RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 ERCC6Q03468 1493 aa4.8□□□□□ -1.64
GEN1-201ENST00000317402 PRXQ9BXM0 1461 aa4.8□□□□□ -1.64
GEN1-201ENST00000317402 CHMP7Q8WUX9 453 aaPredicted RBP4.79□□□□□ -1.64
GEN1-201ENST00000317402 CRBNQ96SW2 442 aa4.79□□□□□ -1.64
GEN1-201ENST00000317402 MPHOSPH9Q99550 1183 aa4.79□□□□□ -1.64
GEN1-201ENST00000317402 CADPSQ9ULU8 1353 aa4.79□□□□□ -1.64
GEN1-201ENST00000317402 ITSN2Q9NZM3 1697 aa4.79□□□□□ -1.64
GEN1-201ENST00000317402 RGS3P49796 1198 aa4.79□□□□□ -1.64
GEN1-201ENST00000317402 MYH7BA7E2Y1 1941 aa4.79□□□□□ -1.64
GEN1-201ENST00000317402 BCAR3O75815 825 aa4.79□□□□□ -1.64
GEN1-201ENST00000317402 SETD5Q9C0A6 1442 aa4.79□□□□□ -1.64
GEN1-201ENST00000317402 HECW1Q76N89 1606 aa4.78□□□□□ -1.64
GEN1-201ENST00000317402 SOX12O15370 315 aa4.78□□□□□ -1.64
GEN1-201ENST00000317402 SPTBP11277 2137 aa4.78□□□□□ -1.64
GEN1-201ENST00000317402 KDM5BQ9UGL1 1544 aa4.78□□□□□ -1.64
GEN1-201ENST00000317402 SUPT6HQ7KZ85 1726 aaKnown RBP4.78□□□□□ -1.64
GEN1-201ENST00000317402 MYH14Q7Z406 1995 aaKnown RBP4.78□□□□□ -1.64
GEN1-201ENST00000317402 DCAF11Q8TEB1 546 aa4.78□□□□□ -1.64
GEN1-201ENST00000317402 MTUS2Q5JR59 1369 aa4.77□□□□□ -1.65
GEN1-201ENST00000317402 ABCA5Q8WWZ7 1642 aa4.77□□□□□ -1.65
GEN1-201ENST00000317402 TULP1O00294 542 aaPredicted RBP4.77□□□□□ -1.65
GEN1-201ENST00000317402 MPNDQ8N594 471 aa4.77□□□□□ -1.65
GEN1-201ENST00000317402 FANCD2Q9BXW9 1451 aa4.77□□□□□ -1.65
GEN1-201ENST00000317402 UBE2Q2Q8WVN8 375 aa4.77□□□□□ -1.65
GEN1-201ENST00000317402 GOLGB1Q14789 3259 aaKnown RBP4.77□□□□□ -1.65
GEN1-201ENST00000317402 PRG4Q92954 1404 aaPredicted RBP4.77□□□□□ -1.65
GEN1-201ENST00000317402 ST20-MTHFSA0A0A6YYL1 179 aa4.77□□□□□ -1.65
GEN1-201ENST00000317402 ZBTB9Q96C00 473 aa4.77□□□□□ -1.65
GEN1-201ENST00000317402 PRKRIP1Q9H875 184 aaPredicted RBP4.77□□□□□ -1.65
GEN1-201ENST00000317402 PKD2Q13563 968 aa4.76□□□□□ -1.65
GEN1-201ENST00000317402 PBRM1Q86U86 1689 aa4.76□□□□□ -1.65
GEN1-201ENST00000317402 HSP90AA1P07900 732 aaKnown RBP4.76□□□□□ -1.65
GEN1-201ENST00000317402 RTTNQ86VV8 2226 aa4.76□□□□□ -1.65
GEN1-201ENST00000317402 ZNF318Q5VUA4 2279 aa4.76□□□□□ -1.65
GEN1-201ENST00000317402 TONSLQ96HA7 1378 aa4.76□□□□□ -1.65
GEN1-201ENST00000317402 CLUAP1Q96AJ1 413 aa4.76□□□□□ -1.65
GEN1-201ENST00000317402 TRIM44Q96DX7 344 aaPredicted RBP4.76□□□□□ -1.65
GEN1-201ENST00000317402 TSPOAP1O95153 1857 aa4.75□□□□□ -1.65
GEN1-201ENST00000317402 NCKAP5LQ9HCH0 1330 aa4.75□□□□□ -1.65
GEN1-201ENST00000317402 EHBP1L1Q8N3D4 1523 aa4.75□□□□□ -1.65
GEN1-201ENST00000317402 IGHDP01880 384 aa4.75□□□□□ -1.65
GEN1-201ENST00000317402 PCF11O94913 1555 aaKnown RBP4.75□□□□□ -1.65
GEN1-201ENST00000317402 TMEM132EQ6IEE7 984 aa4.75□□□□□ -1.65
GEN1-201ENST00000317402 STK26Q9P289 416 aa4.75□□□□□ -1.65
GEN1-201ENST00000317402 TTC3P53804 2025 aa4.75□□□□□ -1.65
GEN1-201ENST00000317402 TIAM1Q13009 1591 aa4.75□□□□□ -1.65
GEN1-201ENST00000317402 ATAD2Q6PL18 1390 aa4.75□□□□□ -1.65
GEN1-201ENST00000317402 TRIP11Q15643 1979 aa4.75□□□□□ -1.65
GEN1-201ENST00000317402 ZBTB47Q9UFB7 747 aaPredicted RBP4.74□□□□□ -1.65
GEN1-201ENST00000317402 SAMD9Q5K651 1589 aa4.74□□□□□ -1.65
GEN1-201ENST00000317402 RRBP1Q9P2E9 1410 aaKnown RBP4.74□□□□□ -1.65
GEN1-201ENST00000317402 URB1O60287 2271 aaKnown RBP4.74□□□□□ -1.65
GEN1-201ENST00000317402 ANP32BQ92688 251 aaKnown RBP4.74□□□□□ -1.65
GEN1-201ENST00000317402 GCC2Q8IWJ2 1684 aa4.74□□□□□ -1.65
GEN1-201ENST00000317402 PDIA4P13667 645 aaKnown RBP4.74□□□□□ -1.65
GEN1-201ENST00000317402 GZF1Q9H116 711 aaPredicted RBP4.74□□□□□ -1.65
GEN1-201ENST00000317402 POLR1AO95602 1720 aaPredicted RBP4.74□□□□□ -1.65
GEN1-201ENST00000317402 LRRC9Q6ZRR7 1453 aa4.73□□□□□ -1.65
GEN1-201ENST00000317402 AFAP1Q8N556 730 aa4.73□□□□□ -1.65
GEN1-201ENST00000317402 RSPH6AQ9H0K4 717 aa4.73□□□□□ -1.65
GEN1-201ENST00000317402 URB2Q14146 1524 aaKnown RBP4.73□□□□□ -1.65
GEN1-201ENST00000317402 C14orf37Q86TY3 774 aa4.73□□□□□ -1.65
GEN1-201ENST00000317402 HSP90AA2PQ14568 343 aaPredicted RBP4.73□□□□□ -1.65
GEN1-201ENST00000317402 NCOR1O75376 2440 aa4.73□□□□□ -1.65
GEN1-201ENST00000317402 ADGBQ8N7X0 1667 aa4.73□□□□□ -1.65
GEN1-201ENST00000317402 FRAT2O75474 233 aaPredicted RBP4.72□□□□□ -1.65
GEN1-201ENST00000317402 MAGI1Q96QZ7 1491 aaPredicted RBP4.72□□□□□ -1.65
GEN1-201ENST00000317402 ZRANB1Q9UGI0 708 aa4.72□□□□□ -1.65
GEN1-201ENST00000317402 PLB1Q6P1J6 1458 aa4.72□□□□□ -1.65
GEN1-201ENST00000317402 ADAMTS8Q9UP79 889 aa4.72□□□□□ -1.65
GEN1-201ENST00000317402 CASKIN1Q8WXD9 1431 aa4.72□□□□□ -1.65
GEN1-201ENST00000317402 PANK1Q8TE04 598 aa4.72□□□□□ -1.65
GEN1-201ENST00000317402 FRAT1Q92837 279 aaPredicted RBP4.72□□□□□ -1.65
GEN1-201ENST00000317402 PTMSP20962 102 aa4.72□□□□□ -1.65
GEN1-201ENST00000317402 SLKQ9H2G2 1235 aaPredicted RBP4.72□□□□□ -1.65
GEN1-201ENST00000317402 GGT6Q6P531 493 aa4.72□□□□□ -1.65
GEN1-201ENST00000317402 IFT140Q96RY7 1462 aa4.72□□□□□ -1.65
GEN1-201ENST00000317402 MYH4Q9Y623 1939 aa4.71□□□□□ -1.65
GEN1-201ENST00000317402 CFDP1Q9UEE9 299 aaPredicted RBP4.71□□□□□ -1.66
GEN1-201ENST00000317402 WDR62O43379 1518 aa4.71□□□□□ -1.66
GEN1-201ENST00000317402 ZNF638Q14966 1978 aaKnown RBP4.71□□□□□ -1.66
GEN1-201ENST00000317402 DISP3Q9P2K9 1392 aa4.71□□□□□ -1.66
GEN1-201ENST00000317402 TOPBP1Q92547 1522 aa4.71□□□□□ -1.66
GEN1-201ENST00000317402 JPH4Q96JJ6 628 aa4.71□□□□□ -1.66
GEN1-201ENST00000317402 HOMEZQ8IX15 550 aa4.71□□□□□ -1.66
GEN1-201ENST00000317402 THUMPD2Q9BTF0 503 aaKnown RBP4.71□□□□□ -1.66
GEN1-201ENST00000317402 POLA1P09884 1462 aaPredicted RBP4.71□□□□□ -1.66
GEN1-201ENST00000317402 SCN2AQ99250 2005 aa4.71□□□□□ -1.66
GEN1-201ENST00000317402 IQGAP2Q13576 1575 aa4.71□□□□□ -1.66
GEN1-201ENST00000317402 MRC2Q9UBG0 1479 aa4.71□□□□□ -1.66
GEN1-201ENST00000317402 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.7□□□□□ -1.66
GEN1-201ENST00000317402 APPP05067 770 aa4.7□□□□□ -1.66
GEN1-201ENST00000317402 C1orf115Q9H7X2 142 aa4.7□□□□□ -1.66
GEN1-201ENST00000317402 CCDC7Q96M83 1385 aa4.7□□□□□ -1.66
GEN1-201ENST00000317402 FOXD4L5Q5VV16 416 aaPredicted RBP4.7□□□□□ -1.66
GEN1-201ENST00000317402 FOXD4L4Q8WXT5 416 aaPredicted RBP4.7□□□□□ -1.66
GEN1-201ENST00000317402 NOP58Q9Y2X3 529 aaKnown RBP4.7□□□□□ -1.66
GEN1-201ENST00000317402 ELL2O00472 640 aaPredicted RBP4.7□□□□□ -1.66
GEN1-201ENST00000317402 CARD11Q9BXL7 1154 aa4.7□□□□□ -1.66
GEN1-201ENST00000317402 PANK3Q9H999 370 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms