RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 FGD5Q6ZNL6 1462 aa9.83□□□□□ -0.84
LRRC28-201ENST00000301981 BCAR3O75815 825 aa9.83□□□□□ -0.84
LRRC28-201ENST00000301981 BCL11BQ9C0K0 894 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-201ENST00000301981 SMC4Q9NTJ3 1288 aa9.82□□□□□ -0.84
LRRC28-201ENST00000301981 KIF15Q9NS87 1388 aa9.82□□□□□ -0.84
LRRC28-201ENST00000301981 FAM161AQ3B820 660 aa9.81□□□□□ -0.84
LRRC28-201ENST00000301981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.81□□□□□ -0.84
LRRC28-201ENST00000301981 CENPJQ9HC77 1338 aaPredicted RBP9.81□□□□□ -0.84
LRRC28-201ENST00000301981 CADPSQ9ULU8 1353 aa9.8□□□□□ -0.84
LRRC28-201ENST00000301981 GOLGA6L22H0YM25 854 aa9.8□□□□□ -0.84
LRRC28-201ENST00000301981 CDCA8Q53HL2 280 aa9.8□□□□□ -0.84
LRRC28-201ENST00000301981 PKNOX2Q96KN3 472 aa9.8□□□□□ -0.84
LRRC28-201ENST00000301981 UACAQ9BZF9 1416 aa9.8□□□□□ -0.84
LRRC28-201ENST00000301981 VSIG10Q8N0Z9 540 aa9.79□□□□□ -0.84
LRRC28-201ENST00000301981 GOLGA6L3A6NEY3 463 aa9.79□□□□□ -0.84
LRRC28-201ENST00000301981 KIF3BO15066 747 aa9.79□□□□□ -0.84
LRRC28-201ENST00000301981 CYB5RLQ6IPT4 315 aa9.79□□□□□ -0.84
LRRC28-201ENST00000301981 ZNF428Q96B54 188 aa9.79□□□□□ -0.84
LRRC28-201ENST00000301981 PNNQ9H307 717 aaKnown RBP9.79□□□□□ -0.84
LRRC28-201ENST00000301981 ANKRD30AQ9BXX3 1397 aa9.79□□□□□ -0.84
LRRC28-201ENST00000301981 NCOA2Q15596 1464 aa9.78□□□□□ -0.84
LRRC28-201ENST00000301981 PNISRQ8TF01 805 aaKnown RBP9.78□□□□□ -0.84
LRRC28-201ENST00000301981 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-201ENST00000301981 LMOD2Q6P5Q4 547 aa9.77□□□□□ -0.85
LRRC28-201ENST00000301981 DNAJC5BQ9UF47 199 aa9.77□□□□□ -0.85
LRRC28-201ENST00000301981 CENPQQ7L2Z9 268 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-201ENST00000301981 MPNDQ8N594 471 aa9.76□□□□□ -0.85
LRRC28-201ENST00000301981 MYOM3Q5VTT5 1437 aa9.76□□□□□ -0.85
LRRC28-201ENST00000301981 FANCD2Q9BXW9 1451 aa9.76□□□□□ -0.85
LRRC28-201ENST00000301981 SLC4A10Q6U841 1118 aa9.75□□□□□ -0.85
LRRC28-201ENST00000301981 RWDD1Q9H446 243 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-201ENST00000301981 TMEM132EQ6IEE7 984 aa9.75□□□□□ -0.85
LRRC28-201ENST00000301981 NAP1L2Q9ULW6 460 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-201ENST00000301981 CUX1P39880 1505 aa9.75□□□□□ -0.85
LRRC28-201ENST00000301981 NECTIN2Q92692 538 aa9.75□□□□□ -0.85
LRRC28-201ENST00000301981 AQRO60306 1485 aaKnown RBP eCLIP9.75□□□□□ -0.85
LRRC28-201ENST00000301981 NESP48681 1621 aa9.75□□□□□ -0.85
LRRC28-201ENST00000301981 L1TD1Q5T7N2 865 aaKnown RBP9.75□□□□□ -0.85
LRRC28-201ENST00000301981 ANKRD45Q5TZF3 282 aa9.75□□□□□ -0.85
LRRC28-201ENST00000301981 BACH2Q9BYV9 841 aa9.75□□□□□ -0.85
LRRC28-201ENST00000301981 C1orf115Q9H7X2 142 aa9.74□□□□□ -0.85
LRRC28-201ENST00000301981 PRXQ9BXM0 1461 aa9.74□□□□□ -0.85
LRRC28-201ENST00000301981 MSNP26038 577 aaKnown RBP9.74□□□□□ -0.85
LRRC28-201ENST00000301981 LNPKQ9C0E8 428 aa9.73□□□□□ -0.85
LRRC28-201ENST00000301981 JPH4Q96JJ6 628 aa9.73□□□□□ -0.85
LRRC28-201ENST00000301981 PODXL2Q9NZ53 605 aa9.73□□□□□ -0.85
LRRC28-201ENST00000301981 MAPKBP1O60336 1514 aa9.72□□□□□ -0.85
LRRC28-201ENST00000301981 TSR2Q969E8 191 aaKnown RBP9.72□□□□□ -0.85
LRRC28-201ENST00000301981 CCDC144AA2RUR9 1427 aa9.72□□□□□ -0.85
LRRC28-201ENST00000301981 PDE3BQ13370 1112 aa9.72□□□□□ -0.85
LRRC28-201ENST00000301981 OS9Q13438 667 aaPredicted RBP9.71□□□□□ -0.85
LRRC28-201ENST00000301981 CCDC9Q9Y3X0 531 aaKnown RBP9.71□□□□□ -0.85
LRRC28-201ENST00000301981 TIAM1Q13009 1591 aa9.71□□□□□ -0.86
LRRC28-201ENST00000301981 PRDM2Q13029 1718 aa9.71□□□□□ -0.86
LRRC28-201ENST00000301981 HMOX1P09601 288 aa9.7□□□□□ -0.86
LRRC28-201ENST00000301981 CASC1Q6TDU7 716 aa9.7□□□□□ -0.86
LRRC28-201ENST00000301981 PMFBP1Q8TBY8 1022 aa9.7□□□□□ -0.86
LRRC28-201ENST00000301981 UBE2Q2Q8WVN8 375 aa9.7□□□□□ -0.86
LRRC28-201ENST00000301981 MINK1Q8N4C8 1332 aaPredicted RBP9.7□□□□□ -0.86
LRRC28-201ENST00000301981 PTPRKQ15262 1439 aa9.69□□□□□ -0.86
LRRC28-201ENST00000301981 A0A0U1RQG5 324 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-201ENST00000301981 TRIM6-TRIM34B2RNG4 842 aa9.69□□□□□ -0.86
LRRC28-201ENST00000301981 PPP2R1AP30153 589 aa9.69□□□□□ -0.86
LRRC28-201ENST00000301981 LTV1Q96GA3 475 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-201ENST00000301981 GGNBP2Q9H3C7 697 aa9.69□□□□□ -0.86
LRRC28-201ENST00000301981 NAIPQ13075 1403 aa9.69□□□□□ -0.86
LRRC28-201ENST00000301981 CHMP3Q9Y3E7 222 aa9.69□□□□□ -0.86
LRRC28-201ENST00000301981 CFAP70Q5T0N1 1121 aa9.68□□□□□ -0.86
LRRC28-201ENST00000301981 CDK13Q14004 1512 aaKnown RBP9.68□□□□□ -0.86
LRRC28-201ENST00000301981 KCNJ4P48050 445 aa9.68□□□□□ -0.86
LRRC28-201ENST00000301981 USP35Q9P2H5 1018 aa9.68□□□□□ -0.86
LRRC28-201ENST00000301981 HSP90AA2PQ14568 343 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-201ENST00000301981 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
LRRC28-201ENST00000301981 MS4A1P11836 297 aa9.67□□□□□ -0.86
LRRC28-201ENST00000301981 PDZRN3Q9UPQ7 1066 aa9.67□□□□□ -0.86
LRRC28-201ENST00000301981 CASKIN1Q8WXD9 1431 aa9.67□□□□□ -0.86
LRRC28-201ENST00000301981 PCF11O94913 1555 aaKnown RBP9.67□□□□□ -0.86
LRRC28-201ENST00000301981 DDX49Q9Y6V7 483 aaKnown RBP9.67□□□□□ -0.86
LRRC28-201ENST00000301981 PRG4Q92954 1404 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-201ENST00000301981 HAP1P54257 671 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-201ENST00000301981 E9PSI1 815 aa9.66□□□□□ -0.86
LRRC28-201ENST00000301981 RBM10P98175 930 aaKnown RBP9.66□□□□□ -0.86
LRRC28-201ENST00000301981 GBP4Q96PP9 640 aa9.66□□□□□ -0.86
LRRC28-201ENST00000301981 DRC7Q8IY82 874 aa9.66□□□□□ -0.86
LRRC28-201ENST00000301981 SMG6Q86US8 1419 aaKnown RBP9.66□□□□□ -0.86
LRRC28-201ENST00000301981 GAPVD1Q14C86 1478 aa9.65□□□□□ -0.86
LRRC28-201ENST00000301981 RILPL2Q969X0 211 aa9.65□□□□□ -0.86
LRRC28-201ENST00000301981 SLC12A5Q9H2X9 1139 aa9.65□□□□□ -0.86
LRRC28-201ENST00000301981 FAM13BQ9NYF5 915 aa9.65□□□□□ -0.86
LRRC28-201ENST00000301981 RNF214Q8ND24 703 aa9.65□□□□□ -0.86
LRRC28-201ENST00000301981 TOP2BQ02880 1626 aa9.65□□□□□ -0.86
LRRC28-201ENST00000301981 MTHFSP49914 203 aa9.65□□□□□ -0.87
LRRC28-201ENST00000301981 AFAP1Q8N556 730 aa9.65□□□□□ -0.87
LRRC28-201ENST00000301981 C22orf23Q9BZE7 217 aa9.65□□□□□ -0.87
LRRC28-201ENST00000301981 RIPK4P57078 832 aa9.64□□□□□ -0.87
LRRC28-201ENST00000301981 ZKSCAN2Q63HK3 967 aa9.64□□□□□ -0.87
LRRC28-201ENST00000301981 TCP11L2Q8N4U5 519 aa9.64□□□□□ -0.87
LRRC28-201ENST00000301981 TNNQ9UQP3 1299 aa9.64□□□□□ -0.87
LRRC28-201ENST00000301981 SPAG9O60271 1321 aaKnown RBP9.64□□□□□ -0.87
LRRC28-201ENST00000301981 HFM1A2PYH4 1435 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms