RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 B4GALNT3Q6L9W6 998 aa9.69□□□□□ -0.86
ATP2B4-201ENST00000341360 CGNL1Q0VF96 1302 aa9.69□□□□□ -0.86
ATP2B4-201ENST00000341360 ZBED9Q6R2W3 1325 aa9.69□□□□□ -0.86
ATP2B4-201ENST00000341360 LRRFIP1Q32MZ4 808 aaKnown RBP9.68□□□□□ -0.86
ATP2B4-201ENST00000341360 GRIN2BQ13224 1484 aa9.68□□□□□ -0.86
ATP2B4-201ENST00000341360 FGD5Q6ZNL6 1462 aa9.68□□□□□ -0.86
ATP2B4-201ENST00000341360 SOX12O15370 315 aa9.68□□□□□ -0.86
ATP2B4-201ENST00000341360 L3MBTL2Q969R5 705 aa9.67□□□□□ -0.86
ATP2B4-201ENST00000341360 RCAN3Q9UKA8 241 aa9.67□□□□□ -0.86
ATP2B4-201ENST00000341360 IGF1RP08069 1367 aa9.67□□□□□ -0.86
ATP2B4-201ENST00000341360 PLEKHH2Q8IVE3 1493 aa9.67□□□□□ -0.86
ATP2B4-201ENST00000341360 TAF7LQ5H9L4 462 aa9.67□□□□□ -0.86
ATP2B4-201ENST00000341360 GORABQ5T7V8 394 aa9.67□□□□□ -0.86
ATP2B4-201ENST00000341360 WWC1Q8IX03 1113 aa9.67□□□□□ -0.86
ATP2B4-201ENST00000341360 TCERG1O14776 1098 aaKnown RBP9.67□□□□□ -0.86
ATP2B4-201ENST00000341360 CHAF1AQ13111 956 aaPredicted RBP9.67□□□□□ -0.86
ATP2B4-201ENST00000341360 BIVM-ERCC5R4GMW8 1640 aa9.66□□□□□ -0.86
ATP2B4-201ENST00000341360 COG3Q96JB2 828 aa9.66□□□□□ -0.86
ATP2B4-201ENST00000341360 CSPP1Q1MSJ5 1256 aa9.66□□□□□ -0.86
ATP2B4-201ENST00000341360 GNL2Q13823 731 aaKnown RBP9.66□□□□□ -0.86
ATP2B4-201ENST00000341360 IPO9Q96P70 1041 aaKnown RBP9.66□□□□□ -0.86
ATP2B4-201ENST00000341360 NAP1L2Q9ULW6 460 aaPredicted RBP9.66□□□□□ -0.86
ATP2B4-201ENST00000341360 FYCO1Q9BQS8 1478 aa9.66□□□□□ -0.86
ATP2B4-201ENST00000341360 HMGB2P26583 209 aaKnown RBP9.65□□□□□ -0.86
ATP2B4-201ENST00000341360 GBP4Q96PP9 640 aa9.65□□□□□ -0.86
ATP2B4-201ENST00000341360 CCDC9Q9Y3X0 531 aaKnown RBP9.65□□□□□ -0.86
ATP2B4-201ENST00000341360 SYAP1Q96A49 352 aaPredicted RBP9.65□□□□□ -0.86
ATP2B4-201ENST00000341360 FGD6Q6ZV73 1430 aa9.65□□□□□ -0.86
ATP2B4-201ENST00000341360 MYBBP1AQ9BQG0 1328 aaKnown RBP9.65□□□□□ -0.87
ATP2B4-201ENST00000341360 USP35Q9P2H5 1018 aa9.65□□□□□ -0.87
ATP2B4-201ENST00000341360 CASKIN1Q8WXD9 1431 aa9.65□□□□□ -0.87
ATP2B4-201ENST00000341360 EFCAB5A4FU69 1503 aa9.65□□□□□ -0.87
ATP2B4-201ENST00000341360 FAM69CQ0P6D2 419 aa9.64□□□□□ -0.87
ATP2B4-201ENST00000341360 WDR97A6NE52 1622 aa9.64□□□□□ -0.87
ATP2B4-201ENST00000341360 MIA2Q96PC5 1412 aa9.64□□□□□ -0.87
ATP2B4-201ENST00000341360 UNC13AQ9UPW8 1703 aa9.64□□□□□ -0.87
ATP2B4-201ENST00000341360 DNTTIP2Q5QJE6 756 aaKnown RBP9.64□□□□□ -0.87
ATP2B4-201ENST00000341360 SMC4Q9NTJ3 1288 aa9.64□□□□□ -0.87
ATP2B4-201ENST00000341360 IFT140Q96RY7 1462 aa9.63□□□□□ -0.87
ATP2B4-201ENST00000341360 CENPJQ9HC77 1338 aaPredicted RBP9.63□□□□□ -0.87
ATP2B4-201ENST00000341360 C1orf141Q5JVX7 400 aa9.63□□□□□ -0.87
ATP2B4-201ENST00000341360 SYNJ2O15056 1496 aa9.63□□□□□ -0.87
ATP2B4-201ENST00000341360 ITPRIPQ8IWB1 547 aa9.63□□□□□ -0.87
ATP2B4-201ENST00000341360 PRKRIP1Q9H875 184 aaPredicted RBP9.63□□□□□ -0.87
ATP2B4-201ENST00000341360 HMGXB3Q12766 1538 aa9.63□□□□□ -0.87
ATP2B4-201ENST00000341360 WASHC2AQ641Q2 1341 aa9.63□□□□□ -0.87
ATP2B4-201ENST00000341360 CNTLNQ9NXG0 1405 aa9.63□□□□□ -0.87
ATP2B4-201ENST00000341360 AAMPQ13685 434 aa9.62□□□□□ -0.87
ATP2B4-201ENST00000341360 CFTRP13569 1480 aa9.62□□□□□ -0.87
ATP2B4-201ENST00000341360 ROCK1Q13464 1354 aa9.61□□□□□ -0.87
ATP2B4-201ENST00000341360 MRC2Q9UBG0 1479 aa9.61□□□□□ -0.87
ATP2B4-201ENST00000341360 G3V3G9 751 aa9.61□□□□□ -0.87
ATP2B4-201ENST00000341360 GTF2E1P29083 439 aaPredicted RBP9.61□□□□□ -0.87
ATP2B4-201ENST00000341360 TPM4P67936 248 aa9.61□□□□□ -0.87
ATP2B4-201ENST00000341360 DCAF8Q5TAQ9 597 aa9.61□□□□□ -0.87
ATP2B4-201ENST00000341360 SCAPERQ9BY12 1400 aa9.61□□□□□ -0.87
ATP2B4-201ENST00000341360 KIAA2012Q0VF49 1180 aa9.61□□□□□ -0.87
ATP2B4-201ENST00000341360 NEXNQ0ZGT2 675 aa9.6□□□□□ -0.87
ATP2B4-201ENST00000341360 TEFQ10587 303 aa9.6□□□□□ -0.87
ATP2B4-201ENST00000341360 HFM1A2PYH4 1435 aa9.6□□□□□ -0.87
ATP2B4-201ENST00000341360 E9PSI1 815 aa9.6□□□□□ -0.87
ATP2B4-201ENST00000341360 ISY1Q9ULR0 285 aaKnown RBP9.6□□□□□ -0.87
ATP2B4-201ENST00000341360 TRAK1Q9UPV9 953 aa9.6□□□□□ -0.87
ATP2B4-201ENST00000341360 FOXD1Q16676 465 aa9.59□□□□□ -0.87
ATP2B4-201ENST00000341360 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.871e-7■■■■□ 23.1
ATP2B4-201ENST00000341360 HSP90B1P14625 803 aaKnown RBP9.59□□□□□ -0.87
ATP2B4-201ENST00000341360 DDX58O95786 925 aaKnown RBP9.59□□□□□ -0.87
ATP2B4-201ENST00000341360 PHF23Q9BUL5 403 aaPredicted RBP9.58□□□□□ -0.88
ATP2B4-201ENST00000341360 EVA1CP58658 441 aa9.58□□□□□ -0.88
ATP2B4-201ENST00000341360 TTC5Q8N0Z6 440 aa9.58□□□□□ -0.88
ATP2B4-201ENST00000341360 MAPKBP1O60336 1514 aa9.58□□□□□ -0.88
ATP2B4-201ENST00000341360 ZNF330Q9Y3S2 320 aaPredicted RBP9.58□□□□□ -0.88
ATP2B4-201ENST00000341360 API5Q9BZZ5 524 aaKnown RBP9.57□□□□□ -0.88
ATP2B4-201ENST00000341360 CCDC7Q96M83 1385 aa9.57□□□□□ -0.88
ATP2B4-201ENST00000341360 USP47Q96K76 1375 aa9.57□□□□□ -0.88
ATP2B4-201ENST00000341360 POGZQ7Z3K3 1410 aa9.57□□□□□ -0.88
ATP2B4-201ENST00000341360 ANKRD50Q9ULJ7 1429 aa9.56□□□□□ -0.88
ATP2B4-201ENST00000341360 DCAF8L1A6NGE4 600 aa9.56□□□□□ -0.88
ATP2B4-201ENST00000341360 AMOTL1Q8IY63 956 aa9.56□□□□□ -0.88
ATP2B4-201ENST00000341360 CPLX2Q6PUV4 134 aaKnown RBP9.56□□□□□ -0.88
ATP2B4-201ENST00000341360 CHMP3Q9Y3E7 222 aa9.56□□□□□ -0.88
ATP2B4-201ENST00000341360 ST20-MTHFSA0A0A6YYL1 179 aa9.56□□□□□ -0.88
ATP2B4-201ENST00000341360 ST18O60284 1047 aa9.56□□□□□ -0.88
ATP2B4-201ENST00000341360 PLCB2Q00722 1185 aa9.56□□□□□ -0.88
ATP2B4-201ENST00000341360 HSP90AB4PQ58FF6 505 aa9.56□□□□□ -0.88
ATP2B4-201ENST00000341360 BICRAQ9NZM4 1560 aa9.56□□□□□ -0.88
ATP2B4-201ENST00000341360 ATF3P18847 181 aa9.55□□□□□ -0.88
ATP2B4-201ENST00000341360 RUFY2Q8WXA3 655 aa9.55□□□□□ -0.88
ATP2B4-201ENST00000341360 ATP6V1DQ9Y5K8 247 aa9.55□□□□□ -0.88
ATP2B4-201ENST00000341360 DIAPH1O60610 1272 aaKnown RBP9.55□□□□□ -0.88
ATP2B4-201ENST00000341360 NOL10Q9BSC4 688 aaKnown RBP9.55□□□□□ -0.88
ATP2B4-201ENST00000341360 ZKSCAN2Q63HK3 967 aa9.55□□□□□ -0.88
ATP2B4-201ENST00000341360 PHF14O94880 888 aa9.54□□□□□ -0.88
ATP2B4-201ENST00000341360 FRAT2O75474 233 aaPredicted RBP9.54□□□□□ -0.88
ATP2B4-201ENST00000341360 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.54□□□□□ -0.88
ATP2B4-201ENST00000341360 PSME1Q06323 249 aa9.54□□□□□ -0.88
ATP2B4-201ENST00000341360 PANK3Q9H999 370 aa9.54□□□□□ -0.88
ATP2B4-201ENST00000341360 MSNP26038 577 aaKnown RBP9.53□□□□□ -0.88
ATP2B4-201ENST00000341360 SLC52A1Q9NWF4 448 aa9.53□□□□□ -0.88
ATP2B4-201ENST00000341360 KIF16BQ96L93 1317 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms