RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 RALBP1Q15311 655 aa29.05■■■□□ 2.24
PTDSS1-201ENST00000337004 RNF123Q5XPI4 1314 aa29.03■■■□□ 2.24
PTDSS1-201ENST00000337004 FAM135AQ9P2D6 1515 aa29.02■■■□□ 2.24
PTDSS1-201ENST00000337004 MYBBP1AQ9BQG0 1328 aaKnown RBP29.01■■■□□ 2.23
PTDSS1-201ENST00000337004 BRD4O60885 1362 aaPredicted RBP29.01■■■□□ 2.23
PTDSS1-201ENST00000337004 SAMD9LQ8IVG5 1584 aa29■■■□□ 2.23
PTDSS1-201ENST00000337004 CCDC144AA2RUR9 1427 aa28.99■■■□□ 2.23
PTDSS1-201ENST00000337004 PREX2Q70Z35 1606 aa28.96■■■□□ 2.23
PTDSS1-201ENST00000337004 LRPPRCP42704 1394 aaKnown RBP28.96■■■□□ 2.23
PTDSS1-201ENST00000337004 ERICH6Q7L0X2 663 aa28.94■■■□□ 2.22
PTDSS1-201ENST00000337004 PRAG1Q86YV5 1406 aa28.94■■■□□ 2.22
PTDSS1-201ENST00000337004 CDC42BPBQ9Y5S2 1711 aa28.92■■■□□ 2.22
PTDSS1-201ENST00000337004 CCDC136Q96JN2 1154 aa28.89■■■□□ 2.22
PTDSS1-201ENST00000337004 RGL3Q3MIN7 710 aa28.89■■■□□ 2.21
PTDSS1-201ENST00000337004 SYCP2Q9BX26 1530 aa28.88■■■□□ 2.21
PTDSS1-201ENST00000337004 MAST1Q9Y2H9 1570 aa28.87■■■□□ 2.21
PTDSS1-201ENST00000337004 ARHGAP5Q13017 1502 aa28.87■■■□□ 2.21
PTDSS1-201ENST00000337004 NLRP13Q86W25 1043 aa28.87■■■□□ 2.21
PTDSS1-201ENST00000337004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.87■■■□□ 2.21
PTDSS1-201ENST00000337004 GPRASP1Q5JY77 1395 aa28.86■■■□□ 2.21
PTDSS1-201ENST00000337004 PLA2R1Q13018 1463 aa28.84■■■□□ 2.21
PTDSS1-201ENST00000337004 SENP3-EIF4A1A0A087X0R7 540 aa28.84■■■□□ 2.21
PTDSS1-201ENST00000337004 NBPF1Q3BBV0 1214 aa28.84■■■□□ 2.21
PTDSS1-201ENST00000337004 E9PCH4 1651 aa28.84■■■□□ 2.21
PTDSS1-201ENST00000337004 TRPM1Q7Z4N2 1603 aa28.84■■■□□ 2.21
PTDSS1-201ENST00000337004 PLEKHH2Q8IVE3 1493 aa28.84■■■□□ 2.21
PTDSS1-201ENST00000337004 UNC13BO14795 1591 aa28.83■■■□□ 2.21
PTDSS1-201ENST00000337004 PARD3Q8TEW0 1356 aa28.82■■■□□ 2.2
PTDSS1-201ENST00000337004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.81■■■□□ 2.2
PTDSS1-201ENST00000337004 WASHC2CQ9Y4E1 1318 aa28.8■■■□□ 2.2
PTDSS1-201ENST00000337004 A2MP01023 1474 aa28.8■■■□□ 2.2
PTDSS1-201ENST00000337004 PER1O15534 1290 aaPredicted RBP28.79■■■□□ 2.2
PTDSS1-201ENST00000337004 TTC37Q6PGP7 1564 aa28.79■■■□□ 2.2
PTDSS1-201ENST00000337004 PLXNC1O60486 1568 aa28.76■■■□□ 2.19
PTDSS1-201ENST00000337004 PDE3BQ13370 1112 aa28.76■■■□□ 2.19
PTDSS1-201ENST00000337004 DUOX2Q9NRD8 1548 aa28.74■■■□□ 2.19
PTDSS1-201ENST00000337004 TESK2Q96S53 571 aa28.74■■■□□ 2.19
PTDSS1-201ENST00000337004 IQGAP3Q86VI3 1631 aa28.74■■■□□ 2.19
PTDSS1-201ENST00000337004 COL17A1Q9UMD9 1497 aaPredicted RBP28.73■■■□□ 2.19
PTDSS1-201ENST00000337004 ATP10AO60312 1499 aa28.73■■■□□ 2.19
PTDSS1-201ENST00000337004 LAMC1P11047 1609 aa28.73■■■□□ 2.19
PTDSS1-201ENST00000337004 PRDM15P57071 1507 aaPredicted RBP28.72■■■□□ 2.19
PTDSS1-201ENST00000337004 ABCC2Q92887 1545 aa28.71■■■□□ 2.19
PTDSS1-201ENST00000337004 RRP1P56182 461 aaKnown RBP28.71■■■□□ 2.19
PTDSS1-201ENST00000337004 ERBINQ96RT1 1412 aa28.71■■■□□ 2.19
PTDSS1-201ENST00000337004 TMF1P82094 1093 aa28.7■■■□□ 2.19
PTDSS1-201ENST00000337004 SHROOM2Q13796 1616 aa28.7■■■□□ 2.18
PTDSS1-201ENST00000337004 RCAN3Q9UKA8 241 aa28.69■■■□□ 2.18
PTDSS1-201ENST00000337004 EIF2AK4Q9P2K8 1649 aaKnown RBP28.69■■■□□ 2.18
PTDSS1-201ENST00000337004 DISP3Q9P2K9 1392 aa28.69■■■□□ 2.18
PTDSS1-201ENST00000337004 MAGI2Q86UL8 1455 aa28.67■■■□□ 2.18
PTDSS1-201ENST00000337004 EFCAB2Q5VUJ9 269 aa28.67■■■□□ 2.18
PTDSS1-201ENST00000337004 PANK3Q9H999 370 aa28.67■■■□□ 2.18
PTDSS1-201ENST00000337004 MYO5CQ9NQX4 1742 aa28.66■■■□□ 2.18
PTDSS1-201ENST00000337004 INSRP06213 1382 aa28.66■■■□□ 2.18
PTDSS1-201ENST00000337004 PLCH2O75038 1416 aa28.66■■■□□ 2.18
PTDSS1-201ENST00000337004 CC2D1BQ5T0F9 858 aaKnown RBP28.66■■■□□ 2.18
PTDSS1-201ENST00000337004 CHD1O14646 1710 aa28.65■■■□□ 2.18
PTDSS1-201ENST00000337004 SALL2Q9Y467 1007 aaPredicted RBP28.65■■■□□ 2.18
PTDSS1-201ENST00000337004 NOP58Q9Y2X3 529 aaKnown RBP28.6■■■□□ 2.17
PTDSS1-201ENST00000337004 ZMYM4Q5VZL5 1548 aa28.6■■■□□ 2.17
PTDSS1-201ENST00000337004 EXOC6Q8TAG9 804 aa28.58■■■□□ 2.17
PTDSS1-201ENST00000337004 MYT1LQ9UL68 1186 aa28.58■■■□□ 2.17
PTDSS1-201ENST00000337004 ANP32AP39687 249 aaKnown RBP28.57■■■□□ 2.16
PTDSS1-201ENST00000337004 ERCC6L2Q5T890 1561 aa28.56■■■□□ 2.16
PTDSS1-201ENST00000337004 BLMP54132 1417 aaPredicted RBP28.55■■■□□ 2.16
PTDSS1-201ENST00000337004 CDCA7LQ96GN5 454 aa28.53■■■□□ 2.16
PTDSS1-201ENST00000337004 STAC3Q96MF2 364 aa28.53■■■□□ 2.16
PTDSS1-201ENST00000337004 TRAPPC8Q9Y2L5 1435 aa28.51■■■□□ 2.15
PTDSS1-201ENST00000337004 ABCC1P33527 1531 aa28.51■■■□□ 2.15
PTDSS1-201ENST00000337004 IPO9Q96P70 1041 aaKnown RBP28.5■■■□□ 2.15
PTDSS1-201ENST00000337004 SPAG9O60271 1321 aaKnown RBP28.49■■■□□ 2.15
PTDSS1-201ENST00000337004 CDCA8Q53HL2 280 aa28.49■■■□□ 2.15
PTDSS1-201ENST00000337004 UHRF1BP1LA0JNW5 1464 aa28.49■■■□□ 2.15
PTDSS1-201ENST00000337004 TCERG1O14776 1098 aaKnown RBP28.48■■■□□ 2.15
PTDSS1-201ENST00000337004 KNSTRNQ9Y448 316 aa28.48■■■□□ 2.15
PTDSS1-201ENST00000337004 RNF17Q9BXT8 1623 aaKnown RBP28.48■■■□□ 2.15
PTDSS1-201ENST00000337004 RTEL1-TNFRSF6BF6WH68 1400 aa28.47■■■□□ 2.15
PTDSS1-201ENST00000337004 ZCCHC11Q5TAX3 1644 aaKnown RBP28.45■■■□□ 2.14
PTDSS1-201ENST00000337004 WDR7Q9Y4E6 1490 aa28.43■■■□□ 2.14
PTDSS1-201ENST00000337004 PAK3O75914 559 aaPredicted RBP28.43■■■□□ 2.14
PTDSS1-201ENST00000337004 AFAP1Q8N556 730 aa28.42■■■□□ 2.14
PTDSS1-201ENST00000337004 BCL11AQ9H165 835 aa28.42■■■□□ 2.14
PTDSS1-201ENST00000337004 ADAMTS8Q9UP79 889 aa28.42■■■□□ 2.14
PTDSS1-201ENST00000337004 TRPM2O94759 1503 aa28.41■■■□□ 2.14
PTDSS1-201ENST00000337004 PTPRTO14522 1441 aa28.41■■■□□ 2.14
PTDSS1-201ENST00000337004 MADDQ8WXG6 1647 aa28.41■■■□□ 2.14
PTDSS1-201ENST00000337004 SCAPERQ9BY12 1400 aa28.4■■■□□ 2.14
PTDSS1-201ENST00000337004 ZBTB47Q9UFB7 747 aaPredicted RBP28.4■■■□□ 2.14
PTDSS1-201ENST00000337004 SCAF11Q99590 1463 aaKnown RBP28.4■■■□□ 2.14
PTDSS1-201ENST00000337004 PPP2R1AP30153 589 aa28.39■■■□□ 2.14
PTDSS1-201ENST00000337004 MS4A1P11836 297 aa28.38■■■□□ 2.13
PTDSS1-201ENST00000337004 WDR43Q15061 677 aaKnown RBP eCLIP28.38■■■□□ 2.13
PTDSS1-201ENST00000337004 AMER1Q5JTC6 1135 aaPredicted RBP28.37■■■□□ 2.13
PTDSS1-201ENST00000337004 ARAP3Q8WWN8 1544 aa28.37■■■□□ 2.13
PTDSS1-201ENST00000337004 PLIN1O60240 522 aa28.36■■■□□ 2.13
PTDSS1-201ENST00000337004 KANK1Q14678 1352 aa28.35■■■□□ 2.13
PTDSS1-201ENST00000337004 ZFYVE16Q7Z3T8 1539 aa28.34■■■□□ 2.13
PTDSS1-201ENST00000337004 IQGAP1P46940 1657 aa28.34■■■□□ 2.13
PTDSS1-201ENST00000337004 EIF3AQ14152 1382 aaKnown RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms