RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 ERBINQ96RT1 1412 aa14.14□□□□□ -0.15
ARHGEF3-202ENST00000338458 ATP7AQ04656 1500 aa14.14□□□□□ -0.15
ARHGEF3-202ENST00000338458 ARAP3Q8WWN8 1544 aa14.14□□□□□ -0.15
ARHGEF3-202ENST00000338458 ANP32CO43423 234 aa14.14□□□□□ -0.15
ARHGEF3-202ENST00000338458 CARD11Q9BXL7 1154 aa14.13□□□□□ -0.15
ARHGEF3-202ENST00000338458 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
ARHGEF3-202ENST00000338458 RIMBP3CA6NJZ7 1639 aa14.13□□□□□ -0.15
ARHGEF3-202ENST00000338458 RIMBP3BA6NNM3 1639 aa14.13□□□□□ -0.15
ARHGEF3-202ENST00000338458 RIMBP3Q9UFD9 1639 aa14.13□□□□□ -0.15
ARHGEF3-202ENST00000338458 PLA2R1Q13018 1463 aa14.12□□□□□ -0.15
ARHGEF3-202ENST00000338458 RTEL1-TNFRSF6BF6WH68 1400 aa14.11□□□□□ -0.15
ARHGEF3-202ENST00000338458 UNC13BO14795 1591 aa14.11□□□□□ -0.15
ARHGEF3-202ENST00000338458 USP47Q96K76 1375 aa14.09□□□□□ -0.15
ARHGEF3-202ENST00000338458 DHX29Q7Z478 1369 aaKnown RBP14.09□□□□□ -0.15
ARHGEF3-202ENST00000338458 NBPF1Q3BBV0 1214 aa14.08□□□□□ -0.15
ARHGEF3-202ENST00000338458 KANK1Q14678 1352 aa14.08□□□□□ -0.16
ARHGEF3-202ENST00000338458 ZNF518AQ6AHZ1 1483 aa14.08□□□□□ -0.16
ARHGEF3-202ENST00000338458 IQGAP3Q86VI3 1631 aa14.08□□□□□ -0.16
ARHGEF3-202ENST00000338458 CHGAP10645 457 aaKnown RBP14.07□□□□□ -0.16
ARHGEF3-202ENST00000338458 GTF3C3Q9Y5Q9 886 aa14.07□□□□□ -0.16
ARHGEF3-202ENST00000338458 INO80Q9ULG1 1556 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF3-202ENST00000338458 KIF7Q2M1P5 1343 aa14.06□□□□□ -0.16
ARHGEF3-202ENST00000338458 ST20-MTHFSA0A0A6YYL1 179 aa14.06□□□□□ -0.16
ARHGEF3-202ENST00000338458 ROCK2O75116 1388 aaKnown RBP14.06□□□□□ -0.16
ARHGEF3-202ENST00000338458 POGZQ7Z3K3 1410 aa14.05□□□□□ -0.16
ARHGEF3-202ENST00000338458 CCDC7Q96M83 1385 aa14.05□□□□□ -0.16
ARHGEF3-202ENST00000338458 KIDINS220Q9ULH0 1771 aa14.05□□□□□ -0.16
ARHGEF3-202ENST00000338458 SENP3Q9H4L4 574 aaPredicted RBP14.04□□□□□ -0.16
ARHGEF3-202ENST00000338458 CFAP65Q6ZU64 1925 aaKnown RBP14.04□□□□□ -0.16
ARHGEF3-202ENST00000338458 TSPOAP1O95153 1857 aa14.03□□□□□ -0.16
ARHGEF3-202ENST00000338458 MAGI2Q86UL8 1455 aa14.03□□□□□ -0.16
ARHGEF3-202ENST00000338458 A2MP01023 1474 aa14.03□□□□□ -0.16
ARHGEF3-202ENST00000338458 SPATA31E1Q6ZUB1 1445 aa14.02□□□□□ -0.17
ARHGEF3-202ENST00000338458 WASHC2CQ9Y4E1 1318 aa14.02□□□□□ -0.17
ARHGEF3-202ENST00000338458 E9PCH4 1651 aa14.02□□□□□ -0.17
ARHGEF3-202ENST00000338458 ATP10AO60312 1499 aa14□□□□□ -0.17
ARHGEF3-202ENST00000338458 UHRF1BP1Q6BDS2 1440 aa13.99□□□□□ -0.17
ARHGEF3-202ENST00000338458 UGGT1Q9NYU2 1555 aa13.99□□□□□ -0.17
ARHGEF3-202ENST00000338458 RALGAPBQ86X10 1494 aa13.99□□□□□ -0.17
ARHGEF3-202ENST00000338458 PRAG1Q86YV5 1406 aa13.99□□□□□ -0.17
ARHGEF3-202ENST00000338458 YEATS2Q9ULM3 1422 aa13.99□□□□□ -0.17
ARHGEF3-202ENST00000338458 CFAP74Q9C0B2 1584 aa13.98□□□□□ -0.17
ARHGEF3-202ENST00000338458 NEO1Q92859 1461 aa13.98□□□□□ -0.17
ARHGEF3-202ENST00000338458 MLECQ14165 292 aa13.97□□□□□ -0.17
ARHGEF3-202ENST00000338458 HECW2Q9P2P5 1572 aa13.97□□□□□ -0.17
ARHGEF3-202ENST00000338458 CNTLNQ9NXG0 1405 aa13.97□□□□□ -0.17
ARHGEF3-202ENST00000338458 NUTM2DQ5VT03 806 aaPredicted RBP13.97□□□□□ -0.17
ARHGEF3-202ENST00000338458 MLH3Q9UHC1 1453 aa13.96□□□□□ -0.17
ARHGEF3-202ENST00000338458 CCDC184Q52MB2 194 aa13.96□□□□□ -0.17
ARHGEF3-202ENST00000338458 BCORL1Q5H9F3 1711 aa13.96□□□□□ -0.18
ARHGEF3-202ENST00000338458 KDM5CP41229 1560 aa13.95□□□□□ -0.18
ARHGEF3-202ENST00000338458 ABCA6Q8N139 1617 aa13.95□□□□□ -0.18
ARHGEF3-202ENST00000338458 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
ARHGEF3-202ENST00000338458 DEPDC5O75140 1603 aa13.95□□□□□ -0.18
ARHGEF3-202ENST00000338458 TET3O43151 1660 aa13.94□□□□□ -0.18
ARHGEF3-202ENST00000338458 FRMPD1Q5SYB0 1578 aa13.94□□□□□ -0.18
ARHGEF3-202ENST00000338458 CEP152O94986 1710 aa13.94□□□□□ -0.18
ARHGEF3-202ENST00000338458 CLTCL1P53675 1640 aa13.94□□□□□ -0.18
ARHGEF3-202ENST00000338458 MAP3K4Q9Y6R4 1608 aa13.94□□□□□ -0.18
ARHGEF3-202ENST00000338458 CCER2I3L3R5 266 aa13.94□□□□□ -0.18
ARHGEF3-202ENST00000338458 SPHKAPQ2M3C7 1700 aa13.93□□□□□ -0.18
ARHGEF3-202ENST00000338458 PRDM15P57071 1507 aaPredicted RBP13.93□□□□□ -0.18
ARHGEF3-202ENST00000338458 DIP2BQ9P265 1576 aa13.92□□□□□ -0.18
ARHGEF3-202ENST00000338458 PRKRIP1Q9H875 184 aaPredicted RBP13.92□□□□□ -0.18
ARHGEF3-202ENST00000338458 TRPM2O94759 1503 aa13.92□□□□□ -0.18
ARHGEF3-202ENST00000338458 PTPRTO14522 1441 aa13.92□□□□□ -0.18
ARHGEF3-202ENST00000338458 FAM9BQ8IZU0 186 aa13.91□□□□□ -0.18
ARHGEF3-202ENST00000338458 EIF2AK4Q9P2K8 1649 aaKnown RBP13.91□□□□□ -0.18
ARHGEF3-202ENST00000338458 CFAP70Q5T0N1 1121 aa13.91□□□□□ -0.18
ARHGEF3-202ENST00000338458 SENP3-EIF4A1A0A087X0R7 540 aa13.91□□□□□ -0.18
ARHGEF3-202ENST00000338458 ADGRF5Q8IZF2 1346 aa13.91□□□□□ -0.18
ARHGEF3-202ENST00000338458 VWDEQ8N2E2 1590 aa13.91□□□□□ -0.18
ARHGEF3-202ENST00000338458 PPRC1Q5VV67 1664 aaKnown RBP13.91□□□□□ -0.18
ARHGEF3-202ENST00000338458 NPATQ14207 1427 aa13.9□□□□□ -0.18
ARHGEF3-202ENST00000338458 TRPM1Q7Z4N2 1603 aa13.9□□□□□ -0.18
ARHGEF3-202ENST00000338458 MRS2Q9HD23 443 aa13.9□□□□□ -0.18
ARHGEF3-202ENST00000338458 DIP2CQ9Y2E4 1556 aa13.89□□□□□ -0.19
ARHGEF3-202ENST00000338458 EFCAB6Q5THR3 1501 aa13.89□□□□□ -0.19
ARHGEF3-202ENST00000338458 RICTORQ6R327 1708 aa13.89□□□□□ -0.19
ARHGEF3-202ENST00000338458 HNRNPUQ00839 825 aaKnown RBP eCLIP13.88□□□□□ -0.19
ARHGEF3-202ENST00000338458 GLI2P10070 1586 aa13.87□□□□□ -0.19
ARHGEF3-202ENST00000338458 FBXO31Q5XUX0 539 aaPredicted RBP13.87□□□□□ -0.19
ARHGEF3-202ENST00000338458 DISP3Q9P2K9 1392 aa13.85□□□□□ -0.19
ARHGEF3-202ENST00000338458 TESK2Q96S53 571 aa13.85□□□□□ -0.19
ARHGEF3-202ENST00000338458 RNF17Q9BXT8 1623 aaKnown RBP13.85□□□□□ -0.19
ARHGEF3-202ENST00000338458 ABCC3O15438 1527 aa13.84□□□□□ -0.19
ARHGEF3-202ENST00000338458 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
ARHGEF3-202ENST00000338458 TMEM132EQ6IEE7 984 aa13.84□□□□□ -0.19
ARHGEF3-202ENST00000338458 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
ARHGEF3-202ENST00000338458 ARID4BQ4LE39 1312 aaPredicted RBP13.84□□□□□ -0.19
ARHGEF3-202ENST00000338458 NOS1P29475 1434 aa13.84□□□□□ -0.19
ARHGEF3-202ENST00000338458 IDI1Q13907 227 aa13.84□□□□□ -0.19
ARHGEF3-202ENST00000338458 COL17A1Q9UMD9 1497 aaPredicted RBP13.83□□□□□ -0.19
ARHGEF3-202ENST00000338458 TMF1P82094 1093 aa13.83□□□□□ -0.19
ARHGEF3-202ENST00000338458 GPRASP1Q5JY77 1395 aa13.83□□□□□ -0.2
ARHGEF3-202ENST00000338458 POLR1AO95602 1720 aaPredicted RBP13.82□□□□□ -0.2
ARHGEF3-202ENST00000338458 CC2D1BQ5T0F9 858 aaKnown RBP13.82□□□□□ -0.2
ARHGEF3-202ENST00000338458 STAG3Q9UJ98 1225 aa13.82□□□□□ -0.2
ARHGEF3-202ENST00000338458 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
ARHGEF3-202ENST00000338458 MADDQ8WXG6 1647 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms