RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 RBM10P98175 930 aaKnown RBP8.75□□□□□ -1.01
SMC1A-201ENST00000322213 CCDC39Q9UFE4 941 aa8.75□□□□□ -1.01
SMC1A-201ENST00000322213 SMG6Q86US8 1419 aaKnown RBP8.75□□□□□ -1.01
SMC1A-201ENST00000322213 SYNJ1O43426 1573 aa8.75□□□□□ -1.01
SMC1A-201ENST00000322213 CCDC173Q0VFZ6 552 aa8.75□□□□□ -1.01
SMC1A-201ENST00000322213 CWC15Q9P013 229 aaKnown RBP8.74□□□□□ -1.01
SMC1A-201ENST00000322213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.74□□□□□ -1.014e-7■■■■□ 21
SMC1A-201ENST00000322213 DDX49Q9Y6V7 483 aaKnown RBP8.74□□□□□ -1.01
SMC1A-201ENST00000322213 HMGN5P82970 282 aaKnown RBP8.74□□□□□ -1.01
SMC1A-201ENST00000322213 TPM4P67936 248 aa8.74□□□□□ -1.01
SMC1A-201ENST00000322213 PRKRIP1Q9H875 184 aaPredicted RBP8.74□□□□□ -1.01
SMC1A-201ENST00000322213 USP47Q96K76 1375 aa8.73□□□□□ -1.01
SMC1A-201ENST00000322213 RRBP1Q9P2E9 1410 aaKnown RBP8.73□□□□□ -1.01
SMC1A-201ENST00000322213 CENPJQ9HC77 1338 aaPredicted RBP8.73□□□□□ -1.01
SMC1A-201ENST00000322213 SLC4A3P48751 1232 aa8.73□□□□□ -1.01
SMC1A-201ENST00000322213 PTPN23Q9H3S7 1636 aa8.73□□□□□ -1.01
SMC1A-201ENST00000322213 GCC2Q8IWJ2 1684 aa8.73□□□□□ -1.01
SMC1A-201ENST00000322213 UACAQ9BZF9 1416 aa8.73□□□□□ -1.01
SMC1A-201ENST00000322213 CGNL1Q0VF96 1302 aa8.73□□□□□ -1.01
SMC1A-201ENST00000322213 BBXQ8WY36 941 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-201ENST00000322213 MYH8P13535 1937 aa8.72□□□□□ -1.01
SMC1A-201ENST00000322213 PEG3Q9GZU2 1588 aa8.72□□□□□ -1.01
SMC1A-201ENST00000322213 HECW1Q76N89 1606 aa8.72□□□□□ -1.01
SMC1A-201ENST00000322213 CHMP5Q9NZZ3 219 aa8.72□□□□□ -1.01
SMC1A-201ENST00000322213 GOLGA2Q08379 1002 aa8.72□□□□□ -1.01
SMC1A-201ENST00000322213 ITPRIPQ8IWB1 547 aa8.72□□□□□ -1.01
SMC1A-201ENST00000322213 DIAPH3Q9NSV4 1193 aa8.72□□□□□ -1.01
SMC1A-201ENST00000322213 CACNA1FO60840 1977 aa8.72□□□□□ -1.01
SMC1A-201ENST00000322213 KANK4Q5T7N3 995 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-201ENST00000322213 ATP6V1DQ9Y5K8 247 aa8.72□□□□□ -1.01
SMC1A-201ENST00000322213 CUX2O14529 1486 aa8.72□□□□□ -1.01
SMC1A-201ENST00000322213 FYCO1Q9BQS8 1478 aa8.72□□□□□ -1.01
SMC1A-201ENST00000322213 KCNJ4P48050 445 aa8.71□□□□□ -1.01
SMC1A-201ENST00000322213 AAMPQ13685 434 aa8.71□□□□□ -1.01
SMC1A-201ENST00000322213 NEUROD2Q15784 382 aa8.71□□□□□ -1.01
SMC1A-201ENST00000322213 CUL7Q14999 1698 aa8.71□□□□□ -1.02
SMC1A-201ENST00000322213 ANKRD30AQ9BXX3 1397 aa8.71□□□□□ -1.02
SMC1A-201ENST00000322213 FGD1P98174 961 aa8.71□□□□□ -1.02
SMC1A-201ENST00000322213 KIAA1211Q6ZU35 1233 aa8.71□□□□□ -1.02
SMC1A-201ENST00000322213 LRRC9Q6ZRR7 1453 aa8.71□□□□□ -1.02
SMC1A-201ENST00000322213 EXOC6Q8TAG9 804 aa8.7□□□□□ -1.02
SMC1A-201ENST00000322213 CRBNQ96SW2 442 aa8.7□□□□□ -1.02
SMC1A-201ENST00000322213 NINLQ9Y2I6 1382 aa8.7□□□□□ -1.02
SMC1A-201ENST00000322213 BRD4O60885 1362 aaPredicted RBP8.69□□□□□ -1.02
SMC1A-201ENST00000322213 MICAL3Q7RTP6 2002 aa8.69□□□□□ -1.02
SMC1A-201ENST00000322213 EFCAB5A4FU69 1503 aa8.69□□□□□ -1.02
SMC1A-201ENST00000322213 BACH2Q9BYV9 841 aa8.69□□□□□ -1.02
SMC1A-201ENST00000322213 HAP1P54257 671 aaPredicted RBP8.69□□□□□ -1.02
SMC1A-201ENST00000322213 FRAT2O75474 233 aaPredicted RBP8.68□□□□□ -1.02
SMC1A-201ENST00000322213 MYO10Q9HD67 2058 aa8.68□□□□□ -1.02
SMC1A-201ENST00000322213 UQCRHLA0A096LP55 91 aa8.68□□□□□ -1.02
SMC1A-201ENST00000322213 UQCRHP07919 91 aa8.68□□□□□ -1.02
SMC1A-201ENST00000322213 DCAF11Q8TEB1 546 aa8.68□□□□□ -1.02
SMC1A-201ENST00000322213 MYH9P35579 1960 aaKnown RBP8.68□□□□□ -1.02
SMC1A-201ENST00000322213 EHBP1L1Q8N3D4 1523 aa8.68□□□□□ -1.02
SMC1A-201ENST00000322213 CCDC7Q96M83 1385 aa8.68□□□□□ -1.02
SMC1A-201ENST00000322213 R3HCC1Q9Y3T6 440 aaKnown RBP8.68□□□□□ -1.02
SMC1A-201ENST00000322213 TRAK2O60296 914 aa8.68□□□□□ -1.02
SMC1A-201ENST00000322213 BIVM-ERCC5R4GMW8 1640 aa8.67□□□□□ -1.02
SMC1A-201ENST00000322213 CFDP1Q9UEE9 299 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-201ENST00000322213 ESPNB1AK53 854 aa8.67□□□□□ -1.02
SMC1A-201ENST00000322213 ARGLU1Q9NWB6 273 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-201ENST00000322213 FBLN2P98095 1184 aa8.67□□□□□ -1.02
SMC1A-201ENST00000322213 CARMIL1Q5VZK9 1371 aa8.67□□□□□ -1.02
SMC1A-201ENST00000322213 MYO5CQ9NQX4 1742 aa8.67□□□□□ -1.02
SMC1A-201ENST00000322213 PCF11O94913 1555 aaKnown RBP8.67□□□□□ -1.02
SMC1A-201ENST00000322213 MPHOSPH9Q99550 1183 aa8.66□□□□□ -1.02
SMC1A-201ENST00000322213 TPM3P06753 285 aa8.66□□□□□ -1.02
SMC1A-201ENST00000322213 TSPYL1Q9H0U9 437 aa8.66□□□□□ -1.02
SMC1A-201ENST00000322213 NUCB2P80303 420 aa8.66□□□□□ -1.02
SMC1A-201ENST00000322213 NOC3LQ8WTT2 800 aaKnown RBP8.66□□□□□ -1.02
SMC1A-201ENST00000322213 GRPEL1Q9HAV7 217 aa8.66□□□□□ -1.02
SMC1A-201ENST00000322213 GOLGA6L19H0YKK7 550 aa8.66□□□□□ -1.02
SMC1A-201ENST00000322213 E9PSI1 815 aa8.66□□□□□ -1.02
SMC1A-201ENST00000322213 CC2D2AQ9P2K1 1620 aa8.65□□□□□ -1.02
SMC1A-201ENST00000322213 RGL3Q3MIN7 710 aa8.65□□□□□ -1.02
SMC1A-201ENST00000322213 RUSC2Q8N2Y8 1516 aa8.65□□□□□ -1.02
SMC1A-201ENST00000322213 CHGAP10645 457 aaKnown RBP8.65□□□□□ -1.03
SMC1A-201ENST00000322213 PLIN1O60240 522 aa8.65□□□□□ -1.03
SMC1A-201ENST00000322213 OS9Q13438 667 aaPredicted RBP8.64□□□□□ -1.03
SMC1A-201ENST00000322213 KIF1BO60333 1816 aa8.64□□□□□ -1.03
SMC1A-201ENST00000322213 SMC4Q9NTJ3 1288 aa8.64□□□□□ -1.03
SMC1A-201ENST00000322213 C22orf23Q9BZE7 217 aa8.64□□□□□ -1.03
SMC1A-201ENST00000322213 FOXD4L1Q9NU39 408 aa8.64□□□□□ -1.03
SMC1A-201ENST00000322213 KIF14Q15058 1648 aa8.64□□□□□ -1.03
SMC1A-201ENST00000322213 GPATCH3Q96I76 525 aa8.63□□□□□ -1.03
SMC1A-201ENST00000322213 FGD6Q6ZV73 1430 aa8.63□□□□□ -1.03
SMC1A-201ENST00000322213 REC8O95072 547 aa8.63□□□□□ -1.03
SMC1A-201ENST00000322213 GNL2Q13823 731 aaKnown RBP8.63□□□□□ -1.03
SMC1A-201ENST00000322213 NGEFQ8N5V2 710 aa8.63□□□□□ -1.03
SMC1A-201ENST00000322213 NAP1L2Q9ULW6 460 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-201ENST00000322213 MYH11P35749 1972 aa8.63□□□□□ -1.03
SMC1A-201ENST00000322213 ARAP1Q96P48 1450 aa8.63□□□□□ -1.03
SMC1A-201ENST00000322213 WASHC2AQ641Q2 1341 aa8.63□□□□□ -1.03
SMC1A-201ENST00000322213 LETM1O95202 739 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-201ENST00000322213 KANK1Q14678 1352 aa8.63□□□□□ -1.03
SMC1A-201ENST00000322213 MCTP1Q6DN14 999 aa8.62□□□□□ -1.03
SMC1A-201ENST00000322213 CCDC70Q6NSX1 233 aa8.62□□□□□ -1.03
SMC1A-201ENST00000322213 STAG3Q9UJ98 1225 aa8.62□□□□□ -1.03
SMC1A-201ENST00000322213 ZNF592Q92610 1267 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms