RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 POLA1P09884 1462 aaPredicted RBP19.3■□□□□ 0.68
LEMD3-201ENST00000308330 HDGFL2Q7Z4V5 671 aaPredicted RBP19.3■□□□□ 0.68
LEMD3-201ENST00000308330 MORC1Q86VD1 984 aa19.29■□□□□ 0.68
LEMD3-201ENST00000308330 CHMP4BQ9H444 224 aaKnown RBP19.29■□□□□ 0.68
LEMD3-201ENST00000308330 MAPK8IP2Q13387 824 aaPredicted RBP19.29■□□□□ 0.68
LEMD3-201ENST00000308330 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
LEMD3-201ENST00000308330 L3MBTL2Q969R5 705 aa19.29■□□□□ 0.68
LEMD3-201ENST00000308330 AAMPQ13685 434 aa19.28■□□□□ 0.68
LEMD3-201ENST00000308330 AFAP1Q8N556 730 aa19.28■□□□□ 0.68
LEMD3-201ENST00000308330 HSPA5P11021 654 aaKnown RBP19.28■□□□□ 0.68
LEMD3-201ENST00000308330 RGS3P49796 1198 aa19.27■□□□□ 0.68
LEMD3-201ENST00000308330 ROCK2O75116 1388 aaKnown RBP19.26■□□□□ 0.67
LEMD3-201ENST00000308330 CCDC66A2RUB6 948 aa19.25■□□□□ 0.67
LEMD3-201ENST00000308330 TULP1O00294 542 aaPredicted RBP19.25■□□□□ 0.67
LEMD3-201ENST00000308330 AEBP1Q8IUX7 1158 aa19.25■□□□□ 0.67
LEMD3-201ENST00000308330 PLCD3Q8N3E9 789 aa19.25■□□□□ 0.67
LEMD3-201ENST00000308330 CCER2I3L3R5 266 aa19.25■□□□□ 0.67
LEMD3-201ENST00000308330 NFKBIBQ15653 356 aa19.25■□□□□ 0.67
LEMD3-201ENST00000308330 KIAA2012Q0VF49 1180 aa19.24■□□□□ 0.67
LEMD3-201ENST00000308330 TRAK1Q9UPV9 953 aa19.24■□□□□ 0.67
LEMD3-201ENST00000308330 NGDNQ8NEJ9 315 aaKnown RBP19.24■□□□□ 0.67
LEMD3-201ENST00000308330 IRX3P78415 501 aaPredicted RBP19.23■□□□□ 0.67
LEMD3-201ENST00000308330 ZHX1Q9UKY1 873 aaPredicted RBP19.23■□□□□ 0.67
LEMD3-201ENST00000308330 GOLGA6L6A8MZA4 724 aa19.23■□□□□ 0.67
LEMD3-201ENST00000308330 CSB-PGBD3P0DP91 1061 aa19.22■□□□□ 0.67
LEMD3-201ENST00000308330 SNAPC4Q5SXM2 1469 aa19.21■□□□□ 0.67
LEMD3-201ENST00000308330 SLKQ9H2G2 1235 aaPredicted RBP19.21■□□□□ 0.67
LEMD3-201ENST00000308330 VGFO15240 615 aaPredicted RBP19.2■□□□□ 0.66
LEMD3-201ENST00000308330 GOLGA6L1Q8N7Z2 621 aa19.19■□□□□ 0.66
LEMD3-201ENST00000308330 NPHP1O15259 732 aa19.19■□□□□ 0.66
LEMD3-201ENST00000308330 CCDC9Q9Y3X0 531 aaKnown RBP19.17■□□□□ 0.66
LEMD3-201ENST00000308330 CCDC144AA2RUR9 1427 aa19.16■□□□□ 0.66
LEMD3-201ENST00000308330 CUX1P39880 1505 aa19.16■□□□□ 0.66
LEMD3-201ENST00000308330 SYNJ1O43426 1573 aa19.16■□□□□ 0.66
LEMD3-201ENST00000308330 MYOM3Q5VTT5 1437 aa19.15■□□□□ 0.66
LEMD3-201ENST00000308330 TERF2IPQ9NYB0 399 aa19.15■□□□□ 0.66
LEMD3-201ENST00000308330 SYNJ2O15056 1496 aa19.14■□□□□ 0.65
LEMD3-201ENST00000308330 R3HCC1Q9Y3T6 440 aaKnown RBP19.14■□□□□ 0.65
LEMD3-201ENST00000308330 CSPP1Q1MSJ5 1256 aa19.13■□□□□ 0.65
LEMD3-201ENST00000308330 PLCB2Q00722 1185 aa19.13■□□□□ 0.65
LEMD3-201ENST00000308330 DHX37Q8IY37 1157 aaKnown RBP19.13■□□□□ 0.65
LEMD3-201ENST00000308330 CALD1Q05682 793 aaKnown RBP19.12■□□□□ 0.65
LEMD3-201ENST00000308330 KIF15Q9NS87 1388 aa19.12■□□□□ 0.65
LEMD3-201ENST00000308330 E9PSI1 815 aa19.11■□□□□ 0.65
LEMD3-201ENST00000308330 CHMP4AQ9BY43 222 aa19.11■□□□□ 0.65
LEMD3-201ENST00000308330 PRDM10Q9NQV6 1147 aa19.11■□□□□ 0.65
LEMD3-201ENST00000308330 FTSJ3Q8IY81 847 aaKnown RBP19.1■□□□□ 0.65
LEMD3-201ENST00000308330 PRDM2Q13029 1718 aa19.1■□□□□ 0.65
LEMD3-201ENST00000308330 SLC4A3P48751 1232 aa19.1■□□□□ 0.65
LEMD3-201ENST00000308330 EIF3AQ14152 1382 aaKnown RBP19.1■□□□□ 0.65
LEMD3-201ENST00000308330 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
LEMD3-201ENST00000308330 RAPGEF3O95398 923 aa19.09■□□□□ 0.65
LEMD3-201ENST00000308330 DNMBPQ6XZF7 1577 aa19.09■□□□□ 0.65
LEMD3-201ENST00000308330 U2AF1L5P0DN76 240 aaPredicted RBP19.09■□□□□ 0.65
LEMD3-201ENST00000308330 PDE4AP27815 886 aa19.09■□□□□ 0.65
LEMD3-201ENST00000308330 U2AF1Q01081 240 aaKnown RBP eCLIP19.09■□□□□ 0.65
LEMD3-201ENST00000308330 RTF1Q92541 710 aaKnown RBP19.09■□□□□ 0.65
LEMD3-201ENST00000308330 GBP4Q96PP9 640 aa19.08■□□□□ 0.65
LEMD3-201ENST00000308330 KIAA1211Q6ZU35 1233 aa19.08■□□□□ 0.64
LEMD3-201ENST00000308330 C11orf95C9JLR9 678 aaPredicted RBP19.07■□□□□ 0.64
LEMD3-201ENST00000308330 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.07■□□□□ 0.642e-6■■■□□ 16.7
LEMD3-201ENST00000308330 SPRYD3Q8NCJ5 442 aa19.07■□□□□ 0.64
LEMD3-201ENST00000308330 HSP90B1P14625 803 aaKnown RBP19.05■□□□□ 0.64
LEMD3-201ENST00000308330 CASKIN1Q8WXD9 1431 aa19.05■□□□□ 0.64
LEMD3-201ENST00000308330 ST20-MTHFSA0A0A6YYL1 179 aa19.05■□□□□ 0.64
LEMD3-201ENST00000308330 FGD6Q6ZV73 1430 aa19.04■□□□□ 0.64
LEMD3-201ENST00000308330 SETQ01105 290 aaPredicted RBP19.04■□□□□ 0.64
LEMD3-201ENST00000308330 WWC1Q8IX03 1113 aa19.04■□□□□ 0.64
LEMD3-201ENST00000308330 MINK1Q8N4C8 1332 aaPredicted RBP19.04■□□□□ 0.64
LEMD3-201ENST00000308330 IPO4Q8TEX9 1081 aaKnown RBP19.03■□□□□ 0.64
LEMD3-201ENST00000308330 LTV1Q96GA3 475 aaPredicted RBP19.03■□□□□ 0.64
LEMD3-201ENST00000308330 PHLDB1Q86UU1 1377 aa19.03■□□□□ 0.64
LEMD3-201ENST00000308330 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
LEMD3-201ENST00000308330 MRE11P49959 708 aa19.02■□□□□ 0.64
LEMD3-201ENST00000308330 CGNQ9P2M7 1197 aaKnown RBP19.02■□□□□ 0.64
LEMD3-201ENST00000308330 AMPHP49418 695 aa19.02■□□□□ 0.64
LEMD3-201ENST00000308330 HSCBQ8IWL3 235 aa19.02■□□□□ 0.64
LEMD3-201ENST00000308330 HSP90AB1P08238 724 aaKnown RBP19.02■□□□□ 0.63
LEMD3-201ENST00000308330 UACAQ9BZF9 1416 aa19.01■□□□□ 0.63
LEMD3-201ENST00000308330 TOP2BQ02880 1626 aa19.01■□□□□ 0.63
LEMD3-201ENST00000308330 PRXQ9BXM0 1461 aa19.01■□□□□ 0.63
LEMD3-201ENST00000308330 ARHGAP5Q13017 1502 aa19■□□□□ 0.63
LEMD3-201ENST00000308330 ABCF1Q8NE71 845 aaKnown RBP eCLIP19■□□□□ 0.63
LEMD3-201ENST00000308330 KIAA0586Q9BVV6 1533 aa18.99■□□□□ 0.63
LEMD3-201ENST00000308330 KIF21BO75037 1637 aa18.99■□□□□ 0.63
LEMD3-201ENST00000308330 ANKRD50Q9ULJ7 1429 aa18.99■□□□□ 0.63
LEMD3-201ENST00000308330 TSPYL1Q9H0U9 437 aa18.99■□□□□ 0.63
LEMD3-201ENST00000308330 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
LEMD3-201ENST00000308330 SCAPERQ9BY12 1400 aa18.99■□□□□ 0.63
LEMD3-201ENST00000308330 NOM1Q5C9Z4 860 aaKnown RBP18.99■□□□□ 0.63
LEMD3-201ENST00000308330 ESPNB1AK53 854 aa18.98■□□□□ 0.63
LEMD3-201ENST00000308330 ZNF330Q9Y3S2 320 aaPredicted RBP18.98■□□□□ 0.63
LEMD3-201ENST00000308330 NCOA2Q15596 1464 aa18.98■□□□□ 0.63
LEMD3-201ENST00000308330 LRRC9Q6ZRR7 1453 aa18.97■□□□□ 0.63
LEMD3-201ENST00000308330 DDX11L8A8MPP1 907 aa18.97■□□□□ 0.63
LEMD3-201ENST00000308330 ABCA10Q8WWZ4 1543 aa18.96■□□□□ 0.63
LEMD3-201ENST00000308330 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
LEMD3-201ENST00000308330 CLGNO14967 610 aa18.95■□□□□ 0.62
LEMD3-201ENST00000308330 TXNDC2Q86VQ3 553 aa18.94■□□□□ 0.62
LEMD3-201ENST00000308330 EVC2Q86UK5 1308 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms