RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 TRIM34Q9BYJ4 488 aa15.17■□□□□ 0.02
TPX2-202ENST00000340513 SPDYE4A6NLX3 237 aa15.17■□□□□ 0.02
TPX2-202ENST00000340513 CCDC9Q9Y3X0 531 aaKnown RBP15.16■□□□□ 0.02
TPX2-202ENST00000340513 DNAJC2Q99543 621 aaKnown RBP15.16■□□□□ 0.02
TPX2-202ENST00000340513 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
TPX2-202ENST00000340513 IRX5P78411 483 aaPredicted RBP15.16■□□□□ 0.02
TPX2-202ENST00000340513 OFD1O75665 1012 aa15.15■□□□□ 0.02
TPX2-202ENST00000340513 BECN1Q14457 450 aa15.14■□□□□ 0.01
TPX2-202ENST00000340513 FAM43BQ6ZT52 329 aaPredicted RBP15.14■□□□□ 0.01
TPX2-202ENST00000340513 EP400NLQ6ZTU2 488 aa15.14■□□□□ 0.01
TPX2-202ENST00000340513 XPCQ01831 940 aaPredicted RBP15.12■□□□□ 0.01
TPX2-202ENST00000340513 THOC2Q8NI27 1593 aaKnown RBP15.1■□□□□ 0.01
TPX2-202ENST00000340513 PRR29P0C7W0 189 aa15.1■□□□□ 0.01
TPX2-202ENST00000340513 ZBED9Q6R2W3 1325 aa15.09■□□□□ 0.01
TPX2-202ENST00000340513 URB2Q14146 1524 aaKnown RBP15.09■□□□□ 0.01
TPX2-202ENST00000340513 ZSCAN30Q86W11 494 aa15.09■□□□□ 0.01
TPX2-202ENST00000340513 TRAK2O60296 914 aa15.08■□□□□ 0
TPX2-202ENST00000340513 NUDCQ9Y266 331 aa15.08■□□□□ 0
TPX2-202ENST00000340513 DYNC1I1O14576 645 aa15.07■□□□□ 0
TPX2-202ENST00000340513 ZNF622Q969S3 477 aaKnown RBP eCLIP15.07■□□□□ 04e-12■■□□□ 12
TPX2-202ENST00000340513 LOC102724159A0A0B4J2E5 919 aa15.07■□□□□ 0
TPX2-202ENST00000340513 PWP2Q15269 919 aaKnown RBP15.07■□□□□ 0
TPX2-202ENST00000340513 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
TPX2-202ENST00000340513 TSC1Q92574 1164 aa15.07■□□□□ 0
TPX2-202ENST00000340513 OS9Q13438 667 aaPredicted RBP15.06■□□□□ 0
TPX2-202ENST00000340513 ABCC8Q09428 1581 aa15.06■□□□□ 0
TPX2-202ENST00000340513 MLECQ14165 292 aa15.06■□□□□ 0
TPX2-202ENST00000340513 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.05■□□□□ -0
TPX2-202ENST00000340513 FSD2A1L4K1 749 aa15.04■□□□□ -0
TPX2-202ENST00000340513 BANK1Q8NDB2 785 aa15.04■□□□□ -0
TPX2-202ENST00000340513 TNNT1P13805 278 aa15.04■□□□□ -0
TPX2-202ENST00000340513 WDR97A6NE52 1622 aa15.03■□□□□ -0
TPX2-202ENST00000340513 MPNDQ8N594 471 aa15.03■□□□□ -0
TPX2-202ENST00000340513 TNIKQ9UKE5 1360 aa15.03■□□□□ -0
TPX2-202ENST00000340513 ZNF592Q92610 1267 aa15.03■□□□□ -0
TPX2-202ENST00000340513 FAM177BA6PVY3 158 aa15.02■□□□□ -0
TPX2-202ENST00000340513 RALBP1Q15311 655 aa15.02■□□□□ -0
TPX2-202ENST00000340513 PLCD4Q9BRC7 762 aa15.02□□□□□ -0.01
TPX2-202ENST00000340513 LMOD3Q0VAK6 560 aa15.01□□□□□ -0.01
TPX2-202ENST00000340513 AXDND1Q5T1B0 1012 aaPredicted RBP15.01□□□□□ -0.01
TPX2-202ENST00000340513 ERICH4A6NGS2 130 aa15.01□□□□□ -0.01
TPX2-202ENST00000340513 JARID2Q92833 1246 aaPredicted RBP15.01□□□□□ -0.01
TPX2-202ENST00000340513 TMX1Q9H3N1 280 aa15.01□□□□□ -0.01
TPX2-202ENST00000340513 FAM161AQ3B820 660 aa15□□□□□ -0.01
TPX2-202ENST00000340513 TPRNQ4KMQ1 711 aa15□□□□□ -0.01
TPX2-202ENST00000340513 GPATCH11Q8N954 259 aa15□□□□□ -0.01
TPX2-202ENST00000340513 MCM4P33991 863 aa14.99□□□□□ -0.01
TPX2-202ENST00000340513 PLIN1O60240 522 aa14.99□□□□□ -0.01
TPX2-202ENST00000340513 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
TPX2-202ENST00000340513 CCDC66A2RUB6 948 aa14.99□□□□□ -0.01
TPX2-202ENST00000340513 TIGD1Q96MW7 591 aa14.99□□□□□ -0.01
TPX2-202ENST00000340513 TAOK2Q9UL54 1235 aa14.99□□□□□ -0.01
TPX2-202ENST00000340513 ATP2B3Q16720 1220 aa14.98□□□□□ -0.01
TPX2-202ENST00000340513 UPF2Q9HAU5 1272 aaKnown RBP14.98□□□□□ -0.01
TPX2-202ENST00000340513 TERF1P54274 439 aa14.98□□□□□ -0.01
TPX2-202ENST00000340513 TOPBP1Q92547 1522 aa14.98□□□□□ -0.01
TPX2-202ENST00000340513 VGFO15240 615 aaPredicted RBP14.98□□□□□ -0.01
TPX2-202ENST00000340513 WDR62O43379 1518 aa14.97□□□□□ -0.01
TPX2-202ENST00000340513 PSEN1P49768 467 aa14.97□□□□□ -0.01
TPX2-202ENST00000340513 RAD54L2Q9Y4B4 1467 aa14.96□□□□□ -0.01
TPX2-202ENST00000340513 TRHP20396 242 aaPredicted RBP14.96□□□□□ -0.02
TPX2-202ENST00000340513 NASPP49321 788 aaPredicted RBP14.95□□□□□ -0.02
TPX2-202ENST00000340513 SASS6Q6UVJ0 657 aa14.95□□□□□ -0.02
TPX2-202ENST00000340513 CUX1P39880 1505 aa14.95□□□□□ -0.02
TPX2-202ENST00000340513 CUX2O14529 1486 aa14.95□□□□□ -0.02
TPX2-202ENST00000340513 RBM25P49756 843 aaKnown RBP14.94□□□□□ -0.02
TPX2-202ENST00000340513 CCDC173Q0VFZ6 552 aa14.94□□□□□ -0.02
TPX2-202ENST00000340513 TOMM22Q9NS69 142 aa14.94□□□□□ -0.02
TPX2-202ENST00000340513 TICAM2Q86XR7 235 aa14.93□□□□□ -0.02
TPX2-202ENST00000340513 ZNF608Q9ULD9 1512 aaPredicted RBP14.93□□□□□ -0.02
TPX2-202ENST00000340513 MMP14P50281 582 aa14.93□□□□□ -0.02
TPX2-202ENST00000340513 RRP1P56182 461 aaKnown RBP14.93□□□□□ -0.02
TPX2-202ENST00000340513 CSPP1Q1MSJ5 1256 aa14.92□□□□□ -0.02
TPX2-202ENST00000340513 PRKRIP1Q9H875 184 aaPredicted RBP14.92□□□□□ -0.02
TPX2-202ENST00000340513 GTF2A1P52655 376 aaPredicted RBP14.92□□□□□ -0.02
TPX2-202ENST00000340513 NBPF1Q3BBV0 1214 aa14.92□□□□□ -0.02
TPX2-202ENST00000340513 PANK3Q9H999 370 aa14.92□□□□□ -0.02
TPX2-202ENST00000340513 KANK4Q5T7N3 995 aaPredicted RBP14.91□□□□□ -0.02
TPX2-202ENST00000340513 PDCL2Q8N4E4 241 aa14.91□□□□□ -0.02
TPX2-202ENST00000340513 KIF3AQ9Y496 699 aa14.91□□□□□ -0.02
TPX2-202ENST00000340513 TDRD9Q8NDG6 1382 aaKnown RBP14.9□□□□□ -0.02
TPX2-202ENST00000340513 TONSLQ96HA7 1378 aa14.9□□□□□ -0.02
TPX2-202ENST00000340513 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
TPX2-202ENST00000340513 U2AF2P26368 475 aaKnown RBP eCLIP14.89□□□□□ -0.03
TPX2-202ENST00000340513 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
TPX2-202ENST00000340513 RAB3GAP2Q9H2M9 1393 aa14.89□□□□□ -0.03
TPX2-202ENST00000340513 GAS2L3Q86XJ1 694 aa14.89□□□□□ -0.03
TPX2-202ENST00000340513 SYNJ1O43426 1573 aa14.88□□□□□ -0.03
TPX2-202ENST00000340513 SOGA1O94964 1423 aa14.88□□□□□ -0.03
TPX2-202ENST00000340513 RCAN3Q9UKA8 241 aa14.88□□□□□ -0.03
TPX2-202ENST00000340513 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
TPX2-202ENST00000340513 DNMBPQ6XZF7 1577 aa14.88□□□□□ -0.03
TPX2-202ENST00000340513 GOLIM4O00461 696 aa14.87□□□□□ -0.03
TPX2-202ENST00000340513 AQRO60306 1485 aaKnown RBP eCLIP14.87□□□□□ -0.031e-12■■■■■ 29
TPX2-202ENST00000340513 FAM50AQ14320 339 aaKnown RBP14.87□□□□□ -0.03
TPX2-202ENST00000340513 FBXO3Q9UK99 471 aa14.86□□□□□ -0.03
TPX2-202ENST00000340513 GEMIN8Q9NWZ8 242 aaKnown RBP14.86□□□□□ -0.03
TPX2-202ENST00000340513 GRIPAP1Q4V328 841 aa14.85□□□□□ -0.03
TPX2-202ENST00000340513 SMG6Q86US8 1419 aaKnown RBP14.85□□□□□ -0.03
TPX2-202ENST00000340513 PHF14O94880 888 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms