RNA–Protein interactions for RNA: ENST00000324306.10

ZKSCAN1-201, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN1, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-201ENST00000324306 CDR1P51861 262 aa11.59□□□□□ -0.55
ZKSCAN1-201ENST00000324306 ANKRD30AQ9BXX3 1397 aa11.59□□□□□ -0.55
ZKSCAN1-201ENST00000324306 AK7Q96M32 723 aa11.59□□□□□ -0.55
ZKSCAN1-201ENST00000324306 CHMP5Q9NZZ3 219 aa11.58□□□□□ -0.56
ZKSCAN1-201ENST00000324306 HSP90B1P14625 803 aaKnown RBP11.58□□□□□ -0.56
ZKSCAN1-201ENST00000324306 RRP9O43818 475 aaKnown RBP11.58□□□□□ -0.56
ZKSCAN1-201ENST00000324306 CCP110O43303 1012 aa11.58□□□□□ -0.56
ZKSCAN1-201ENST00000324306 SMC4Q9NTJ3 1288 aa11.57□□□□□ -0.56
ZKSCAN1-201ENST00000324306 UACAQ9BZF9 1416 aa11.57□□□□□ -0.56
ZKSCAN1-201ENST00000324306 HDGFL2Q7Z4V5 671 aaPredicted RBP11.57□□□□□ -0.56
ZKSCAN1-201ENST00000324306 NUCB2P80303 420 aa11.57□□□□□ -0.56
ZKSCAN1-201ENST00000324306 LETM1O95202 739 aaPredicted RBP11.57□□□□□ -0.56
ZKSCAN1-201ENST00000324306 HOOK1Q9UJC3 728 aaKnown RBP11.57□□□□□ -0.56
ZKSCAN1-201ENST00000324306 HDGFP51858 240 aaKnown RBP11.57□□□□□ -0.56
ZKSCAN1-201ENST00000324306 FAM13BQ9NYF5 915 aa11.57□□□□□ -0.56
ZKSCAN1-201ENST00000324306 E9PSI1 815 aa11.56□□□□□ -0.56
ZKSCAN1-201ENST00000324306 BECN2A8MW95 431 aa11.56□□□□□ -0.56
ZKSCAN1-201ENST00000324306 STK31Q9BXU1 1019 aa11.55□□□□□ -0.56
ZKSCAN1-201ENST00000324306 CARMIL1Q5VZK9 1371 aa11.55□□□□□ -0.56
ZKSCAN1-201ENST00000324306 HSP90B2PQ58FF3 399 aa11.55□□□□□ -0.56
ZKSCAN1-201ENST00000324306 ABCC8Q09428 1581 aa11.55□□□□□ -0.56
ZKSCAN1-201ENST00000324306 NINLQ9Y2I6 1382 aa11.54□□□□□ -0.56
ZKSCAN1-201ENST00000324306 ERCC4Q92889 916 aaPredicted RBP11.54□□□□□ -0.56
ZKSCAN1-201ENST00000324306 ANKRD20A12PQ8NF67 263 aa11.54□□□□□ -0.56
ZKSCAN1-201ENST00000324306 IPO7O95373 1038 aaKnown RBP11.54□□□□□ -0.56
ZKSCAN1-201ENST00000324306 CCDC173Q0VFZ6 552 aa11.54□□□□□ -0.56
ZKSCAN1-201ENST00000324306 SOGA1O94964 1423 aa11.54□□□□□ -0.56
ZKSCAN1-201ENST00000324306 CUX2O14529 1486 aa11.54□□□□□ -0.56
ZKSCAN1-201ENST00000324306 DCTN1Q14203 1278 aa11.54□□□□□ -0.56
ZKSCAN1-201ENST00000324306 ZBTB7CA1YPR0 619 aa11.53□□□□□ -0.56
ZKSCAN1-201ENST00000324306 TRIM6-TRIM34B2RNG4 842 aa11.53□□□□□ -0.56
ZKSCAN1-201ENST00000324306 NAT10Q9H0A0 1025 aaKnown RBP11.53□□□□□ -0.56
ZKSCAN1-201ENST00000324306 CLSTN1O94985 981 aa11.53□□□□□ -0.56
ZKSCAN1-201ENST00000324306 NASPP49321 788 aaPredicted RBP11.53□□□□□ -0.56
ZKSCAN1-201ENST00000324306 CEP89Q96ST8 783 aa11.52□□□□□ -0.56
ZKSCAN1-201ENST00000324306 H3BQV1 296 aa11.52□□□□□ -0.56
ZKSCAN1-201ENST00000324306 IFFO2Q5TF58 517 aa11.52□□□□□ -0.56
ZKSCAN1-201ENST00000324306 KIF7Q2M1P5 1343 aa11.52□□□□□ -0.56
ZKSCAN1-201ENST00000324306 DHX57Q6P158 1386 aaKnown RBP11.52□□□□□ -0.57
ZKSCAN1-201ENST00000324306 CAVIN1Q6NZI2 390 aaKnown RBP11.52□□□□□ -0.57
ZKSCAN1-201ENST00000324306 TSPYL1Q9H0U9 437 aa11.52□□□□□ -0.57
ZKSCAN1-201ENST00000324306 RUFY1Q96T51 708 aa11.51□□□□□ -0.57
ZKSCAN1-201ENST00000324306 APPP05067 770 aa11.51□□□□□ -0.57
ZKSCAN1-201ENST00000324306 LRRFIP1Q32MZ4 808 aaKnown RBP11.51□□□□□ -0.57
ZKSCAN1-201ENST00000324306 U2AF1L5P0DN76 240 aaPredicted RBP11.51□□□□□ -0.57
ZKSCAN1-201ENST00000324306 U2AF1Q01081 240 aaKnown RBP eCLIP11.51□□□□□ -0.574e-6■■■□□ 19.2
ZKSCAN1-201ENST00000324306 DDX19BQ9UMR2 479 aa11.5□□□□□ -0.57
ZKSCAN1-201ENST00000324306 RDXP35241 583 aaKnown RBP11.5□□□□□ -0.57
ZKSCAN1-201ENST00000324306 MPHOSPH9Q99550 1183 aa11.5□□□□□ -0.57
ZKSCAN1-201ENST00000324306 SF3A1Q15459 793 aaKnown RBP11.49□□□□□ -0.57
ZKSCAN1-201ENST00000324306 TERF2IPQ9NYB0 399 aa11.49□□□□□ -0.57
ZKSCAN1-201ENST00000324306 CNTLNQ9NXG0 1405 aa11.49□□□□□ -0.57
ZKSCAN1-201ENST00000324306 MBD3O95983 291 aa11.49□□□□□ -0.57
ZKSCAN1-201ENST00000324306 ZKSCAN2Q63HK3 967 aa11.49□□□□□ -0.57
ZKSCAN1-201ENST00000324306 SENP3-EIF4A1A0A087X0R7 540 aa11.49□□□□□ -0.57
ZKSCAN1-201ENST00000324306 SRPK2P78362 688 aaKnown RBP11.49□□□□□ -0.57
ZKSCAN1-201ENST00000324306 TPD52L1Q16890 204 aaPredicted RBP11.49□□□□□ -0.57
ZKSCAN1-201ENST00000324306 RRP12Q5JTH9 1297 aaKnown RBP11.49□□□□□ -0.57
ZKSCAN1-201ENST00000324306 RUFY2Q8WXA3 655 aa11.49□□□□□ -0.57
ZKSCAN1-201ENST00000324306 CCDC191Q8NCU4 936 aa11.48□□□□□ -0.57
ZKSCAN1-201ENST00000324306 PKD2Q13563 968 aa11.48□□□□□ -0.57
ZKSCAN1-201ENST00000324306 MNS1Q8NEH6 495 aa11.48□□□□□ -0.57
ZKSCAN1-201ENST00000324306 RASSF8Q8NHQ8 419 aa11.48□□□□□ -0.57
ZKSCAN1-201ENST00000324306 TULP1O00294 542 aaPredicted RBP11.48□□□□□ -0.57
ZKSCAN1-201ENST00000324306 NFKBIBQ15653 356 aa11.48□□□□□ -0.57
ZKSCAN1-201ENST00000324306 CARMIL2Q6F5E8 1435 aa11.48□□□□□ -0.57
ZKSCAN1-201ENST00000324306 CCAR2Q8N163 923 aaKnown RBP11.47□□□□□ -0.57
ZKSCAN1-201ENST00000324306 HOMER1Q86YM7 354 aa11.47□□□□□ -0.57
ZKSCAN1-201ENST00000324306 MYO6Q9UM54 1294 aa11.46□□□□□ -0.57
ZKSCAN1-201ENST00000324306 NUP155O75694 1391 aa11.46□□□□□ -0.57
ZKSCAN1-201ENST00000324306 USP8P40818 1118 aa11.46□□□□□ -0.57
ZKSCAN1-201ENST00000324306 USP47Q96K76 1375 aa11.46□□□□□ -0.57
ZKSCAN1-201ENST00000324306 LEKR1Q6ZMV7 388 aa11.46□□□□□ -0.57
ZKSCAN1-201ENST00000324306 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.57
ZKSCAN1-201ENST00000324306 ZNF592Q92610 1267 aa11.46□□□□□ -0.58
ZKSCAN1-201ENST00000324306 PRKRIP1Q9H875 184 aaPredicted RBP11.46□□□□□ -0.58
ZKSCAN1-201ENST00000324306 NPHP1O15259 732 aa11.46□□□□□ -0.58
ZKSCAN1-201ENST00000324306 IFT57Q9NWB7 429 aa11.46□□□□□ -0.58
ZKSCAN1-201ENST00000324306 CCDC88BA6NC98 1476 aa11.45□□□□□ -0.58
ZKSCAN1-201ENST00000324306 ZKSCAN1P17029 563 aaPredicted RBP11.45□□□□□ -0.58
ZKSCAN1-201ENST00000324306 CCDC144AA2RUR9 1427 aa11.45□□□□□ -0.58
ZKSCAN1-201ENST00000324306 A0A0G2JS52 829 aa11.45□□□□□ -0.58
ZKSCAN1-201ENST00000324306 FAM184AQ8NB25 1140 aa11.45□□□□□ -0.58
ZKSCAN1-201ENST00000324306 KIF21BO75037 1637 aa11.45□□□□□ -0.58
ZKSCAN1-201ENST00000324306 APBB1O00213 710 aa11.44□□□□□ -0.58
ZKSCAN1-201ENST00000324306 INTS3Q68E01 1043 aaKnown RBP11.44□□□□□ -0.58
ZKSCAN1-201ENST00000324306 RAPGEF2Q9Y4G8 1499 aa11.44□□□□□ -0.58
ZKSCAN1-201ENST00000324306 MIA2Q96PC5 1412 aa11.44□□□□□ -0.58
ZKSCAN1-201ENST00000324306 RSPH4AQ5TD94 716 aa11.44□□□□□ -0.58
ZKSCAN1-201ENST00000324306 RNF20Q5VTR2 975 aa11.44□□□□□ -0.58
ZKSCAN1-201ENST00000324306 SASS6Q6UVJ0 657 aa11.44□□□□□ -0.58
ZKSCAN1-201ENST00000324306 BRD4O60885 1362 aaPredicted RBP11.43□□□□□ -0.58
ZKSCAN1-201ENST00000324306 SCAPERQ9BY12 1400 aa11.43□□□□□ -0.58
ZKSCAN1-201ENST00000324306 WIZO95785 1651 aa11.43□□□□□ -0.58
ZKSCAN1-201ENST00000324306 PDCL2Q8N4E4 241 aa11.43□□□□□ -0.58
ZKSCAN1-201ENST00000324306 CCDC47Q96A33 483 aaKnown RBP11.43□□□□□ -0.58
ZKSCAN1-201ENST00000324306 MCM2P49736 904 aa11.42□□□□□ -0.58
ZKSCAN1-201ENST00000324306 H0YHG0 523 aa11.42□□□□□ -0.58
ZKSCAN1-201ENST00000324306 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
ZKSCAN1-201ENST00000324306 GORABQ5T7V8 394 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms