RNA–Protein interactions for RNA: ENST00000308020.5

PTDSS2-201, Transcript of phosphatidylserine synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTDSS2, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS2-201ENST00000308020 ARHGEF12Q9NZN5 1544 aa28.58■■■□□ 2.17
PTDSS2-201ENST00000308020 RALGAPBQ86X10 1494 aa28.57■■■□□ 2.16
PTDSS2-201ENST00000308020 MYO5CQ9NQX4 1742 aa28.56■■■□□ 2.16
PTDSS2-201ENST00000308020 B4GALNT3Q6L9W6 998 aa28.55■■■□□ 2.16
PTDSS2-201ENST00000308020 ARID4BQ4LE39 1312 aaPredicted RBP28.54■■■□□ 2.16
PTDSS2-201ENST00000308020 MSH5O43196 834 aa28.54■■■□□ 2.16
PTDSS2-201ENST00000308020 RGL3Q3MIN7 710 aa28.53■■■□□ 2.16
PTDSS2-201ENST00000308020 ST20-MTHFSA0A0A6YYL1 179 aa28.52■■■□□ 2.16
PTDSS2-201ENST00000308020 CCDC144AA2RUR9 1427 aa28.52■■■□□ 2.16
PTDSS2-201ENST00000308020 MAST1Q9Y2H9 1570 aa28.51■■■□□ 2.15
PTDSS2-201ENST00000308020 PLEKHH2Q8IVE3 1493 aa28.5■■■□□ 2.15
PTDSS2-201ENST00000308020 ZCCHC11Q5TAX3 1644 aaKnown RBP28.48■■■□□ 2.15
PTDSS2-201ENST00000308020 EFCAB2Q5VUJ9 269 aa28.48■■■□□ 2.15
PTDSS2-201ENST00000308020 PLCH2O75038 1416 aa28.48■■■□□ 2.15
PTDSS2-201ENST00000308020 FANCIQ9NVI1 1328 aa28.47■■■□□ 2.15
PTDSS2-201ENST00000308020 ROCK2O75116 1388 aaKnown RBP28.47■■■□□ 2.15
PTDSS2-201ENST00000308020 CLASP1Q7Z460 1538 aa28.47■■■□□ 2.15
PTDSS2-201ENST00000308020 SENP3-EIF4A1A0A087X0R7 540 aa28.47■■■□□ 2.15
PTDSS2-201ENST00000308020 SMG6Q86US8 1419 aaKnown RBP28.47■■■□□ 2.15
PTDSS2-201ENST00000308020 UNC13BO14795 1591 aa28.44■■■□□ 2.14
PTDSS2-201ENST00000308020 PLA2R1Q13018 1463 aa28.44■■■□□ 2.14
PTDSS2-201ENST00000308020 TMC1Q8TDI8 760 aa28.43■■■□□ 2.14
PTDSS2-201ENST00000308020 PNISRQ8TF01 805 aaKnown RBP28.43■■■□□ 2.14
PTDSS2-201ENST00000308020 PLXNC1O60486 1568 aa28.43■■■□□ 2.14
PTDSS2-201ENST00000308020 NUDCQ9Y266 331 aa28.42■■■□□ 2.14
PTDSS2-201ENST00000308020 UHRF1BP1LA0JNW5 1464 aa28.41■■■□□ 2.14
PTDSS2-201ENST00000308020 DUOX2Q9NRD8 1548 aa28.4■■■□□ 2.14
PTDSS2-201ENST00000308020 PRAG1Q86YV5 1406 aa28.38■■■□□ 2.13
PTDSS2-201ENST00000308020 TRAPPC8Q9Y2L5 1435 aa28.38■■■□□ 2.13
PTDSS2-201ENST00000308020 NBPF1Q3BBV0 1214 aa28.38■■■□□ 2.13
PTDSS2-201ENST00000308020 IQGAP3Q86VI3 1631 aa28.36■■■□□ 2.13
PTDSS2-201ENST00000308020 ERBINQ96RT1 1412 aa28.35■■■□□ 2.13
PTDSS2-201ENST00000308020 AFAP1Q8N556 730 aa28.34■■■□□ 2.13
PTDSS2-201ENST00000308020 ABCC1P33527 1531 aa28.33■■■□□ 2.13
PTDSS2-201ENST00000308020 A2MP01023 1474 aa28.32■■■□□ 2.12
PTDSS2-201ENST00000308020 RNF123Q5XPI4 1314 aa28.31■■■□□ 2.12
PTDSS2-201ENST00000308020 TRPM1Q7Z4N2 1603 aa28.3■■■□□ 2.12
PTDSS2-201ENST00000308020 SPAG9O60271 1321 aaKnown RBP28.3■■■□□ 2.12
PTDSS2-201ENST00000308020 MYBBP1AQ9BQG0 1328 aaKnown RBP28.29■■■□□ 2.12
PTDSS2-201ENST00000308020 MAGI2Q86UL8 1455 aa28.28■■■□□ 2.12
PTDSS2-201ENST00000308020 RALBP1Q15311 655 aa28.27■■■□□ 2.12
PTDSS2-201ENST00000308020 BRD4O60885 1362 aaPredicted RBP28.26■■■□□ 2.11
PTDSS2-201ENST00000308020 LRPPRCP42704 1394 aaKnown RBP28.26■■■□□ 2.11
PTDSS2-201ENST00000308020 ERICH6Q7L0X2 663 aa28.24■■■□□ 2.11
PTDSS2-201ENST00000308020 CCDC136Q96JN2 1154 aa28.23■■■□□ 2.11
PTDSS2-201ENST00000308020 KTN1Q86UP2 1357 aaKnown RBP28.23■■■□□ 2.11
PTDSS2-201ENST00000308020 ATP10AO60312 1499 aa28.22■■■□□ 2.11
PTDSS2-201ENST00000308020 GPRASP1Q5JY77 1395 aa28.21■■■□□ 2.11
PTDSS2-201ENST00000308020 E9PCH4 1651 aa28.2■■■□□ 2.11
PTDSS2-201ENST00000308020 WDR7Q9Y4E6 1490 aa28.19■■■□□ 2.1
PTDSS2-201ENST00000308020 MYT1LQ9UL68 1186 aa28.19■■■□□ 2.1
PTDSS2-201ENST00000308020 RTEL1-TNFRSF6BF6WH68 1400 aa28.16■■■□□ 2.1
PTDSS2-201ENST00000308020 ZFYVE16Q7Z3T8 1539 aa28.16■■■□□ 2.1
PTDSS2-201ENST00000308020 TESK2Q96S53 571 aa28.16■■■□□ 2.1
PTDSS2-201ENST00000308020 FANCAO15360 1455 aa28.15■■■□□ 2.1
PTDSS2-201ENST00000308020 ARAP3Q8WWN8 1544 aa28.14■■■□□ 2.1
PTDSS2-201ENST00000308020 NLRP13Q86W25 1043 aa28.13■■■□□ 2.09
PTDSS2-201ENST00000308020 SALL2Q9Y467 1007 aaPredicted RBP28.13■■■□□ 2.09
PTDSS2-201ENST00000308020 PRDM15P57071 1507 aaPredicted RBP28.13■■■□□ 2.09
PTDSS2-201ENST00000308020 DISP3Q9P2K9 1392 aa28.13■■■□□ 2.09
PTDSS2-201ENST00000308020 PARD3Q8TEW0 1356 aa28.12■■■□□ 2.09
PTDSS2-201ENST00000308020 PER1O15534 1290 aaPredicted RBP28.11■■■□□ 2.09
PTDSS2-201ENST00000308020 EIF2AK4Q9P2K8 1649 aaKnown RBP28.11■■■□□ 2.09
PTDSS2-201ENST00000308020 KIF3BO15066 747 aa28.08■■■□□ 2.09
PTDSS2-201ENST00000308020 SCAPERQ9BY12 1400 aa28.08■■■□□ 2.09
PTDSS2-201ENST00000308020 COL17A1Q9UMD9 1497 aaPredicted RBP28.08■■■□□ 2.09
PTDSS2-201ENST00000308020 LAMC1P11047 1609 aa28.08■■■□□ 2.09
PTDSS2-201ENST00000308020 TMF1P82094 1093 aa28.06■■■□□ 2.08
PTDSS2-201ENST00000308020 ADGRL1O94910 1474 aa28.05■■■□□ 2.08
PTDSS2-201ENST00000308020 CC2D1BQ5T0F9 858 aaKnown RBP28.05■■■□□ 2.08
PTDSS2-201ENST00000308020 ATP7AQ04656 1500 aa28.05■■■□□ 2.08
PTDSS2-201ENST00000308020 RRP1P56182 461 aaKnown RBP28.04■■■□□ 2.08
PTDSS2-201ENST00000308020 PANK3Q9H999 370 aa28.04■■■□□ 2.08
PTDSS2-201ENST00000308020 ABCA9Q8IUA7 1624 aa28.04■■■□□ 2.08
PTDSS2-201ENST00000308020 ASXL2Q76L83 1435 aa28.04■■■□□ 2.08
PTDSS2-201ENST00000308020 KANK1Q14678 1352 aa28.02■■■□□ 2.08
PTDSS2-201ENST00000308020 RCAN3Q9UKA8 241 aa28.02■■■□□ 2.08
PTDSS2-201ENST00000308020 TRPM2O94759 1503 aa28.01■■■□□ 2.08
PTDSS2-201ENST00000308020 PTPRTO14522 1441 aa28■■■□□ 2.07
PTDSS2-201ENST00000308020 DEPDC5O75140 1603 aa27.99■■■□□ 2.07
PTDSS2-201ENST00000308020 INO80Q9ULG1 1556 aaPredicted RBP27.99■■■□□ 2.07
PTDSS2-201ENST00000308020 SPHKAPQ2M3C7 1700 aa27.98■■■□□ 2.07
PTDSS2-201ENST00000308020 EXOC6Q8TAG9 804 aa27.98■■■□□ 2.07
PTDSS2-201ENST00000308020 CLTCL1P53675 1640 aa27.97■■■□□ 2.07
PTDSS2-201ENST00000308020 MADDQ8WXG6 1647 aa27.96■■■□□ 2.07
PTDSS2-201ENST00000308020 CDCA7LQ96GN5 454 aa27.96■■■□□ 2.07
PTDSS2-201ENST00000308020 WASHC2CQ9Y4E1 1318 aa27.96■■■□□ 2.07
PTDSS2-201ENST00000308020 RNF17Q9BXT8 1623 aaKnown RBP27.96■■■□□ 2.07
PTDSS2-201ENST00000308020 PDE3BQ13370 1112 aa27.96■■■□□ 2.07
PTDSS2-201ENST00000308020 TET3O43151 1660 aa27.95■■■□□ 2.06
PTDSS2-201ENST00000308020 NOP58Q9Y2X3 529 aaKnown RBP27.94■■■□□ 2.06
PTDSS2-201ENST00000308020 CEP152O94986 1710 aa27.94■■■□□ 2.06
PTDSS2-201ENST00000308020 NPM1P06748 294 aaKnown RBP eCLIP27.93■■■□□ 2.06
PTDSS2-201ENST00000308020 PAK3O75914 559 aaPredicted RBP27.91■■■□□ 2.06
PTDSS2-201ENST00000308020 VWDEQ8N2E2 1590 aa27.9■■■□□ 2.06
PTDSS2-201ENST00000308020 OSCARQ8IYS5 282 aa27.9■■■□□ 2.06
PTDSS2-201ENST00000308020 STAC3Q96MF2 364 aa27.9■■■□□ 2.06
PTDSS2-201ENST00000308020 BCL11AQ9H165 835 aa27.88■■■□□ 2.05
PTDSS2-201ENST00000308020 ANP32AP39687 249 aaKnown RBP27.87■■■□□ 2.05
PTDSS2-201ENST00000308020 UGGT1Q9NYU2 1555 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms