RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 MYBBP1AQ9BQG0 1328 aaKnown RBP23.62■■□□□ 1.37
LTBP3-202ENST00000322147 TCERG1O14776 1098 aaKnown RBP23.61■■□□□ 1.37
LTBP3-202ENST00000322147 GZF1Q9H116 711 aaPredicted RBP23.6■■□□□ 1.37
LTBP3-202ENST00000322147 ITPRIPQ8IWB1 547 aa23.6■■□□□ 1.37
LTBP3-202ENST00000322147 HFM1A2PYH4 1435 aa23.59■■□□□ 1.37
LTBP3-202ENST00000322147 PDE4AP27815 886 aa23.56■■□□□ 1.36
LTBP3-202ENST00000322147 TMEM132EQ6IEE7 984 aa23.56■■□□□ 1.36
LTBP3-202ENST00000322147 COG6Q9Y2V7 657 aa23.56■■□□□ 1.36
LTBP3-202ENST00000322147 PCF11O94913 1555 aaKnown RBP23.56■■□□□ 1.36
LTBP3-202ENST00000322147 TRHP20396 242 aaPredicted RBP23.55■■□□□ 1.36
LTBP3-202ENST00000322147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.55■■□□□ 1.36
LTBP3-202ENST00000322147 KIF15Q9NS87 1388 aa23.55■■□□□ 1.36
LTBP3-202ENST00000322147 RRP1P56182 461 aaKnown RBP23.55■■□□□ 1.36
LTBP3-202ENST00000322147 SMC4Q9NTJ3 1288 aa23.54■■□□□ 1.36
LTBP3-202ENST00000322147 NAIPQ13075 1403 aa23.53■■□□□ 1.36
LTBP3-202ENST00000322147 CASKIN1Q8WXD9 1431 aa23.53■■□□□ 1.36
LTBP3-202ENST00000322147 CYB5RLQ6IPT4 315 aa23.53■■□□□ 1.36
LTBP3-202ENST00000322147 SMG6Q86US8 1419 aaKnown RBP23.52■■□□□ 1.36
LTBP3-202ENST00000322147 USP35Q9P2H5 1018 aa23.52■■□□□ 1.36
LTBP3-202ENST00000322147 PTPRKQ15262 1439 aa23.52■■□□□ 1.36
LTBP3-202ENST00000322147 MINK1Q8N4C8 1332 aaPredicted RBP23.5■■□□□ 1.35
LTBP3-202ENST00000322147 FOXD4L1Q9NU39 408 aa23.49■■□□□ 1.35
LTBP3-202ENST00000322147 MFAP1P55081 439 aaKnown RBP23.49■■□□□ 1.35
LTBP3-202ENST00000322147 ADAMTS8Q9UP79 889 aa23.49■■□□□ 1.35
LTBP3-202ENST00000322147 PRG4Q92954 1404 aaPredicted RBP23.48■■□□□ 1.35
LTBP3-202ENST00000322147 HSP90AB1P08238 724 aaKnown RBP23.48■■□□□ 1.35
LTBP3-202ENST00000322147 RSPH4AQ5TD94 716 aa23.48■■□□□ 1.35
LTBP3-202ENST00000322147 ANKRD50Q9ULJ7 1429 aa23.48■■□□□ 1.35
LTBP3-202ENST00000322147 FYCO1Q9BQS8 1478 aa23.47■■□□□ 1.35
LTBP3-202ENST00000322147 HDGFL2Q7Z4V5 671 aaPredicted RBP23.47■■□□□ 1.35
LTBP3-202ENST00000322147 CENPJQ9HC77 1338 aaPredicted RBP23.46■■□□□ 1.35
LTBP3-202ENST00000322147 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
LTBP3-202ENST00000322147 CFAP70Q5T0N1 1121 aa23.46■■□□□ 1.35
LTBP3-202ENST00000322147 SKAP1Q86WV1 359 aa23.46■■□□□ 1.35
LTBP3-202ENST00000322147 BRPF3Q9ULD4 1205 aa23.45■■□□□ 1.35
LTBP3-202ENST00000322147 LTV1Q96GA3 475 aaPredicted RBP23.45■■□□□ 1.34
LTBP3-202ENST00000322147 CC2D2AQ9P2K1 1620 aa23.44■■□□□ 1.34
LTBP3-202ENST00000322147 TRIM44Q96DX7 344 aaPredicted RBP23.43■■□□□ 1.34
LTBP3-202ENST00000322147 NCOA1Q15788 1441 aa23.43■■□□□ 1.34
LTBP3-202ENST00000322147 HAP1P54257 671 aaPredicted RBP23.43■■□□□ 1.34
LTBP3-202ENST00000322147 PTPN23Q9H3S7 1636 aa23.43■■□□□ 1.34
LTBP3-202ENST00000322147 PLCB2Q00722 1185 aa23.42■■□□□ 1.34
LTBP3-202ENST00000322147 PDE3BQ13370 1112 aa23.41■■□□□ 1.34
LTBP3-202ENST00000322147 GSE1Q14687 1217 aa23.4■■□□□ 1.34
LTBP3-202ENST00000322147 SLC4A10Q6U841 1118 aa23.4■■□□□ 1.34
LTBP3-202ENST00000322147 OS9Q13438 667 aaPredicted RBP23.39■■□□□ 1.34
LTBP3-202ENST00000322147 GOLGA6L22H0YM25 854 aa23.37■■□□□ 1.33
LTBP3-202ENST00000322147 GGNBP2Q9H3C7 697 aa23.37■■□□□ 1.33
LTBP3-202ENST00000322147 TOPBP1Q92547 1522 aa23.37■■□□□ 1.33
LTBP3-202ENST00000322147 BACH2Q9BYV9 841 aa23.37■■□□□ 1.33
LTBP3-202ENST00000322147 PRDM2Q13029 1718 aa23.36■■□□□ 1.33
LTBP3-202ENST00000322147 PANK1Q8TE04 598 aa23.36■■□□□ 1.33
LTBP3-202ENST00000322147 RWDD1Q9H446 243 aaPredicted RBP23.36■■□□□ 1.33
LTBP3-202ENST00000322147 HSCBQ8IWL3 235 aa23.34■■□□□ 1.33
LTBP3-202ENST00000322147 CFAP43Q8NDM7 1665 aa23.34■■□□□ 1.33
LTBP3-202ENST00000322147 PNISRQ8TF01 805 aaKnown RBP23.34■■□□□ 1.33
LTBP3-202ENST00000322147 RTF1Q92541 710 aaKnown RBP23.33■■□□□ 1.32
LTBP3-202ENST00000322147 MS4A1P11836 297 aa23.32■■□□□ 1.32
LTBP3-202ENST00000322147 NOL8Q76FK4 1167 aaKnown RBP23.32■■□□□ 1.32
LTBP3-202ENST00000322147 CABP2Q9NPB3 220 aa23.32■■□□□ 1.32
LTBP3-202ENST00000322147 TERF2IPQ9NYB0 399 aa23.32■■□□□ 1.32
LTBP3-202ENST00000322147 CDK13Q14004 1512 aaKnown RBP23.32■■□□□ 1.32
LTBP3-202ENST00000322147 NFKBIBQ15653 356 aa23.31■■□□□ 1.32
LTBP3-202ENST00000322147 SLC12A5Q9H2X9 1139 aa23.3■■□□□ 1.32
LTBP3-202ENST00000322147 IPO8O15397 1037 aaKnown RBP23.3■■□□□ 1.32
LTBP3-202ENST00000322147 HMOX1P09601 288 aa23.29■■□□□ 1.32
LTBP3-202ENST00000322147 CASC1Q6TDU7 716 aa23.29■■□□□ 1.32
LTBP3-202ENST00000322147 KCNJ4P48050 445 aa23.28■■□□□ 1.32
LTBP3-202ENST00000322147 NECTIN2Q92692 538 aa23.27■■□□□ 1.32
LTBP3-202ENST00000322147 PNNQ9H307 717 aaKnown RBP23.27■■□□□ 1.32
LTBP3-202ENST00000322147 EIF3AQ14152 1382 aaKnown RBP23.27■■□□□ 1.32
LTBP3-202ENST00000322147 RNF123Q5XPI4 1314 aa23.27■■□□□ 1.32
LTBP3-202ENST00000322147 NAP1L5Q96NT1 182 aaPredicted RBP23.26■■□□□ 1.31
LTBP3-202ENST00000322147 NAP1L2Q9ULW6 460 aaPredicted RBP23.26■■□□□ 1.31
LTBP3-202ENST00000322147 PTMAP06454 111 aaKnown RBP23.26■■□□□ 1.31
LTBP3-202ENST00000322147 MTHFSP49914 203 aa23.26■■□□□ 1.31
LTBP3-202ENST00000322147 FOXD4L5Q5VV16 416 aaPredicted RBP23.26■■□□□ 1.31
LTBP3-202ENST00000322147 FOXD4L4Q8WXT5 416 aaPredicted RBP23.26■■□□□ 1.31
LTBP3-202ENST00000322147 NGDNQ8NEJ9 315 aaKnown RBP23.25■■□□□ 1.31
LTBP3-202ENST00000322147 ZNF330Q9Y3S2 320 aaPredicted RBP23.25■■□□□ 1.31
LTBP3-202ENST00000322147 BCAR3O75815 825 aa23.24■■□□□ 1.31
LTBP3-202ENST00000322147 EFCAB5A4FU69 1503 aa23.23■■□□□ 1.31
LTBP3-202ENST00000322147 E9PSI1 815 aa23.22■■□□□ 1.31
LTBP3-202ENST00000322147 VGFO15240 615 aaPredicted RBP23.21■■□□□ 1.31
LTBP3-202ENST00000322147 FOXD4L6Q3SYB3 417 aaPredicted RBP23.21■■□□□ 1.31
LTBP3-202ENST00000322147 ANKRD45Q5TZF3 282 aa23.21■■□□□ 1.31
LTBP3-202ENST00000322147 FOXD4L3Q6VB84 417 aaPredicted RBP23.21■■□□□ 1.31
LTBP3-202ENST00000322147 CENPQQ7L2Z9 268 aaPredicted RBP23.21■■□□□ 1.31
LTBP3-202ENST00000322147 CGNL1Q0VF96 1302 aa23.21■■□□□ 1.31
LTBP3-202ENST00000322147 GRIN2BQ13224 1484 aa23.2■■□□□ 1.31
LTBP3-202ENST00000322147 PPP2R1AP30153 589 aa23.2■■□□□ 1.3
LTBP3-202ENST00000322147 FAM161AQ3B820 660 aa23.2■■□□□ 1.3
LTBP3-202ENST00000322147 PMFBP1Q8TBY8 1022 aa23.2■■□□□ 1.3
LTBP3-202ENST00000322147 RIPK4P57078 832 aa23.19■■□□□ 1.3
LTBP3-202ENST00000322147 KDM5BQ9UGL1 1544 aa23.18■■□□□ 1.3
LTBP3-202ENST00000322147 TCP11L2Q8N4U5 519 aa23.18■■□□□ 1.3
LTBP3-202ENST00000322147 FGD1P98174 961 aa23.18■■□□□ 1.3
LTBP3-202ENST00000322147 AMPHP49418 695 aa23.17■■□□□ 1.3
LTBP3-202ENST00000322147 DNTTIP2Q5QJE6 756 aaKnown RBP23.17■■□□□ 1.3
LTBP3-202ENST00000322147 EVC2Q86UK5 1308 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms