RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 CRBNQ96SW2 442 aa13.87□□□□□ -0.19
RPL28-201ENST00000344063 NAIPQ13075 1403 aa13.87□□□□□ -0.19
RPL28-201ENST00000344063 ANKRD50Q9ULJ7 1429 aa13.86□□□□□ -0.19
RPL28-201ENST00000344063 HSCBQ8IWL3 235 aa13.86□□□□□ -0.19
RPL28-201ENST00000344063 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
RPL28-201ENST00000344063 PCF11O94913 1555 aaKnown RBP13.86□□□□□ -0.19
RPL28-201ENST00000344063 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
RPL28-201ENST00000344063 PLCB2Q00722 1185 aa13.84□□□□□ -0.19
RPL28-201ENST00000344063 MSNP26038 577 aaKnown RBP13.84□□□□□ -0.19
RPL28-201ENST00000344063 ABCA10Q8WWZ4 1543 aa13.84□□□□□ -0.19
RPL28-201ENST00000344063 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
RPL28-201ENST00000344063 PTPRGP23470 1445 aa13.84□□□□□ -0.19
RPL28-201ENST00000344063 SUPT6HQ7KZ85 1726 aaKnown RBP13.84□□□□□ -0.19
RPL28-201ENST00000344063 CENPQQ7L2Z9 268 aaPredicted RBP13.84□□□□□ -0.19
RPL28-201ENST00000344063 BRD4O60885 1362 aaPredicted RBP13.84□□□□□ -0.19
RPL28-201ENST00000344063 GRIN2BQ13224 1484 aa13.83□□□□□ -0.19
RPL28-201ENST00000344063 CASC1Q6TDU7 716 aa13.83□□□□□ -0.2
RPL28-201ENST00000344063 RWDD1Q9H446 243 aaPredicted RBP13.83□□□□□ -0.2
RPL28-201ENST00000344063 PMFBP1Q8TBY8 1022 aa13.83□□□□□ -0.2
RPL28-201ENST00000344063 AKNAQ7Z591 1439 aa13.82□□□□□ -0.2
RPL28-201ENST00000344063 KIF3BO15066 747 aa13.82□□□□□ -0.2
RPL28-201ENST00000344063 SRPK2P78362 688 aaKnown RBP13.82□□□□□ -0.2
RPL28-201ENST00000344063 NBPF8Q3BBV2 869 aa13.82□□□□□ -0.2
RPL28-201ENST00000344063 CENPJQ9HC77 1338 aaPredicted RBP13.81□□□□□ -0.2
RPL28-201ENST00000344063 U2AF1L5P0DN76 240 aaPredicted RBP13.81□□□□□ -0.2
RPL28-201ENST00000344063 U2AF1Q01081 240 aaKnown RBP eCLIP13.81□□□□□ -0.2
RPL28-201ENST00000344063 FAM161AQ3B820 660 aa13.81□□□□□ -0.2
RPL28-201ENST00000344063 HECW1Q76N89 1606 aa13.81□□□□□ -0.2
RPL28-201ENST00000344063 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
RPL28-201ENST00000344063 UNC13AQ9UPW8 1703 aa13.81□□□□□ -0.2
RPL28-201ENST00000344063 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
RPL28-201ENST00000344063 MFAP1P55081 439 aaKnown RBP13.8□□□□□ -0.2
RPL28-201ENST00000344063 FOXD4L1Q9NU39 408 aa13.8□□□□□ -0.2
RPL28-201ENST00000344063 CCDC146Q8IYE0 955 aa13.8□□□□□ -0.2
RPL28-201ENST00000344063 NESP48681 1621 aa13.8□□□□□ -0.2
RPL28-201ENST00000344063 GGT6Q6P531 493 aa13.8□□□□□ -0.2
RPL28-201ENST00000344063 CLUAP1Q96AJ1 413 aa13.79□□□□□ -0.2
RPL28-201ENST00000344063 KIAA1107Q9UPP5 1409 aa13.79□□□□□ -0.2
RPL28-201ENST00000344063 FRAT2O75474 233 aaPredicted RBP13.79□□□□□ -0.2
RPL28-201ENST00000344063 NGEFQ8N5V2 710 aa13.78□□□□□ -0.2
RPL28-201ENST00000344063 STAC3Q96MF2 364 aa13.77□□□□□ -0.2
RPL28-201ENST00000344063 CUL7Q14999 1698 aa13.77□□□□□ -0.21
RPL28-201ENST00000344063 E9PSI1 815 aa13.77□□□□□ -0.21
RPL28-201ENST00000344063 ROCK1Q13464 1354 aa13.77□□□□□ -0.21
RPL28-201ENST00000344063 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
RPL28-201ENST00000344063 DAPK1P53355 1430 aa13.76□□□□□ -0.21
RPL28-201ENST00000344063 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
RPL28-201ENST00000344063 HDGFL2Q7Z4V5 671 aaPredicted RBP13.76□□□□□ -0.21
RPL28-201ENST00000344063 SAFB2Q14151 953 aaKnown RBP eCLIP13.75□□□□□ -0.21
RPL28-201ENST00000344063 TROQ12816 1431 aaPredicted RBP13.75□□□□□ -0.21
RPL28-201ENST00000344063 CGNL1Q0VF96 1302 aa13.75□□□□□ -0.21
RPL28-201ENST00000344063 SKAP1Q86WV1 359 aa13.75□□□□□ -0.21
RPL28-201ENST00000344063 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
RPL28-201ENST00000344063 WASHC2CQ9Y4E1 1318 aa13.74□□□□□ -0.21
RPL28-201ENST00000344063 EPRSP07814 1512 aaKnown RBP13.74□□□□□ -0.21
RPL28-201ENST00000344063 SMG6Q86US8 1419 aaKnown RBP13.74□□□□□ -0.21
RPL28-201ENST00000344063 CALD1Q05682 793 aaKnown RBP13.74□□□□□ -0.21
RPL28-201ENST00000344063 PNISRQ8TF01 805 aaKnown RBP13.73□□□□□ -0.21
RPL28-201ENST00000344063 CDCA7LQ96GN5 454 aa13.73□□□□□ -0.21
RPL28-201ENST00000344063 MAPKBP1O60336 1514 aa13.73□□□□□ -0.21
RPL28-201ENST00000344063 ITPRIPQ8IWB1 547 aa13.72□□□□□ -0.21
RPL28-201ENST00000344063 STK26Q9P289 416 aa13.72□□□□□ -0.21
RPL28-201ENST00000344063 PTPN23Q9H3S7 1636 aa13.72□□□□□ -0.21
RPL28-201ENST00000344063 SMC4Q9NTJ3 1288 aa13.72□□□□□ -0.21
RPL28-201ENST00000344063 APAF1O14727 1248 aa13.71□□□□□ -0.21
RPL28-201ENST00000344063 PKNOX2Q96KN3 472 aa13.71□□□□□ -0.21
RPL28-201ENST00000344063 GBP4Q96PP9 640 aa13.71□□□□□ -0.21
RPL28-201ENST00000344063 BCL2L13Q9BXK5 485 aa13.71□□□□□ -0.21
RPL28-201ENST00000344063 BACH2Q9BYV9 841 aa13.7□□□□□ -0.22
RPL28-201ENST00000344063 TERF2IPQ9NYB0 399 aa13.7□□□□□ -0.22
RPL28-201ENST00000344063 ANKRD30BQ9BXX2 1392 aa13.7□□□□□ -0.22
RPL28-201ENST00000344063 C14orf37Q86TY3 774 aa13.7□□□□□ -0.22
RPL28-201ENST00000344063 C9orf84Q5VXU9 1444 aa13.69□□□□□ -0.22
RPL28-201ENST00000344063 TRAK1Q9UPV9 953 aa13.69□□□□□ -0.22
RPL28-201ENST00000344063 COG6Q9Y2V7 657 aa13.69□□□□□ -0.22
RPL28-201ENST00000344063 PRG4Q92954 1404 aaPredicted RBP13.69□□□□□ -0.22
RPL28-201ENST00000344063 PTMSP20962 102 aa13.68□□□□□ -0.22
RPL28-201ENST00000344063 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
RPL28-201ENST00000344063 CDK13Q14004 1512 aaKnown RBP13.68□□□□□ -0.22
RPL28-201ENST00000344063 MRC2Q9UBG0 1479 aa13.68□□□□□ -0.22
RPL28-201ENST00000344063 APBB1O00213 710 aa13.67□□□□□ -0.22
RPL28-201ENST00000344063 HDGFP51858 240 aaKnown RBP13.67□□□□□ -0.22
RPL28-201ENST00000344063 CDK11BP21127 795 aaKnown RBP13.67□□□□□ -0.22
RPL28-201ENST00000344063 IQGAP2Q13576 1575 aa13.67□□□□□ -0.22
RPL28-201ENST00000344063 SYNJ2O15056 1496 aa13.66□□□□□ -0.22
RPL28-201ENST00000344063 NCOA1Q15788 1441 aa13.66□□□□□ -0.22
RPL28-201ENST00000344063 RRP7AQ9Y3A4 280 aaKnown RBP13.66□□□□□ -0.22
RPL28-201ENST00000344063 KIAA0586Q9BVV6 1533 aa13.66□□□□□ -0.22
RPL28-201ENST00000344063 C11orf95C9JLR9 678 aaPredicted RBP13.65□□□□□ -0.22
RPL28-201ENST00000344063 ADAMTS8Q9UP79 889 aa13.65□□□□□ -0.22
RPL28-201ENST00000344063 LAMC3Q9Y6N6 1575 aa13.64□□□□□ -0.23
RPL28-201ENST00000344063 ZKSCAN2Q63HK3 967 aa13.64□□□□□ -0.23
RPL28-201ENST00000344063 FAM13BQ9NYF5 915 aa13.64□□□□□ -0.23
RPL28-201ENST00000344063 TRHP20396 242 aaPredicted RBP13.63□□□□□ -0.23
RPL28-201ENST00000344063 RPRD2Q5VT52 1461 aaKnown RBP13.63□□□□□ -0.23
RPL28-201ENST00000344063 ABCC5O15440 1437 aa13.63□□□□□ -0.23
RPL28-201ENST00000344063 NBPF1Q3BBV0 1214 aa13.63□□□□□ -0.23
RPL28-201ENST00000344063 FOXD4L5Q5VV16 416 aaPredicted RBP13.63□□□□□ -0.23
RPL28-201ENST00000344063 FOXD4L4Q8WXT5 416 aaPredicted RBP13.63□□□□□ -0.23
RPL28-201ENST00000344063 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms