RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 U2AF1L5P0DN76 240 aaPredicted RBP17.86■□□□□ 0.45
DDX54-202ENST00000314045 U2AF1Q01081 240 aaKnown RBP eCLIP17.86■□□□□ 0.45
DDX54-202ENST00000314045 ADAMTS12P58397 1594 aa17.85■□□□□ 0.45
DDX54-202ENST00000314045 CAMSAP2Q08AD1 1489 aa17.85■□□□□ 0.45
DDX54-202ENST00000314045 WDR62O43379 1518 aa17.85■□□□□ 0.45
DDX54-202ENST00000314045 CCDC141Q6ZP82 1450 aa17.85■□□□□ 0.45
DDX54-202ENST00000314045 PAK3O75914 559 aaPredicted RBP17.84■□□□□ 0.45
DDX54-202ENST00000314045 CD109Q6YHK3 1445 aa17.84■□□□□ 0.45
DDX54-202ENST00000314045 NBPF8Q3BBV2 869 aa17.84■□□□□ 0.45
DDX54-202ENST00000314045 MINK1Q8N4C8 1332 aaPredicted RBP17.84■□□□□ 0.45
DDX54-202ENST00000314045 PTPN23Q9H3S7 1636 aa17.84■□□□□ 0.45
DDX54-202ENST00000314045 EVC2Q86UK5 1308 aa17.83■□□□□ 0.44
DDX54-202ENST00000314045 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.44
DDX54-202ENST00000314045 KIF7Q2M1P5 1343 aa17.82■□□□□ 0.44
DDX54-202ENST00000314045 ATP10BO94823 1461 aa17.82■□□□□ 0.44
DDX54-202ENST00000314045 FRAT1Q92837 279 aaPredicted RBP17.82■□□□□ 0.44
DDX54-202ENST00000314045 CFAP70Q5T0N1 1121 aa17.82■□□□□ 0.44
DDX54-202ENST00000314045 NGDNQ8NEJ9 315 aaKnown RBP17.81■□□□□ 0.44
DDX54-202ENST00000314045 UPF2Q9HAU5 1272 aaKnown RBP17.81■□□□□ 0.44
DDX54-202ENST00000314045 TMEM132EQ6IEE7 984 aa17.81■□□□□ 0.44
DDX54-202ENST00000314045 MYH16Q9H6N6 1097 aa17.81■□□□□ 0.44
DDX54-202ENST00000314045 UGGT2Q9NYU1 1516 aa17.81■□□□□ 0.44
DDX54-202ENST00000314045 KIF14Q15058 1648 aa17.81■□□□□ 0.44
DDX54-202ENST00000314045 CCDC7Q96M83 1385 aa17.81■□□□□ 0.44
DDX54-202ENST00000314045 NUP153P49790 1475 aaKnown RBP17.81■□□□□ 0.44
DDX54-202ENST00000314045 NCOA1Q15788 1441 aa17.8■□□□□ 0.44
DDX54-202ENST00000314045 NBPF1Q3BBV0 1214 aa17.8■□□□□ 0.44
DDX54-202ENST00000314045 FTSJ3Q8IY81 847 aaKnown RBP17.8■□□□□ 0.44
DDX54-202ENST00000314045 EIF4G3O43432 1585 aaKnown RBP17.8■□□□□ 0.44
DDX54-202ENST00000314045 CENPJQ9HC77 1338 aaPredicted RBP17.8■□□□□ 0.44
DDX54-202ENST00000314045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.79■□□□□ 0.44
DDX54-202ENST00000314045 AKNAQ7Z591 1439 aa17.79■□□□□ 0.44
DDX54-202ENST00000314045 MYBBP1AQ9BQG0 1328 aaKnown RBP17.79■□□□□ 0.44
DDX54-202ENST00000314045 PPP4R2Q9NY27 417 aa17.78■□□□□ 0.44
DDX54-202ENST00000314045 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.78■□□□□ 0.44
DDX54-202ENST00000314045 GPATCH8Q9UKJ3 1502 aaKnown RBP17.78■□□□□ 0.44
DDX54-202ENST00000314045 WASHC2AQ641Q2 1341 aa17.77■□□□□ 0.43
DDX54-202ENST00000314045 RAPGEF6Q8TEU7 1601 aa17.76■□□□□ 0.43
DDX54-202ENST00000314045 CTTNBP2Q8WZ74 1663 aa17.75■□□□□ 0.43
DDX54-202ENST00000314045 ADGRL1O94910 1474 aa17.74■□□□□ 0.43
DDX54-202ENST00000314045 SLC52A1Q9NWF4 448 aa17.74■□□□□ 0.43
DDX54-202ENST00000314045 NUP160Q12769 1436 aa17.74■□□□□ 0.43
DDX54-202ENST00000314045 CGNL1Q0VF96 1302 aa17.73■□□□□ 0.43
DDX54-202ENST00000314045 CCDC146Q8IYE0 955 aa17.72■□□□□ 0.43
DDX54-202ENST00000314045 ABCA5Q8WWZ7 1642 aa17.72■□□□□ 0.43
DDX54-202ENST00000314045 ANKRD30BQ9BXX2 1392 aa17.72■□□□□ 0.43
DDX54-202ENST00000314045 B4GALNT3Q6L9W6 998 aa17.72■□□□□ 0.43
DDX54-202ENST00000314045 KIAA0556O60303 1618 aa17.71■□□□□ 0.43
DDX54-202ENST00000314045 PTPRKQ15262 1439 aa17.69■□□□□ 0.42
DDX54-202ENST00000314045 RCAN3Q9UKA8 241 aa17.69■□□□□ 0.42
DDX54-202ENST00000314045 FANCAO15360 1455 aa17.69■□□□□ 0.42
DDX54-202ENST00000314045 RTF1Q92541 710 aaKnown RBP17.69■□□□□ 0.42
DDX54-202ENST00000314045 MS4A1P11836 297 aa17.68■□□□□ 0.42
DDX54-202ENST00000314045 DISP1Q96F81 1524 aa17.67■□□□□ 0.42
DDX54-202ENST00000314045 GOLGA2Q08379 1002 aa17.67■□□□□ 0.42
DDX54-202ENST00000314045 ARXQ96QS3 562 aa17.66■□□□□ 0.42
DDX54-202ENST00000314045 TXNDC2Q86VQ3 553 aa17.66■□□□□ 0.42
DDX54-202ENST00000314045 HSP90AA1P07900 732 aaKnown RBP17.65■□□□□ 0.42
DDX54-202ENST00000314045 AMPHP49418 695 aa17.65■□□□□ 0.42
DDX54-202ENST00000314045 CNTLNQ9NXG0 1405 aa17.65■□□□□ 0.42
DDX54-202ENST00000314045 PLCH2O75038 1416 aa17.65■□□□□ 0.42
DDX54-202ENST00000314045 ASXL2Q76L83 1435 aa17.65■□□□□ 0.42
DDX54-202ENST00000314045 PDE3BQ13370 1112 aa17.64■□□□□ 0.41
DDX54-202ENST00000314045 COG3Q96JB2 828 aa17.64■□□□□ 0.41
DDX54-202ENST00000314045 CABP2Q9NPB3 220 aa17.64■□□□□ 0.41
DDX54-202ENST00000314045 TARBP1Q13395 1621 aaKnown RBP17.64■□□□□ 0.41
DDX54-202ENST00000314045 WDR97A6NE52 1622 aa17.64■□□□□ 0.41
DDX54-202ENST00000314045 CALD1Q05682 793 aaKnown RBP17.63■□□□□ 0.41
DDX54-202ENST00000314045 CSB-PGBD3P0DP91 1061 aa17.62■□□□□ 0.41
DDX54-202ENST00000314045 PBRM1Q86U86 1689 aa17.62■□□□□ 0.41
DDX54-202ENST00000314045 ERBINQ96RT1 1412 aa17.61■□□□□ 0.41
DDX54-202ENST00000314045 RGS3P49796 1198 aa17.61■□□□□ 0.41
DDX54-202ENST00000314045 LTV1Q96GA3 475 aaPredicted RBP17.61■□□□□ 0.41
DDX54-202ENST00000314045 CHMP4BQ9H444 224 aaKnown RBP17.61■□□□□ 0.41
DDX54-202ENST00000314045 RRP7AQ9Y3A4 280 aaKnown RBP17.61■□□□□ 0.41
DDX54-202ENST00000314045 DENND4BO75064 1496 aaPredicted RBP17.6■□□□□ 0.41
DDX54-202ENST00000314045 RPGRIP1LQ68CZ1 1315 aa17.6■□□□□ 0.41
DDX54-202ENST00000314045 PRAM1Q96QH2 718 aa17.59■□□□□ 0.41
DDX54-202ENST00000314045 DHX29Q7Z478 1369 aaKnown RBP17.58■□□□□ 0.41
DDX54-202ENST00000314045 THEMISQ8N1K5 641 aaPredicted RBP17.58■□□□□ 0.41
DDX54-202ENST00000314045 APAF1O14727 1248 aa17.57■□□□□ 0.4
DDX54-202ENST00000314045 GGNBP2Q9H3C7 697 aa17.57■□□□□ 0.4
DDX54-202ENST00000314045 IPO8O15397 1037 aaKnown RBP17.56■□□□□ 0.4
DDX54-202ENST00000314045 SLC12A5Q9H2X9 1139 aa17.56■□□□□ 0.4
DDX54-202ENST00000314045 ZBED9Q6R2W3 1325 aa17.56■□□□□ 0.4
DDX54-202ENST00000314045 WDR7Q9Y4E6 1490 aa17.55■□□□□ 0.4
DDX54-202ENST00000314045 ERICH6BQ5W0A0 696 aa17.55■□□□□ 0.4
DDX54-202ENST00000314045 POGZQ7Z3K3 1410 aa17.54■□□□□ 0.4
DDX54-202ENST00000314045 IDI1Q13907 227 aa17.54■□□□□ 0.4
DDX54-202ENST00000314045 FBXO31Q5XUX0 539 aaPredicted RBP17.53■□□□□ 0.4
DDX54-202ENST00000314045 SLC26A8Q96RN1 970 aa17.53■□□□□ 0.4
DDX54-202ENST00000314045 RPRD2Q5VT52 1461 aaKnown RBP17.52■□□□□ 0.4
DDX54-202ENST00000314045 DIAPH1O60610 1272 aaKnown RBP17.52■□□□□ 0.4
DDX54-202ENST00000314045 LMOD3Q0VAK6 560 aa17.52■□□□□ 0.39
DDX54-202ENST00000314045 TRAPPC8Q9Y2L5 1435 aa17.51■□□□□ 0.39
DDX54-202ENST00000314045 TCOF1Q13428 1488 aaKnown RBP17.51■□□□□ 0.39
DDX54-202ENST00000314045 CEP170Q5SW79 1584 aa17.51■□□□□ 0.39
DDX54-202ENST00000314045 CFAP43Q8NDM7 1665 aa17.51■□□□□ 0.39
DDX54-202ENST00000314045 SYCP2Q9BX26 1530 aa17.51■□□□□ 0.39
DDX54-202ENST00000314045 PSME1Q06323 249 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms