RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 CDCA8Q53HL2 280 aa16.64■□□□□ 0.25
TRIM35-201ENST00000305364 KIAA1107Q9UPP5 1409 aa16.64■□□□□ 0.25
TRIM35-201ENST00000305364 APAF1O14727 1248 aa16.62■□□□□ 0.25
TRIM35-201ENST00000305364 TNNT2P45379 298 aaPredicted RBP16.62■□□□□ 0.25
TRIM35-201ENST00000305364 MYH16Q9H6N6 1097 aa16.62■□□□□ 0.25
TRIM35-201ENST00000305364 POLA1P09884 1462 aaPredicted RBP16.62■□□□□ 0.25
TRIM35-201ENST00000305364 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
TRIM35-201ENST00000305364 CHGAP10645 457 aaKnown RBP16.62■□□□□ 0.25
TRIM35-201ENST00000305364 CLUAP1Q96AJ1 413 aa16.62■□□□□ 0.25
TRIM35-201ENST00000305364 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
TRIM35-201ENST00000305364 NBPF1Q3BBV0 1214 aa16.61■□□□□ 0.25
TRIM35-201ENST00000305364 FTSJ3Q8IY81 847 aaKnown RBP16.61■□□□□ 0.25
TRIM35-201ENST00000305364 HSCBQ8IWL3 235 aa16.61■□□□□ 0.25
TRIM35-201ENST00000305364 ESF1Q9H501 851 aaKnown RBP16.61■□□□□ 0.25
TRIM35-201ENST00000305364 MFAP1P55081 439 aaKnown RBP16.6■□□□□ 0.25
TRIM35-201ENST00000305364 PKNOX2Q96KN3 472 aa16.6■□□□□ 0.25
TRIM35-201ENST00000305364 SNAPC4Q5SXM2 1469 aa16.6■□□□□ 0.25
TRIM35-201ENST00000305364 CDK13Q14004 1512 aaKnown RBP16.59■□□□□ 0.25
TRIM35-201ENST00000305364 CENPJQ9HC77 1338 aaPredicted RBP16.59■□□□□ 0.25
TRIM35-201ENST00000305364 SPATA31E1Q6ZUB1 1445 aa16.59■□□□□ 0.25
TRIM35-201ENST00000305364 ROCK1Q13464 1354 aa16.58■□□□□ 0.25
TRIM35-201ENST00000305364 BCAR3O75815 825 aa16.58■□□□□ 0.25
TRIM35-201ENST00000305364 HNRNPMP52272 730 aaKnown RBP eCLIP16.58■□□□□ 0.25
TRIM35-201ENST00000305364 C8orf34Q49A92 452 aa16.58■□□□□ 0.24
TRIM35-201ENST00000305364 ANKRD50Q9ULJ7 1429 aa16.58■□□□□ 0.24
TRIM35-201ENST00000305364 CGNL1Q0VF96 1302 aa16.58■□□□□ 0.24
TRIM35-201ENST00000305364 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
TRIM35-201ENST00000305364 UGGT2Q9NYU1 1516 aa16.57■□□□□ 0.24
TRIM35-201ENST00000305364 ABCC5O15440 1437 aa16.57■□□□□ 0.24
TRIM35-201ENST00000305364 PMFBP1Q8TBY8 1022 aa16.57■□□□□ 0.24
TRIM35-201ENST00000305364 LRPPRCP42704 1394 aaKnown RBP16.57■□□□□ 0.24
TRIM35-201ENST00000305364 HSP90AB1P08238 724 aaKnown RBP16.57■□□□□ 0.24
TRIM35-201ENST00000305364 PANK1Q8TE04 598 aa16.57■□□□□ 0.24
TRIM35-201ENST00000305364 NCLP19338 710 aaKnown RBP16.56■□□□□ 0.24
TRIM35-201ENST00000305364 BCL2L13Q9BXK5 485 aa16.56■□□□□ 0.24
TRIM35-201ENST00000305364 EPRSP07814 1512 aaKnown RBP16.56■□□□□ 0.24
TRIM35-201ENST00000305364 ABCA10Q8WWZ4 1543 aa16.56■□□□□ 0.24
TRIM35-201ENST00000305364 GRIN2BQ13224 1484 aa16.55■□□□□ 0.24
TRIM35-201ENST00000305364 KDM5BQ9UGL1 1544 aa16.55■□□□□ 0.24
TRIM35-201ENST00000305364 GOLGA6L22H0YM25 854 aa16.55■□□□□ 0.24
TRIM35-201ENST00000305364 RWDD1Q9H446 243 aaPredicted RBP16.55■□□□□ 0.24
TRIM35-201ENST00000305364 DNAJC5BQ9UF47 199 aa16.55■□□□□ 0.24
TRIM35-201ENST00000305364 TEX14Q8IWB6 1497 aa16.55■□□□□ 0.24
TRIM35-201ENST00000305364 HECW1Q76N89 1606 aa16.55■□□□□ 0.24
TRIM35-201ENST00000305364 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
TRIM35-201ENST00000305364 CCDC144AA2RUR9 1427 aa16.54■□□□□ 0.24
TRIM35-201ENST00000305364 E9PSI1 815 aa16.54■□□□□ 0.24
TRIM35-201ENST00000305364 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
TRIM35-201ENST00000305364 RRP7AQ9Y3A4 280 aaKnown RBP16.52■□□□□ 0.24
TRIM35-201ENST00000305364 PPP2R1AP30153 589 aa16.52■□□□□ 0.24
TRIM35-201ENST00000305364 DUSP27Q5VZP5 1158 aa16.51■□□□□ 0.23
TRIM35-201ENST00000305364 KDM6BO15054 1643 aa16.5■□□□□ 0.23
TRIM35-201ENST00000305364 CHMP5Q9NZZ3 219 aa16.5■□□□□ 0.23
TRIM35-201ENST00000305364 TRAK2O60296 914 aa16.5■□□□□ 0.23
TRIM35-201ENST00000305364 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
TRIM35-201ENST00000305364 MSNP26038 577 aaKnown RBP16.49■□□□□ 0.23
TRIM35-201ENST00000305364 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
TRIM35-201ENST00000305364 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
TRIM35-201ENST00000305364 GBP4Q96PP9 640 aa16.48■□□□□ 0.23
TRIM35-201ENST00000305364 CUL7Q14999 1698 aa16.48■□□□□ 0.23
TRIM35-201ENST00000305364 DDX11L8A8MPP1 907 aa16.47■□□□□ 0.23
TRIM35-201ENST00000305364 MRE11P49959 708 aa16.47■□□□□ 0.23
TRIM35-201ENST00000305364 RRAGDQ9NQL2 400 aaPredicted RBP16.47■□□□□ 0.23
TRIM35-201ENST00000305364 SLFN5Q08AF3 891 aa16.46■□□□□ 0.23
TRIM35-201ENST00000305364 ARID3AQ99856 593 aa16.46■□□□□ 0.23
TRIM35-201ENST00000305364 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.23
TRIM35-201ENST00000305364 EIF3AQ14152 1382 aaKnown RBP16.46■□□□□ 0.23
TRIM35-201ENST00000305364 KDM2BQ8NHM5 1336 aa16.46■□□□□ 0.23
TRIM35-201ENST00000305364 PRDM2Q13029 1718 aa16.46■□□□□ 0.23
TRIM35-201ENST00000305364 PARD3Q8TEW0 1356 aa16.46■□□□□ 0.23
TRIM35-201ENST00000305364 NESP48681 1621 aa16.46■□□□□ 0.22
TRIM35-201ENST00000305364 IGHDP01880 384 aa16.46■□□□□ 0.22
TRIM35-201ENST00000305364 MCM4P33991 863 aa16.46■□□□□ 0.22
TRIM35-201ENST00000305364 CFAP53Q96M91 514 aa16.46■□□□□ 0.22
TRIM35-201ENST00000305364 DENND4BO75064 1496 aaPredicted RBP16.45■□□□□ 0.22
TRIM35-201ENST00000305364 MORC1Q86VD1 984 aa16.45■□□□□ 0.22
TRIM35-201ENST00000305364 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
TRIM35-201ENST00000305364 C22orf23Q9BZE7 217 aa16.44■□□□□ 0.22
TRIM35-201ENST00000305364 PRG4Q92954 1404 aaPredicted RBP16.44■□□□□ 0.22
TRIM35-201ENST00000305364 PDZRN3Q9UPQ7 1066 aa16.44■□□□□ 0.22
TRIM35-201ENST00000305364 SEC24BO95487 1268 aa16.43■□□□□ 0.22
TRIM35-201ENST00000305364 ITPRIPQ8IWB1 547 aa16.43■□□□□ 0.22
TRIM35-201ENST00000305364 PDE3AQ14432 1141 aa16.43■□□□□ 0.22
TRIM35-201ENST00000305364 PANK2Q9BZ23 570 aa16.43■□□□□ 0.22
TRIM35-201ENST00000305364 CTTNBP2Q8WZ74 1663 aa16.43■□□□□ 0.22
TRIM35-201ENST00000305364 XRCC6P12956 609 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRIM35-201ENST00000305364 TBC1D2Q9BYX2 928 aa16.42■□□□□ 0.22
TRIM35-201ENST00000305364 THOC2Q8NI27 1593 aaKnown RBP16.42■□□□□ 0.22
TRIM35-201ENST00000305364 RALGAPBQ86X10 1494 aa16.41■□□□□ 0.22
TRIM35-201ENST00000305364 PER1O15534 1290 aaPredicted RBP16.41■□□□□ 0.22
TRIM35-201ENST00000305364 GCC2Q8IWJ2 1684 aa16.41■□□□□ 0.22
TRIM35-201ENST00000305364 MAGI3Q5TCQ9 1506 aa16.4■□□□□ 0.22
TRIM35-201ENST00000305364 ESPNB1AK53 854 aa16.4■□□□□ 0.22
TRIM35-201ENST00000305364 RRP9O43818 475 aaKnown RBP16.4■□□□□ 0.22
TRIM35-201ENST00000305364 GRPEL1Q9HAV7 217 aa16.4■□□□□ 0.22
TRIM35-201ENST00000305364 PLEKHH2Q8IVE3 1493 aa16.39■□□□□ 0.22
TRIM35-201ENST00000305364 ZMYND15Q9H091 742 aa16.39■□□□□ 0.21
TRIM35-201ENST00000305364 SMC4Q9NTJ3 1288 aa16.39■□□□□ 0.21
TRIM35-201ENST00000305364 ERBINQ96RT1 1412 aa16.39■□□□□ 0.21
TRIM35-201ENST00000305364 U2SURPO15042 1029 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms