RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 ERICH6BQ5W0A0 696 aa16.47■□□□□ 0.23
LMX1A-202ENST00000342310 CLUAP1Q96AJ1 413 aa16.47■□□□□ 0.23
LMX1A-202ENST00000342310 HECW1Q76N89 1606 aa16.47■□□□□ 0.23
LMX1A-202ENST00000342310 DENND4BO75064 1496 aaPredicted RBP16.46■□□□□ 0.23
LMX1A-202ENST00000342310 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
LMX1A-202ENST00000342310 NUP153P49790 1475 aaKnown RBP16.46■□□□□ 0.22
LMX1A-202ENST00000342310 APAF1O14727 1248 aa16.45■□□□□ 0.22
LMX1A-202ENST00000342310 PPM1GO15355 546 aaPredicted RBP16.45■□□□□ 0.22
LMX1A-202ENST00000342310 CTTNBP2Q8WZ74 1663 aa16.45■□□□□ 0.22
LMX1A-202ENST00000342310 C9orf84Q5VXU9 1444 aa16.45■□□□□ 0.22
LMX1A-202ENST00000342310 CAMSAP2Q08AD1 1489 aa16.45■□□□□ 0.22
LMX1A-202ENST00000342310 ANO8Q9HCE9 1232 aaPredicted RBP16.45■□□□□ 0.22
LMX1A-202ENST00000342310 SPRYD3Q8NCJ5 442 aa16.44■□□□□ 0.22
LMX1A-202ENST00000342310 TRAK1Q9UPV9 953 aa16.44■□□□□ 0.22
LMX1A-202ENST00000342310 STK26Q9P289 416 aa16.44■□□□□ 0.22
LMX1A-202ENST00000342310 IL27Q8NEV9 243 aa16.42■□□□□ 0.22
LMX1A-202ENST00000342310 MRC2Q9UBG0 1479 aa16.41■□□□□ 0.22
LMX1A-202ENST00000342310 KIAA0586Q9BVV6 1533 aa16.4■□□□□ 0.22
LMX1A-202ENST00000342310 CFAP70Q5T0N1 1121 aa16.4■□□□□ 0.22
LMX1A-202ENST00000342310 GPATCH8Q9UKJ3 1502 aaKnown RBP16.39■□□□□ 0.21
LMX1A-202ENST00000342310 DHX29Q7Z478 1369 aaKnown RBP16.39■□□□□ 0.21
LMX1A-202ENST00000342310 TMEM132EQ6IEE7 984 aa16.39■□□□□ 0.21
LMX1A-202ENST00000342310 KIF21AQ7Z4S6 1674 aa16.38■□□□□ 0.21
LMX1A-202ENST00000342310 EFCAB2Q5VUJ9 269 aa16.38■□□□□ 0.21
LMX1A-202ENST00000342310 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
LMX1A-202ENST00000342310 SPAG9O60271 1321 aaKnown RBP16.37■□□□□ 0.21
LMX1A-202ENST00000342310 U2SURPO15042 1029 aaKnown RBP16.37■□□□□ 0.21
LMX1A-202ENST00000342310 BCAR3O75815 825 aa16.36■□□□□ 0.21
LMX1A-202ENST00000342310 GRIN2AQ12879 1464 aa16.36■□□□□ 0.21
LMX1A-202ENST00000342310 GOLGA2Q08379 1002 aa16.36■□□□□ 0.21
LMX1A-202ENST00000342310 SMG6Q86US8 1419 aaKnown RBP16.35■□□□□ 0.21
LMX1A-202ENST00000342310 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.35■□□□□ 0.21
LMX1A-202ENST00000342310 PZPP20742 1482 aa16.35■□□□□ 0.21
LMX1A-202ENST00000342310 COG6Q9Y2V7 657 aa16.35■□□□□ 0.21
LMX1A-202ENST00000342310 DISP3Q9P2K9 1392 aa16.34■□□□□ 0.21
LMX1A-202ENST00000342310 SLKQ9H2G2 1235 aaPredicted RBP16.34■□□□□ 0.21
LMX1A-202ENST00000342310 TEX14Q8IWB6 1497 aa16.34■□□□□ 0.21
LMX1A-202ENST00000342310 TCERG1O14776 1098 aaKnown RBP16.33■□□□□ 0.2
LMX1A-202ENST00000342310 MORC1Q86VD1 984 aa16.33■□□□□ 0.2
LMX1A-202ENST00000342310 KDM5BQ9UGL1 1544 aa16.32■□□□□ 0.2
LMX1A-202ENST00000342310 PLEKHG5O94827 1062 aa16.32■□□□□ 0.2
LMX1A-202ENST00000342310 SAMD9Q5K651 1589 aa16.32■□□□□ 0.2
LMX1A-202ENST00000342310 DISP1Q96F81 1524 aa16.32■□□□□ 0.2
LMX1A-202ENST00000342310 PPP2R1AP30153 589 aa16.32■□□□□ 0.2
LMX1A-202ENST00000342310 STAG3Q9UJ98 1225 aa16.32■□□□□ 0.2
LMX1A-202ENST00000342310 PANK1Q8TE04 598 aa16.31■□□□□ 0.2
LMX1A-202ENST00000342310 WDR62O43379 1518 aa16.31■□□□□ 0.2
LMX1A-202ENST00000342310 TCOF1Q13428 1488 aaKnown RBP16.31■□□□□ 0.2
LMX1A-202ENST00000342310 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
LMX1A-202ENST00000342310 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
LMX1A-202ENST00000342310 BRD4O60885 1362 aaPredicted RBP16.3■□□□□ 0.2
LMX1A-202ENST00000342310 NPM1P06748 294 aaKnown RBP eCLIP16.3■□□□□ 0.2
LMX1A-202ENST00000342310 SPATA31E1Q6ZUB1 1445 aa16.3■□□□□ 0.2
LMX1A-202ENST00000342310 LRRIQ1Q96JM4 1722 aa16.29■□□□□ 0.2
LMX1A-202ENST00000342310 SLC24A1O60721 1099 aa16.29■□□□□ 0.2
LMX1A-202ENST00000342310 U2AF1L5P0DN76 240 aaPredicted RBP16.28■□□□□ 0.2
LMX1A-202ENST00000342310 U2AF1Q01081 240 aaKnown RBP eCLIP16.28■□□□□ 0.2
LMX1A-202ENST00000342310 MAGI1Q96QZ7 1491 aaPredicted RBP16.27■□□□□ 0.2
LMX1A-202ENST00000342310 SLC12A5Q9H2X9 1139 aa16.27■□□□□ 0.2
LMX1A-202ENST00000342310 MLECQ14165 292 aa16.27■□□□□ 0.19
LMX1A-202ENST00000342310 CDCA8Q53HL2 280 aa16.27■□□□□ 0.19
LMX1A-202ENST00000342310 PLEKHH2Q8IVE3 1493 aa16.26■□□□□ 0.19
LMX1A-202ENST00000342310 ARHGAP5Q13017 1502 aa16.26■□□□□ 0.19
LMX1A-202ENST00000342310 SOX12O15370 315 aa16.26■□□□□ 0.19
LMX1A-202ENST00000342310 ATP10BO94823 1461 aa16.26■□□□□ 0.19
LMX1A-202ENST00000342310 KIF14Q15058 1648 aa16.26■□□□□ 0.19
LMX1A-202ENST00000342310 SRPK2P78362 688 aaKnown RBP16.25■□□□□ 0.19
LMX1A-202ENST00000342310 PDE3BQ13370 1112 aa16.25■□□□□ 0.19
LMX1A-202ENST00000342310 PER1O15534 1290 aaPredicted RBP16.24■□□□□ 0.19
LMX1A-202ENST00000342310 TESK2Q96S53 571 aa16.24■□□□□ 0.19
LMX1A-202ENST00000342310 BACH2Q9BYV9 841 aa16.24■□□□□ 0.19
LMX1A-202ENST00000342310 SPINK5Q9NQ38 1064 aaPredicted RBP16.24■□□□□ 0.19
LMX1A-202ENST00000342310 ELL2O00472 640 aaPredicted RBP16.22■□□□□ 0.19
LMX1A-202ENST00000342310 RSPH4AQ5TD94 716 aa16.22■□□□□ 0.19
LMX1A-202ENST00000342310 FTSJ3Q8IY81 847 aaKnown RBP16.22■□□□□ 0.19
LMX1A-202ENST00000342310 ADAMTS12P58397 1594 aa16.22■□□□□ 0.19
LMX1A-202ENST00000342310 RAPGEF6Q8TEU7 1601 aa16.21■□□□□ 0.19
LMX1A-202ENST00000342310 ARID4BQ4LE39 1312 aaPredicted RBP16.21■□□□□ 0.18
LMX1A-202ENST00000342310 TARBP1Q13395 1621 aaKnown RBP16.2■□□□□ 0.18
LMX1A-202ENST00000342310 BRPF3Q9ULD4 1205 aa16.2■□□□□ 0.18
LMX1A-202ENST00000342310 KIAA0556O60303 1618 aa16.2■□□□□ 0.18
LMX1A-202ENST00000342310 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
LMX1A-202ENST00000342310 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
LMX1A-202ENST00000342310 ERBINQ96RT1 1412 aa16.19■□□□□ 0.18
LMX1A-202ENST00000342310 NUTM2FA1L443 756 aa16.19■□□□□ 0.18
LMX1A-202ENST00000342310 GZF1Q9H116 711 aaPredicted RBP16.19■□□□□ 0.18
LMX1A-202ENST00000342310 TNNQ9UQP3 1299 aa16.18■□□□□ 0.18
LMX1A-202ENST00000342310 CABP2Q9NPB3 220 aa16.18■□□□□ 0.18
LMX1A-202ENST00000342310 ADGRF5Q8IZF2 1346 aa16.18■□□□□ 0.18
LMX1A-202ENST00000342310 DDRGK1Q96HY6 314 aa16.18■□□□□ 0.18
LMX1A-202ENST00000342310 POGKQ9P215 609 aa16.18■□□□□ 0.18
LMX1A-202ENST00000342310 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.17■□□□□ 0.18
LMX1A-202ENST00000342310 CENPJQ9HC77 1338 aaPredicted RBP16.17■□□□□ 0.18
LMX1A-202ENST00000342310 FBLN1P23142 703 aa16.16■□□□□ 0.18
LMX1A-202ENST00000342310 GGNBP2Q9H3C7 697 aa16.16■□□□□ 0.18
LMX1A-202ENST00000342310 SCAPERQ9BY12 1400 aa16.16■□□□□ 0.18
LMX1A-202ENST00000342310 MTHFSP49914 203 aa16.16■□□□□ 0.18
LMX1A-202ENST00000342310 WASHC2CQ9Y4E1 1318 aa16.16■□□□□ 0.18
LMX1A-202ENST00000342310 TSR2Q969E8 191 aaKnown RBP16.15■□□□□ 0.18
LMX1A-202ENST00000342310 UPF2Q9HAU5 1272 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms