RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 CNTLNQ9NXG0 1405 aa21.92■■□□□ 1.1
PRDM8-201ENST00000339711 DNMT1P26358 1616 aaKnown RBP21.92■■□□□ 1.1
PRDM8-201ENST00000339711 NBPF1Q3BBV0 1214 aa21.91■■□□□ 1.1
PRDM8-201ENST00000339711 PLCH2O75038 1416 aa21.9■■□□□ 1.1
PRDM8-201ENST00000339711 NUTM2DQ5VT03 806 aaPredicted RBP21.9■■□□□ 1.1
PRDM8-201ENST00000339711 POGKQ9P215 609 aa21.89■■□□□ 1.1
PRDM8-201ENST00000339711 ABCC2Q92887 1545 aa21.88■■□□□ 1.09
PRDM8-201ENST00000339711 SAFB2Q14151 953 aaKnown RBP eCLIP21.88■■□□□ 1.09
PRDM8-201ENST00000339711 ABCA8O94911 1581 aa21.87■■□□□ 1.09
PRDM8-201ENST00000339711 RAPGEF3O95398 923 aa21.87■■□□□ 1.09
PRDM8-201ENST00000339711 C11orf95C9JLR9 678 aaPredicted RBP21.86■■□□□ 1.09
PRDM8-201ENST00000339711 EIF3AQ14152 1382 aaKnown RBP21.86■■□□□ 1.09
PRDM8-201ENST00000339711 SYCP2Q9BX26 1530 aa21.86■■□□□ 1.09
PRDM8-201ENST00000339711 STK26Q9P289 416 aa21.86■■□□□ 1.09
PRDM8-201ENST00000339711 NEFMP07197 916 aa21.85■■□□□ 1.09
PRDM8-201ENST00000339711 STAC3Q96MF2 364 aa21.85■■□□□ 1.09
PRDM8-201ENST00000339711 PANK3Q9H999 370 aa21.85■■□□□ 1.09
PRDM8-201ENST00000339711 CD109Q6YHK3 1445 aa21.83■■□□□ 1.09
PRDM8-201ENST00000339711 TRAK1Q9UPV9 953 aa21.83■■□□□ 1.09
PRDM8-201ENST00000339711 FANCAO15360 1455 aa21.83■■□□□ 1.08
PRDM8-201ENST00000339711 ADGRL1O94910 1474 aa21.83■■□□□ 1.08
PRDM8-201ENST00000339711 TNNT2P45379 298 aaPredicted RBP21.82■■□□□ 1.08
PRDM8-201ENST00000339711 NLRP13Q86W25 1043 aa21.82■■□□□ 1.08
PRDM8-201ENST00000339711 TRHP20396 242 aaPredicted RBP21.81■■□□□ 1.08
PRDM8-201ENST00000339711 SHANK2Q9UPX8 1470 aa21.81■■□□□ 1.08
PRDM8-201ENST00000339711 ABCC10Q5T3U5 1492 aa21.79■■□□□ 1.08
PRDM8-201ENST00000339711 ADGRL2O95490 1459 aa21.79■■□□□ 1.08
PRDM8-201ENST00000339711 ASXL2Q76L83 1435 aa21.79■■□□□ 1.08
PRDM8-201ENST00000339711 PZPP20742 1482 aa21.78■■□□□ 1.08
PRDM8-201ENST00000339711 SRPK2P78362 688 aaKnown RBP21.78■■□□□ 1.08
PRDM8-201ENST00000339711 MYBBP1AQ9BQG0 1328 aaKnown RBP21.77■■□□□ 1.08
PRDM8-201ENST00000339711 TRAPPC8Q9Y2L5 1435 aa21.77■■□□□ 1.08
PRDM8-201ENST00000339711 VGFO15240 615 aaPredicted RBP21.76■■□□□ 1.07
PRDM8-201ENST00000339711 CHD1O14646 1710 aa21.76■■□□□ 1.07
PRDM8-201ENST00000339711 WDR7Q9Y4E6 1490 aa21.76■■□□□ 1.07
PRDM8-201ENST00000339711 CFAP70Q5T0N1 1121 aa21.75■■□□□ 1.07
PRDM8-201ENST00000339711 CFAP53Q96M91 514 aa21.75■■□□□ 1.07
PRDM8-201ENST00000339711 GCC2Q8IWJ2 1684 aa21.73■■□□□ 1.07
PRDM8-201ENST00000339711 B4GALNT3Q6L9W6 998 aa21.73■■□□□ 1.07
PRDM8-201ENST00000339711 KDM6BO15054 1643 aa21.72■■□□□ 1.07
PRDM8-201ENST00000339711 ZBTB47Q9UFB7 747 aaPredicted RBP21.72■■□□□ 1.07
PRDM8-201ENST00000339711 MORC1Q86VD1 984 aa21.72■■□□□ 1.07
PRDM8-201ENST00000339711 ANP32EQ9BTT0 268 aa21.71■■□□□ 1.07
PRDM8-201ENST00000339711 LRRIQ1Q96JM4 1722 aa21.71■■□□□ 1.07
PRDM8-201ENST00000339711 HDGFP51858 240 aaKnown RBP21.7■■□□□ 1.06
PRDM8-201ENST00000339711 CCDC184Q52MB2 194 aa21.7■■□□□ 1.06
PRDM8-201ENST00000339711 DUOX2Q9NRD8 1548 aa21.69■■□□□ 1.06
PRDM8-201ENST00000339711 PPP4R2Q9NY27 417 aa21.68■■□□□ 1.06
PRDM8-201ENST00000339711 MBD5Q9P267 1494 aa21.68■■□□□ 1.06
PRDM8-201ENST00000339711 FAM135AQ9P2D6 1515 aa21.68■■□□□ 1.06
PRDM8-201ENST00000339711 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.68■■□□□ 1.06
PRDM8-201ENST00000339711 DHX29Q7Z478 1369 aaKnown RBP21.68■■□□□ 1.06
PRDM8-201ENST00000339711 NEUROD2Q15784 382 aa21.67■■□□□ 1.06
PRDM8-201ENST00000339711 ERCC6L2Q5T890 1561 aa21.67■■□□□ 1.06
PRDM8-201ENST00000339711 ZBED9Q6R2W3 1325 aa21.66■■□□□ 1.06
PRDM8-201ENST00000339711 ERBINQ96RT1 1412 aa21.65■■□□□ 1.06
PRDM8-201ENST00000339711 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.65■■□□□ 1.06
PRDM8-201ENST00000339711 TMEM132EQ6IEE7 984 aa21.65■■□□□ 1.06
PRDM8-201ENST00000339711 PPM1GO15355 546 aaPredicted RBP21.65■■□□□ 1.06
PRDM8-201ENST00000339711 CENPJQ9HC77 1338 aaPredicted RBP21.63■■□□□ 1.05
PRDM8-201ENST00000339711 NUDCQ9Y266 331 aa21.62■■□□□ 1.05
PRDM8-201ENST00000339711 ARXQ96QS3 562 aa21.62■■□□□ 1.05
PRDM8-201ENST00000339711 KDM5BQ9UGL1 1544 aa21.6■■□□□ 1.05
PRDM8-201ENST00000339711 UHRF1BP1LA0JNW5 1464 aa21.59■■□□□ 1.05
PRDM8-201ENST00000339711 TEX14Q8IWB6 1497 aa21.59■■□□□ 1.05
PRDM8-201ENST00000339711 ARHGEF5Q12774 1597 aa21.58■■□□□ 1.05
PRDM8-201ENST00000339711 RBM19Q9Y4C8 960 aaKnown RBP21.58■■□□□ 1.04
PRDM8-201ENST00000339711 ADGBQ8N7X0 1667 aa21.57■■□□□ 1.04
PRDM8-201ENST00000339711 U2SURPO15042 1029 aaKnown RBP21.57■■□□□ 1.04
PRDM8-201ENST00000339711 RTEL1-TNFRSF6BF6WH68 1400 aa21.56■■□□□ 1.04
PRDM8-201ENST00000339711 DENND4BO75064 1496 aaPredicted RBP21.56■■□□□ 1.04
PRDM8-201ENST00000339711 EIF5BO60841 1220 aaKnown RBP21.56■■□□□ 1.04
PRDM8-201ENST00000339711 TSHZ2Q9NRE2 1034 aa21.56■■□□□ 1.04
PRDM8-201ENST00000339711 SAMD9LQ8IVG5 1584 aa21.56■■□□□ 1.04
PRDM8-201ENST00000339711 EVC2Q86UK5 1308 aa21.56■■□□□ 1.04
PRDM8-201ENST00000339711 HDGFL2Q7Z4V5 671 aaPredicted RBP21.55■■□□□ 1.04
PRDM8-201ENST00000339711 SLC52A1Q9NWF4 448 aa21.55■■□□□ 1.04
PRDM8-201ENST00000339711 TTC37Q6PGP7 1564 aa21.54■■□□□ 1.04
PRDM8-201ENST00000339711 RALGAPBQ86X10 1494 aa21.54■■□□□ 1.04
PRDM8-201ENST00000339711 BRD4O60885 1362 aaPredicted RBP21.54■■□□□ 1.04
PRDM8-201ENST00000339711 ERICH6BQ5W0A0 696 aa21.53■■□□□ 1.04
PRDM8-201ENST00000339711 RCAN3Q9UKA8 241 aa21.53■■□□□ 1.04
PRDM8-201ENST00000339711 ZNF518AQ6AHZ1 1483 aa21.53■■□□□ 1.04
PRDM8-201ENST00000339711 ADCY10Q96PN6 1610 aa21.52■■□□□ 1.04
PRDM8-201ENST00000339711 TERF2IPQ9NYB0 399 aa21.52■■□□□ 1.04
PRDM8-201ENST00000339711 MINK1Q8N4C8 1332 aaPredicted RBP21.52■■□□□ 1.04
PRDM8-201ENST00000339711 CDC42BPAQ5VT25 1732 aa21.52■■□□□ 1.04
PRDM8-201ENST00000339711 ADGRF5Q8IZF2 1346 aa21.51■■□□□ 1.03
PRDM8-201ENST00000339711 PDE3BQ13370 1112 aa21.51■■□□□ 1.03
PRDM8-201ENST00000339711 PNISRQ8TF01 805 aaKnown RBP21.51■■□□□ 1.03
PRDM8-201ENST00000339711 PRAG1Q86YV5 1406 aa21.51■■□□□ 1.03
PRDM8-201ENST00000339711 CCDC146Q8IYE0 955 aa21.5■■□□□ 1.03
PRDM8-201ENST00000339711 MAPK8IP3Q9UPT6 1336 aa21.5■■□□□ 1.03
PRDM8-201ENST00000339711 A2MP01023 1474 aa21.5■■□□□ 1.03
PRDM8-201ENST00000339711 MYO5CQ9NQX4 1742 aa21.5■■□□□ 1.03
PRDM8-201ENST00000339711 PREX2Q70Z35 1606 aa21.49■■□□□ 1.03
PRDM8-201ENST00000339711 RPGRIP1LQ68CZ1 1315 aa21.48■■□□□ 1.03
PRDM8-201ENST00000339711 ARHGEF12Q9NZN5 1544 aa21.48■■□□□ 1.03
PRDM8-201ENST00000339711 U2AF1L5P0DN76 240 aaPredicted RBP21.47■■□□□ 1.03
PRDM8-201ENST00000339711 U2AF1Q01081 240 aaKnown RBP eCLIP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms