RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 NBPF1Q3BBV0 1214 aa20.49■□□□□ 0.87
CSDC2-201ENST00000306149 CDC42BPBQ9Y5S2 1711 aa20.48■□□□□ 0.87
CSDC2-201ENST00000306149 SMG6Q86US8 1419 aaKnown RBP20.48■□□□□ 0.87
CSDC2-201ENST00000306149 NUDCQ9Y266 331 aa20.48■□□□□ 0.87
CSDC2-201ENST00000306149 FAM135AQ9P2D6 1515 aa20.47■□□□□ 0.87
CSDC2-201ENST00000306149 ARHGEF5Q12774 1597 aa20.47■□□□□ 0.87
CSDC2-201ENST00000306149 SYCP2Q9BX26 1530 aa20.44■□□□□ 0.86
CSDC2-201ENST00000306149 E9PCH4 1651 aa20.44■□□□□ 0.86
CSDC2-201ENST00000306149 SALL2Q9Y467 1007 aaPredicted RBP20.44■□□□□ 0.86
CSDC2-201ENST00000306149 CCDC144AA2RUR9 1427 aa20.44■□□□□ 0.86
CSDC2-201ENST00000306149 ARHGAP5Q13017 1502 aa20.42■□□□□ 0.86
CSDC2-201ENST00000306149 RSPH4AQ5TD94 716 aa20.42■□□□□ 0.86
CSDC2-201ENST00000306149 PREX2Q70Z35 1606 aa20.42■□□□□ 0.86
CSDC2-201ENST00000306149 TTC37Q6PGP7 1564 aa20.4■□□□□ 0.86
CSDC2-201ENST00000306149 MYBBP1AQ9BQG0 1328 aaKnown RBP20.4■□□□□ 0.86
CSDC2-201ENST00000306149 PLA2R1Q13018 1463 aa20.39■□□□□ 0.86
CSDC2-201ENST00000306149 PRAG1Q86YV5 1406 aa20.39■□□□□ 0.85
CSDC2-201ENST00000306149 PLEKHH2Q8IVE3 1493 aa20.38■□□□□ 0.85
CSDC2-201ENST00000306149 RALBP1Q15311 655 aa20.37■□□□□ 0.85
CSDC2-201ENST00000306149 ERCC6L2Q5T890 1561 aa20.37■□□□□ 0.85
CSDC2-201ENST00000306149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.37■□□□□ 0.85
CSDC2-201ENST00000306149 RNF123Q5XPI4 1314 aa20.37■□□□□ 0.85
CSDC2-201ENST00000306149 CHD1O14646 1710 aa20.37■□□□□ 0.85
CSDC2-201ENST00000306149 CCDC136Q96JN2 1154 aa20.35■□□□□ 0.85
CSDC2-201ENST00000306149 BRD4O60885 1362 aaPredicted RBP20.35■□□□□ 0.85
CSDC2-201ENST00000306149 CC2D1BQ5T0F9 858 aaKnown RBP20.34■□□□□ 0.85
CSDC2-201ENST00000306149 LRPPRCP42704 1394 aaKnown RBP20.34■□□□□ 0.85
CSDC2-201ENST00000306149 A2MP01023 1474 aa20.34■□□□□ 0.85
CSDC2-201ENST00000306149 KTN1Q86UP2 1357 aaKnown RBP20.33■□□□□ 0.84
CSDC2-201ENST00000306149 TRPM1Q7Z4N2 1603 aa20.32■□□□□ 0.84
CSDC2-201ENST00000306149 PER1O15534 1290 aaPredicted RBP20.31■□□□□ 0.84
CSDC2-201ENST00000306149 DISP3Q9P2K9 1392 aa20.31■□□□□ 0.84
CSDC2-201ENST00000306149 NLRP13Q86W25 1043 aa20.3■□□□□ 0.84
CSDC2-201ENST00000306149 TESK2Q96S53 571 aa20.3■□□□□ 0.84
CSDC2-201ENST00000306149 ERICH6Q7L0X2 663 aa20.29■□□□□ 0.84
CSDC2-201ENST00000306149 PANK3Q9H999 370 aa20.28■□□□□ 0.84
CSDC2-201ENST00000306149 UNC13BO14795 1591 aa20.27■□□□□ 0.84
CSDC2-201ENST00000306149 PARD3Q8TEW0 1356 aa20.27■□□□□ 0.83
CSDC2-201ENST00000306149 LAMC1P11047 1609 aa20.26■□□□□ 0.83
CSDC2-201ENST00000306149 MAST1Q9Y2H9 1570 aa20.25■□□□□ 0.83
CSDC2-201ENST00000306149 ABCC2Q92887 1545 aa20.25■□□□□ 0.83
CSDC2-201ENST00000306149 GPRASP1Q5JY77 1395 aa20.25■□□□□ 0.83
CSDC2-201ENST00000306149 CDCA7LQ96GN5 454 aa20.25■□□□□ 0.83
CSDC2-201ENST00000306149 MYO5CQ9NQX4 1742 aa20.25■□□□□ 0.83
CSDC2-201ENST00000306149 EFCAB2Q5VUJ9 269 aa20.24■□□□□ 0.83
CSDC2-201ENST00000306149 AFAP1Q8N556 730 aa20.23■□□□□ 0.83
CSDC2-201ENST00000306149 SHROOM2Q13796 1616 aa20.22■□□□□ 0.83
CSDC2-201ENST00000306149 TRAPPC8Q9Y2L5 1435 aa20.22■□□□□ 0.83
CSDC2-201ENST00000306149 IQGAP3Q86VI3 1631 aa20.22■□□□□ 0.83
CSDC2-201ENST00000306149 ERBINQ96RT1 1412 aa20.22■□□□□ 0.83
CSDC2-201ENST00000306149 EXOC6Q8TAG9 804 aa20.22■□□□□ 0.83
CSDC2-201ENST00000306149 COL17A1Q9UMD9 1497 aaPredicted RBP20.22■□□□□ 0.83
CSDC2-201ENST00000306149 RRP1P56182 461 aaKnown RBP20.21■□□□□ 0.83
CSDC2-201ENST00000306149 TMF1P82094 1093 aa20.21■□□□□ 0.83
CSDC2-201ENST00000306149 RCAN3Q9UKA8 241 aa20.21■□□□□ 0.83
CSDC2-201ENST00000306149 DUOX2Q9NRD8 1548 aa20.21■□□□□ 0.83
CSDC2-201ENST00000306149 PLXNC1O60486 1568 aa20.2■□□□□ 0.82
CSDC2-201ENST00000306149 PLCH2O75038 1416 aa20.2■□□□□ 0.82
CSDC2-201ENST00000306149 PRDM15P57071 1507 aaPredicted RBP20.19■□□□□ 0.82
CSDC2-201ENST00000306149 EIF2AK4Q9P2K8 1649 aaKnown RBP20.17■□□□□ 0.82
CSDC2-201ENST00000306149 SPAG9O60271 1321 aaKnown RBP20.16■□□□□ 0.82
CSDC2-201ENST00000306149 MYT1LQ9UL68 1186 aa20.15■□□□□ 0.82
CSDC2-201ENST00000306149 PLIN1O60240 522 aa20.15■□□□□ 0.82
CSDC2-201ENST00000306149 ZCCHC11Q5TAX3 1644 aaKnown RBP20.14■□□□□ 0.81
CSDC2-201ENST00000306149 ATP10AO60312 1499 aa20.13■□□□□ 0.81
CSDC2-201ENST00000306149 MAGI2Q86UL8 1455 aa20.13■□□□□ 0.81
CSDC2-201ENST00000306149 ZMYM4Q5VZL5 1548 aa20.13■□□□□ 0.81
CSDC2-201ENST00000306149 WASHC2CQ9Y4E1 1318 aa20.12■□□□□ 0.81
CSDC2-201ENST00000306149 PAK3O75914 559 aaPredicted RBP20.11■□□□□ 0.81
CSDC2-201ENST00000306149 PDE3BQ13370 1112 aa20.11■□□□□ 0.81
CSDC2-201ENST00000306149 RNF17Q9BXT8 1623 aaKnown RBP20.11■□□□□ 0.81
CSDC2-201ENST00000306149 ADAMTS8Q9UP79 889 aa20.11■□□□□ 0.81
CSDC2-201ENST00000306149 ABCC1P33527 1531 aa20.11■□□□□ 0.81
CSDC2-201ENST00000306149 NOP58Q9Y2X3 529 aaKnown RBP20.1■□□□□ 0.81
CSDC2-201ENST00000306149 INSRP06213 1382 aa20.09■□□□□ 0.81
CSDC2-201ENST00000306149 KNSTRNQ9Y448 316 aa20.09■□□□□ 0.81
CSDC2-201ENST00000306149 KIF3BO15066 747 aa20.06■□□□□ 0.8
CSDC2-201ENST00000306149 WDR7Q9Y4E6 1490 aa20.05■□□□□ 0.8
CSDC2-201ENST00000306149 PPP2R1AP30153 589 aa20.05■□□□□ 0.8
CSDC2-201ENST00000306149 BLMP54132 1417 aaPredicted RBP20.05■□□□□ 0.8
CSDC2-201ENST00000306149 SKAP1Q86WV1 359 aa20.03■□□□□ 0.8
CSDC2-201ENST00000306149 ANP32AP39687 249 aaKnown RBP20.02■□□□□ 0.8
CSDC2-201ENST00000306149 AMER1Q5JTC6 1135 aaPredicted RBP20.02■□□□□ 0.8
CSDC2-201ENST00000306149 MADDQ8WXG6 1647 aa20.02■□□□□ 0.8
CSDC2-201ENST00000306149 NBR1Q14596 966 aa20.01■□□□□ 0.79
CSDC2-201ENST00000306149 NPM2Q86SE8 214 aaKnown RBP20.01■□□□□ 0.79
CSDC2-201ENST00000306149 CRBNQ96SW2 442 aa20.01■□□□□ 0.79
CSDC2-201ENST00000306149 UHRF1BP1LA0JNW5 1464 aa20.01■□□□□ 0.79
CSDC2-201ENST00000306149 WDR43Q15061 677 aaKnown RBP eCLIP20■□□□□ 0.79
CSDC2-201ENST00000306149 ZFYVE16Q7Z3T8 1539 aa20■□□□□ 0.79
CSDC2-201ENST00000306149 CFAP70Q5T0N1 1121 aa20■□□□□ 0.79
CSDC2-201ENST00000306149 IQGAP1P46940 1657 aa19.99■□□□□ 0.79
CSDC2-201ENST00000306149 CLTCL1P53675 1640 aa19.99■□□□□ 0.79
CSDC2-201ENST00000306149 C20orf194Q5TEA3 1177 aa19.99■□□□□ 0.79
CSDC2-201ENST00000306149 IPO9Q96P70 1041 aaKnown RBP19.99■□□□□ 0.79
CSDC2-201ENST00000306149 CLASP1Q7Z460 1538 aa19.99■□□□□ 0.79
CSDC2-201ENST00000306149 SCAPERQ9BY12 1400 aa19.99■□□□□ 0.79
CSDC2-201ENST00000306149 TRPM2O94759 1503 aa19.98■□□□□ 0.79
CSDC2-201ENST00000306149 SCAF11Q99590 1463 aaKnown RBP19.98■□□□□ 0.79
CSDC2-201ENST00000306149 RTEL1-TNFRSF6BF6WH68 1400 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 881.3 ms