RNA–Protein interactions for RNA: ENST00000302424.11

TRIM8-201, Transcript of tripartite motif containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM8, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-201ENST00000302424 ERICH6Q7L0X2 663 aa24.25■■□□□ 1.47
TRIM8-201ENST00000302424 SAMD9LQ8IVG5 1584 aa24.25■■□□□ 1.47
TRIM8-201ENST00000302424 ERICH6BQ5W0A0 696 aa24.25■■□□□ 1.47
TRIM8-201ENST00000302424 SMG6Q86US8 1419 aaKnown RBP24.24■■□□□ 1.47
TRIM8-201ENST00000302424 CCDC144AA2RUR9 1427 aa24.24■■□□□ 1.47
TRIM8-201ENST00000302424 SYCP2Q9BX26 1530 aa24.23■■□□□ 1.47
TRIM8-201ENST00000302424 FAM135AQ9P2D6 1515 aa24.23■■□□□ 1.47
TRIM8-201ENST00000302424 CCDC141Q6ZP82 1450 aa24.22■■□□□ 1.47
TRIM8-201ENST00000302424 SHANK2Q9UPX8 1470 aa24.22■■□□□ 1.47
TRIM8-201ENST00000302424 CDC42BPBQ9Y5S2 1711 aa24.21■■□□□ 1.47
TRIM8-201ENST00000302424 ARHGAP5Q13017 1502 aa24.21■■□□□ 1.47
TRIM8-201ENST00000302424 MYBBP1AQ9BQG0 1328 aaKnown RBP24.2■■□□□ 1.47
TRIM8-201ENST00000302424 PLEKHH2Q8IVE3 1493 aa24.2■■□□□ 1.46
TRIM8-201ENST00000302424 CDCA7LQ96GN5 454 aa24.19■■□□□ 1.46
TRIM8-201ENST00000302424 FANCIQ9NVI1 1328 aa24.19■■□□□ 1.46
TRIM8-201ENST00000302424 ARID4BQ4LE39 1312 aaPredicted RBP24.19■■□□□ 1.46
TRIM8-201ENST00000302424 ERCC6L2Q5T890 1561 aa24.18■■□□□ 1.46
TRIM8-201ENST00000302424 PLA2R1Q13018 1463 aa24.16■■□□□ 1.46
TRIM8-201ENST00000302424 DISP3Q9P2K9 1392 aa24.16■■□□□ 1.46
TRIM8-201ENST00000302424 PANK3Q9H999 370 aa24.16■■□□□ 1.46
TRIM8-201ENST00000302424 TTC37Q6PGP7 1564 aa24.15■■□□□ 1.46
TRIM8-201ENST00000302424 PRAG1Q86YV5 1406 aa24.14■■□□□ 1.46
TRIM8-201ENST00000302424 RALBP1Q15311 655 aa24.13■■□□□ 1.45
TRIM8-201ENST00000302424 ARHGEF12Q9NZN5 1544 aa24.13■■□□□ 1.45
TRIM8-201ENST00000302424 EXOC6Q8TAG9 804 aa24.13■■□□□ 1.45
TRIM8-201ENST00000302424 KDM5DQ9BY66 1539 aa24.12■■□□□ 1.45
TRIM8-201ENST00000302424 PLIN1O60240 522 aa24.12■■□□□ 1.45
TRIM8-201ENST00000302424 PER1O15534 1290 aaPredicted RBP24.11■■□□□ 1.45
TRIM8-201ENST00000302424 A2MP01023 1474 aa24.1■■□□□ 1.45
TRIM8-201ENST00000302424 AFAP1Q8N556 730 aa24.1■■□□□ 1.45
TRIM8-201ENST00000302424 TESK2Q96S53 571 aa24.1■■□□□ 1.45
TRIM8-201ENST00000302424 KTN1Q86UP2 1357 aaKnown RBP24.1■■□□□ 1.45
TRIM8-201ENST00000302424 ARHGEF5Q12774 1597 aa24.09■■□□□ 1.45
TRIM8-201ENST00000302424 MYT1LQ9UL68 1186 aa24.09■■□□□ 1.45
TRIM8-201ENST00000302424 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.09■■□□□ 1.45
TRIM8-201ENST00000302424 BRD4O60885 1362 aaPredicted RBP24.08■■□□□ 1.45
TRIM8-201ENST00000302424 NLRP13Q86W25 1043 aa24.08■■□□□ 1.45
TRIM8-201ENST00000302424 SKAP1Q86WV1 359 aa24.08■■□□□ 1.45
TRIM8-201ENST00000302424 LRPPRCP42704 1394 aaKnown RBP24.08■■□□□ 1.44
TRIM8-201ENST00000302424 PREX2Q70Z35 1606 aa24.08■■□□□ 1.44
TRIM8-201ENST00000302424 RSPH4AQ5TD94 716 aa24.07■■□□□ 1.44
TRIM8-201ENST00000302424 PAK3O75914 559 aaPredicted RBP24.07■■□□□ 1.44
TRIM8-201ENST00000302424 RNF123Q5XPI4 1314 aa24.07■■□□□ 1.44
TRIM8-201ENST00000302424 CHD1O14646 1710 aa24.07■■□□□ 1.44
TRIM8-201ENST00000302424 RCAN3Q9UKA8 241 aa24.06■■□□□ 1.44
TRIM8-201ENST00000302424 RRP1P56182 461 aaKnown RBP24.04■■□□□ 1.44
TRIM8-201ENST00000302424 NBR1Q14596 966 aa24.03■■□□□ 1.44
TRIM8-201ENST00000302424 TRPM1Q7Z4N2 1603 aa24.02■■□□□ 1.44
TRIM8-201ENST00000302424 NPM2Q86SE8 214 aaKnown RBP24.01■■□□□ 1.43
TRIM8-201ENST00000302424 PARD3Q8TEW0 1356 aa24.01■■□□□ 1.43
TRIM8-201ENST00000302424 TMF1P82094 1093 aa23.99■■□□□ 1.43
TRIM8-201ENST00000302424 TRAPPC8Q9Y2L5 1435 aa23.99■■□□□ 1.43
TRIM8-201ENST00000302424 EFCAB2Q5VUJ9 269 aa23.98■■□□□ 1.43
TRIM8-201ENST00000302424 ERBINQ96RT1 1412 aa23.97■■□□□ 1.43
TRIM8-201ENST00000302424 ADAMTS8Q9UP79 889 aa23.96■■□□□ 1.43
TRIM8-201ENST00000302424 E9PCH4 1651 aa23.94■■□□□ 1.42
TRIM8-201ENST00000302424 SPAG9O60271 1321 aaKnown RBP23.92■■□□□ 1.42
TRIM8-201ENST00000302424 NOP58Q9Y2X3 529 aaKnown RBP23.92■■□□□ 1.42
TRIM8-201ENST00000302424 COL17A1Q9UMD9 1497 aaPredicted RBP23.92■■□□□ 1.42
TRIM8-201ENST00000302424 MYO5CQ9NQX4 1742 aa23.91■■□□□ 1.42
TRIM8-201ENST00000302424 C20orf194Q5TEA3 1177 aa23.9■■□□□ 1.42
TRIM8-201ENST00000302424 GPRASP1Q5JY77 1395 aa23.9■■□□□ 1.42
TRIM8-201ENST00000302424 KNSTRNQ9Y448 316 aa23.89■■□□□ 1.41
TRIM8-201ENST00000302424 ABCC2Q92887 1545 aa23.89■■□□□ 1.41
TRIM8-201ENST00000302424 UNC13BO14795 1591 aa23.88■■□□□ 1.41
TRIM8-201ENST00000302424 CCDC146Q8IYE0 955 aa23.88■■□□□ 1.41
TRIM8-201ENST00000302424 KIF3BO15066 747 aa23.87■■□□□ 1.41
TRIM8-201ENST00000302424 BCL11AQ9H165 835 aa23.87■■□□□ 1.41
TRIM8-201ENST00000302424 CRBNQ96SW2 442 aa23.87■■□□□ 1.41
TRIM8-201ENST00000302424 PLCH2O75038 1416 aa23.86■■□□□ 1.41
TRIM8-201ENST00000302424 PRDM15P57071 1507 aaPredicted RBP23.85■■□□□ 1.41
TRIM8-201ENST00000302424 DUOX2Q9NRD8 1548 aa23.84■■□□□ 1.41
TRIM8-201ENST00000302424 ANP32AP39687 249 aaKnown RBP23.84■■□□□ 1.41
TRIM8-201ENST00000302424 IQGAP3Q86VI3 1631 aa23.84■■□□□ 1.41
TRIM8-201ENST00000302424 MAGI2Q86UL8 1455 aa23.84■■□□□ 1.41
TRIM8-201ENST00000302424 PPP2R1AP30153 589 aa23.83■■□□□ 1.41
TRIM8-201ENST00000302424 CFAP70Q5T0N1 1121 aa23.82■■□□□ 1.4
TRIM8-201ENST00000302424 CHGAP10645 457 aaKnown RBP23.81■■□□□ 1.4
TRIM8-201ENST00000302424 WDR43Q15061 677 aaKnown RBP eCLIP23.81■■□□□ 1.4
TRIM8-201ENST00000302424 MAST1Q9Y2H9 1570 aa23.8■■□□□ 1.4
TRIM8-201ENST00000302424 ZCCHC11Q5TAX3 1644 aaKnown RBP23.79■■□□□ 1.4
TRIM8-201ENST00000302424 PDE3BQ13370 1112 aa23.78■■□□□ 1.4
TRIM8-201ENST00000302424 IPO9Q96P70 1041 aaKnown RBP23.78■■□□□ 1.4
TRIM8-201ENST00000302424 PLXNC1O60486 1568 aa23.78■■□□□ 1.4
TRIM8-201ENST00000302424 AMER1Q5JTC6 1135 aaPredicted RBP23.78■■□□□ 1.4
TRIM8-201ENST00000302424 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
TRIM8-201ENST00000302424 PLEKHH1Q9ULM0 1364 aa23.76■■□□□ 1.39
TRIM8-201ENST00000302424 ZBTB47Q9UFB7 747 aaPredicted RBP23.76■■□□□ 1.39
TRIM8-201ENST00000302424 PDE4AP27815 886 aa23.75■■□□□ 1.39
TRIM8-201ENST00000302424 TNNT2P45379 298 aaPredicted RBP23.75■■□□□ 1.39
TRIM8-201ENST00000302424 WDR7Q9Y4E6 1490 aa23.75■■□□□ 1.39
TRIM8-201ENST00000302424 SCAPERQ9BY12 1400 aa23.75■■□□□ 1.39
TRIM8-201ENST00000302424 ADGRF5Q8IZF2 1346 aa23.74■■□□□ 1.39
TRIM8-201ENST00000302424 UGGT1Q9NYU2 1555 aa23.74■■□□□ 1.39
TRIM8-201ENST00000302424 ATP10AO60312 1499 aa23.74■■□□□ 1.39
TRIM8-201ENST00000302424 ABCC1P33527 1531 aa23.73■■□□□ 1.39
TRIM8-201ENST00000302424 WASHC2CQ9Y4E1 1318 aa23.73■■□□□ 1.39
TRIM8-201ENST00000302424 SPINK5Q9NQ38 1064 aaPredicted RBP23.72■■□□□ 1.39
TRIM8-201ENST00000302424 NUTM2DQ5VT03 806 aaPredicted RBP23.71■■□□□ 1.39
TRIM8-201ENST00000302424 BLMP54132 1417 aaPredicted RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms