RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 RIMBP3BA6NNM3 1639 aa16.07■□□□□ 0.16
C2orf88-201ENST00000340623 RIMBP3Q9UFD9 1639 aa16.07■□□□□ 0.16
C2orf88-201ENST00000340623 DNMT1P26358 1616 aaKnown RBP16.05■□□□□ 0.16
C2orf88-201ENST00000340623 EID1Q9Y6B2 187 aa16.05■□□□□ 0.16
C2orf88-201ENST00000340623 A2MP01023 1474 aa16.04■□□□□ 0.16
C2orf88-201ENST00000340623 MYO5CQ9NQX4 1742 aa16.04■□□□□ 0.16
C2orf88-201ENST00000340623 VGFO15240 615 aaPredicted RBP16.03■□□□□ 0.16
C2orf88-201ENST00000340623 TRAK1Q9UPV9 953 aa16.03■□□□□ 0.16
C2orf88-201ENST00000340623 FBXO31Q5XUX0 539 aaPredicted RBP16.02■□□□□ 0.15
C2orf88-201ENST00000340623 MBD5Q9P267 1494 aa16.02■□□□□ 0.15
C2orf88-201ENST00000340623 TMF1P82094 1093 aa16.01■□□□□ 0.15
C2orf88-201ENST00000340623 SHANK2Q9UPX8 1470 aa16.01■□□□□ 0.15
C2orf88-201ENST00000340623 CDCA8Q53HL2 280 aa16.01■□□□□ 0.15
C2orf88-201ENST00000340623 LRRIQ1Q96JM4 1722 aa16.01■□□□□ 0.15
C2orf88-201ENST00000340623 CEBPAP49715 358 aaPredicted RBP16.01■□□□□ 0.15
C2orf88-201ENST00000340623 ANKRD30BQ9BXX2 1392 aa16.01■□□□□ 0.15
C2orf88-201ENST00000340623 POGZQ7Z3K3 1410 aa16.01■□□□□ 0.15
C2orf88-201ENST00000340623 DUOX2Q9NRD8 1548 aa16■□□□□ 0.15
C2orf88-201ENST00000340623 PLEKHG5O94827 1062 aa16■□□□□ 0.15
C2orf88-201ENST00000340623 SAMD9LQ8IVG5 1584 aa16■□□□□ 0.15
C2orf88-201ENST00000340623 ST20-MTHFSA0A0A6YYL1 179 aa16■□□□□ 0.15
C2orf88-201ENST00000340623 TSPOAP1O95153 1857 aa16■□□□□ 0.15
C2orf88-201ENST00000340623 NEO1Q92859 1461 aa15.99■□□□□ 0.15
C2orf88-201ENST00000340623 SRPK2P78362 688 aaKnown RBP15.98■□□□□ 0.15
C2orf88-201ENST00000340623 NBPF8Q3BBV2 869 aa15.97■□□□□ 0.15
C2orf88-201ENST00000340623 RTEL1-TNFRSF6BF6WH68 1400 aa15.97■□□□□ 0.15
C2orf88-201ENST00000340623 PRKCSHP14314 528 aaPredicted RBP15.97■□□□□ 0.15
C2orf88-201ENST00000340623 SLC52A1Q9NWF4 448 aa15.97■□□□□ 0.15
C2orf88-201ENST00000340623 ERBINQ96RT1 1412 aa15.97■□□□□ 0.15
C2orf88-201ENST00000340623 PREX2Q70Z35 1606 aa15.96■□□□□ 0.15
C2orf88-201ENST00000340623 ATP7AQ04656 1500 aa15.96■□□□□ 0.15
C2orf88-201ENST00000340623 CFAP70Q5T0N1 1121 aa15.96■□□□□ 0.14
C2orf88-201ENST00000340623 TMEM132EQ6IEE7 984 aa15.95■□□□□ 0.14
C2orf88-201ENST00000340623 FAM9BQ8IZU0 186 aa15.95■□□□□ 0.14
C2orf88-201ENST00000340623 CDC42BPAQ5VT25 1732 aa15.95■□□□□ 0.14
C2orf88-201ENST00000340623 ARHGEF12Q9NZN5 1544 aa15.95■□□□□ 0.14
C2orf88-201ENST00000340623 ADGRL2O95490 1459 aa15.94■□□□□ 0.14
C2orf88-201ENST00000340623 USP47Q96K76 1375 aa15.94■□□□□ 0.14
C2orf88-201ENST00000340623 NBPF1Q3BBV0 1214 aa15.94■□□□□ 0.14
C2orf88-201ENST00000340623 KNSTRNQ9Y448 316 aa15.94■□□□□ 0.14
C2orf88-201ENST00000340623 MAPKBP1O60336 1514 aa15.94■□□□□ 0.14
C2orf88-201ENST00000340623 YEATS2Q9ULM3 1422 aa15.93■□□□□ 0.14
C2orf88-201ENST00000340623 SENP3-EIF4A1A0A087X0R7 540 aa15.93■□□□□ 0.14
C2orf88-201ENST00000340623 IDI1Q13907 227 aa15.93■□□□□ 0.14
C2orf88-201ENST00000340623 MRS2Q9HD23 443 aa15.93■□□□□ 0.14
C2orf88-201ENST00000340623 ABCC1P33527 1531 aa15.92■□□□□ 0.14
C2orf88-201ENST00000340623 ARHGEF5Q12774 1597 aa15.91■□□□□ 0.14
C2orf88-201ENST00000340623 TXNDC2Q86VQ3 553 aa15.9■□□□□ 0.14
C2orf88-201ENST00000340623 NUTM2FA1L443 756 aa15.9■□□□□ 0.14
C2orf88-201ENST00000340623 FAM135AQ9P2D6 1515 aa15.89■□□□□ 0.13
C2orf88-201ENST00000340623 CC2D1BQ5T0F9 858 aaKnown RBP15.89■□□□□ 0.13
C2orf88-201ENST00000340623 EIF3AQ14152 1382 aaKnown RBP15.89■□□□□ 0.13
C2orf88-201ENST00000340623 SLC24A1O60721 1099 aa15.89■□□□□ 0.13
C2orf88-201ENST00000340623 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.88■□□□□ 0.13
C2orf88-201ENST00000340623 TNNT2P45379 298 aaPredicted RBP15.87■□□□□ 0.13
C2orf88-201ENST00000340623 STAC3Q96MF2 364 aa15.87■□□□□ 0.13
C2orf88-201ENST00000340623 SALL2Q9Y467 1007 aaPredicted RBP15.87■□□□□ 0.13
C2orf88-201ENST00000340623 ATP10AO60312 1499 aa15.87■□□□□ 0.13
C2orf88-201ENST00000340623 MINK1Q8N4C8 1332 aaPredicted RBP15.86■□□□□ 0.13
C2orf88-201ENST00000340623 PZPP20742 1482 aa15.86■□□□□ 0.13
C2orf88-201ENST00000340623 PPP6R1Q9UPN7 881 aa15.86■□□□□ 0.13
C2orf88-201ENST00000340623 RPRD2Q5VT52 1461 aaKnown RBP15.85■□□□□ 0.13
C2orf88-201ENST00000340623 THEMISQ8N1K5 641 aaPredicted RBP15.85■□□□□ 0.13
C2orf88-201ENST00000340623 LMOD2Q6P5Q4 547 aa15.85■□□□□ 0.13
C2orf88-201ENST00000340623 CFAP74Q9C0B2 1584 aa15.85■□□□□ 0.13
C2orf88-201ENST00000340623 CDC42BPBQ9Y5S2 1711 aa15.85■□□□□ 0.13
C2orf88-201ENST00000340623 HNRNPUQ00839 825 aaKnown RBP eCLIP15.84■□□□□ 0.13
C2orf88-201ENST00000340623 KDM6BO15054 1643 aa15.84■□□□□ 0.13
C2orf88-201ENST00000340623 ABCA9Q8IUA7 1624 aa15.84■□□□□ 0.13
C2orf88-201ENST00000340623 ZBTB7CA1YPR0 619 aa15.84■□□□□ 0.13
C2orf88-201ENST00000340623 SLC26A8Q96RN1 970 aa15.84■□□□□ 0.13
C2orf88-201ENST00000340623 PPM1GO15355 546 aaPredicted RBP15.82■□□□□ 0.12
C2orf88-201ENST00000340623 ZFYVE16Q7Z3T8 1539 aa15.82■□□□□ 0.12
C2orf88-201ENST00000340623 ADGRF5Q8IZF2 1346 aa15.81■□□□□ 0.12
C2orf88-201ENST00000340623 ARAP3Q8WWN8 1544 aa15.81■□□□□ 0.12
C2orf88-201ENST00000340623 ADGBQ8N7X0 1667 aa15.81■□□□□ 0.12
C2orf88-201ENST00000340623 NEFMP07197 916 aa15.81■□□□□ 0.12
C2orf88-201ENST00000340623 FKBP8Q14318 412 aa15.81■□□□□ 0.12
C2orf88-201ENST00000340623 CENPJQ9HC77 1338 aaPredicted RBP15.8■□□□□ 0.12
C2orf88-201ENST00000340623 ANP32EQ9BTT0 268 aa15.8■□□□□ 0.12
C2orf88-201ENST00000340623 MLH3Q9UHC1 1453 aa15.8■□□□□ 0.12
C2orf88-201ENST00000340623 SOX12O15370 315 aa15.79■□□□□ 0.12
C2orf88-201ENST00000340623 WDR43Q15061 677 aaKnown RBP eCLIP15.79■□□□□ 0.12
C2orf88-201ENST00000340623 RPGRIP1LQ68CZ1 1315 aa15.79■□□□□ 0.12
C2orf88-201ENST00000340623 CFAP65Q6ZU64 1925 aaKnown RBP15.78■□□□□ 0.12
C2orf88-201ENST00000340623 GCC2Q8IWJ2 1684 aa15.78■□□□□ 0.12
C2orf88-201ENST00000340623 ZMYM3Q14202 1370 aa15.77■□□□□ 0.12
C2orf88-201ENST00000340623 TNRQ92752 1358 aa15.77■□□□□ 0.12
C2orf88-201ENST00000340623 IRX6P78412 446 aaPredicted RBP15.76■□□□□ 0.11
C2orf88-201ENST00000340623 HDGFL2Q7Z4V5 671 aaPredicted RBP15.76■□□□□ 0.11
C2orf88-201ENST00000340623 KIF7Q2M1P5 1343 aa15.76■□□□□ 0.11
C2orf88-201ENST00000340623 NOS1P29475 1434 aa15.76■□□□□ 0.11
C2orf88-201ENST00000340623 ERICH6Q7L0X2 663 aa15.75■□□□□ 0.11
C2orf88-201ENST00000340623 HECW2Q9P2P5 1572 aa15.75■□□□□ 0.11
C2orf88-201ENST00000340623 EVC2Q86UK5 1308 aa15.75■□□□□ 0.11
C2orf88-201ENST00000340623 ANKLE2Q86XL3 938 aa15.75■□□□□ 0.11
C2orf88-201ENST00000340623 PANK3Q9H999 370 aa15.75■□□□□ 0.11
C2orf88-201ENST00000340623 PRAM1Q96QH2 718 aa15.74■□□□□ 0.11
C2orf88-201ENST00000340623 WASHC2AQ641Q2 1341 aa15.73■□□□□ 0.11
C2orf88-201ENST00000340623 MORC1Q86VD1 984 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms