ENST00000345990 PTPRKQ15262 1439 aa18.05■□□□□ 0.48
CSNK1G3-201ENST00000345990 MAPKBP1O60336 1514 aa18.05■□□□□ 0.48
CSNK1G3-201ENST00000345990 GTF3C3Q9Y5Q9 886 aa18.04■□□□□ 0.48
CSNK1G3-201ENST00000345990 ARHGEF5Q12774 1597 aa18.04■□□□□ 0.48
CSNK1G3-201ENST00000345990 CLASP1Q7Z460 1538 aa18.04■□□□□ 0.48
CSNK1G3-201ENST00000345990 DAXXQ9UER7 740 aaPredicted RBP18.03■□□□□ 0.48
CSNK1G3-201ENST00000345990 NLRP13Q86W25 1043 aa18.02■□□□□ 0.47
CSNK1G3-201ENST00000345990 RPRD2Q5VT52 1461 aaKnown RBP18.01■□□□□ 0.47
CSNK1G3-201ENST00000345990 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
CSNK1G3-201ENST00000345990 MYO5CQ9NQX4 1742 aa17.99■□□□□ 0.47
CSNK1G3-201ENST00000345990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.99■□□□□ 0.47
CSNK1G3-201ENST00000345990 TXNDC2Q86VQ3 553 aa17.99■□□□□ 0.47
CSNK1G3-201ENST00000345990 MAGI3Q5TCQ9 1506 aa17.99■□□□□ 0.47
CSNK1G3-201ENST00000345990 LMOD2Q6P5Q4 547 aa17.99■□□□□ 0.47
CSNK1G3-201ENST00000345990 SALL2Q9Y467 1007 aaPredicted RBP17.99■□□□□ 0.47
CSNK1G3-201ENST00000345990 CCDC7Q96M83 1385 aa17.98■□□□□ 0.47
CSNK1G3-201ENST00000345990 CGNL1Q0VF96 1302 aa17.98■□□□□ 0.47
CSNK1G3-201ENST00000345990 NGDNQ8NEJ9 315 aaKnown RBP17.98■□□□□ 0.47
CSNK1G3-201ENST00000345990 ZBTB7CA1YPR0 619 aa17.97■□□□□ 0.47
CSNK1G3-201ENST00000345990 ARAP3Q8WWN8 1544 aa17.97■□□□□ 0.47
CSNK1G3-201ENST00000345990 ATP7AQ04656 1500 aa17.96■□□□□ 0.47
CSNK1G3-201ENST00000345990 ZCCHC11Q5TAX3 1644 aaKnown RBP17.96■□□□□ 0.47
CSNK1G3-201ENST00000345990 FAM135AQ9P2D6 1515 aa17.95■□□□□ 0.46
CSNK1G3-201ENST00000345990 CFAP70Q5T0N1 1121 aa17.95■□□□□ 0.46
CSNK1G3-201ENST00000345990 WASHC2AQ641Q2 1341 aa17.95■□□□□ 0.46
CSNK1G3-201ENST00000345990 ANKLE2Q86XL3 938 aa17.94■□□□□ 0.46
CSNK1G3-201ENST00000345990 PANK3Q9H999 370 aa17.94■□□□□ 0.46
CSNK1G3-201ENST00000345990 MYBBP1AQ9BQG0 1328 aaKnown RBP17.94■□□□□ 0.46
CSNK1G3-201ENST00000345990 U2SURPO15042 1029 aaKnown RBP17.93■□□□□ 0.46
CSNK1G3-201ENST00000345990 TNNT2P45379 298 aaPredicted RBP17.93■□□□□ 0.46
CSNK1G3-201ENST00000345990 ATP10AO60312 1499 aa17.92■□□□□ 0.46
CSNK1G3-201ENST00000345990 CNTLNQ9NXG0 1405 aa17.92■□□□□ 0.46
CSNK1G3-201ENST00000345990 MINK1Q8N4C8 1332 aaPredicted RBP17.92■□□□□ 0.46
CSNK1G3-201ENST00000345990 CALD1Q05682 793 aaKnown RBP17.92■□□□□ 0.46
CSNK1G3-201ENST00000345990 ADCY10Q96PN6 1610 aa17.91■□□□□ 0.46
CSNK1G3-201ENST00000345990 KIF7Q2M1P5 1343 aa17.9■□□□□ 0.46
CSNK1G3-201ENST00000345990 NBPF8Q3BBV2 869 aa17.9■□□□□ 0.46
CSNK1G3-201ENST00000345990 SHROOM2Q13796 1616 aa17.89■□□□□ 0.46
CSNK1G3-201ENST00000345990 PREX2Q70Z35 1606 aa17.89■□□□□ 0.45
CSNK1G3-201ENST00000345990 MAGI2Q86UL8 1455 aa17.89■□□□□ 0.45
CSNK1G3-201ENST00000345990 ADGBQ8N7X0 1667 aa17.89■□□□□ 0.45
CSNK1G3-201ENST00000345990 MS4A1P11836 297 aa17.88■□□□□ 0.45
CSNK1G3-201ENST00000345990 MBD5Q9P267 1494 aa17.88■□□□□ 0.45
CSNK1G3-201ENST00000345990 NGEFQ8N5V2 710 aa17.88■□□□□ 0.45
CSNK1G3-201ENST00000345990 PAK3O75914 559 aaPredicted RBP17.87■□□□□ 0.45
CSNK1G3-201ENST00000345990 FKBP8Q14318 412 aa17.87■□□□□ 0.45
CSNK1G3-201ENST00000345990 PRKRIP1Q9H875 184 aaPredicted RBP17.87■□□□□ 0.45
CSNK1G3-201ENST00000345990 ERCC6L2Q5T890 1561 aa17.87■□□□□ 0.45
CSNK1G3-201ENST00000345990 CHMP4AQ9BY43 222 aa17.87■□□□□ 0.45
CSNK1G3-201ENST00000345990 TNRQ92752 1358 aa17.87■□□□□ 0.45
CSNK1G3-201ENST00000345990 COG3Q96JB2 828 aa17.86■□□□□ 0.45
CSNK1G3-201ENST00000345990 CHMP4BQ9H444 224 aaKnown RBP17.86■□□□□ 0.45
CSNK1G3-201ENST00000345990 IDI1Q13907 227 aa17.86■□□□□ 0.45
CSNK1G3-201ENST00000345990 NPM2Q86SE8 214 aaKnown RBP17.86■□□□□ 0.45
CSNK1G3-201ENST00000345990 TMEM132EQ6IEE7 984 aa17.84■□□□□ 0.45
CSNK1G3-201ENST00000345990 NBPF1Q3BBV0 1214 aa17.84■□□□□ 0.45
CSNK1G3-201ENST00000345990 ABCC1P33527 1531 aa17.84■□□□□ 0.45
CSNK1G3-201ENST00000345990 MLH3Q9UHC1 1453 aa17.84■□□□□ 0.45
CSNK1G3-201ENST00000345990 GCC2Q8IWJ2 1684 aa17.83■□□□□ 0.45
CSNK1G3-201ENST00000345990 PDE3BQ13370 1112 aa17.83■□□□□ 0.44
CSNK1G3-201ENST00000345990 ATAD2Q6PL18 1390 aa17.83■□□□□ 0.44
CSNK1G3-201ENST00000345990 U2AF1L5P0DN76 240 aaPredicted RBP17.82■□□□□ 0.44
CSNK1G3-201ENST00000345990 U2AF1Q01081 240 aaKnown RBP eCLIP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms