RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 FBXO41Q8TF61 875 aa8.45□□□□□ -1.06
PATL1-201ENST00000300146 FGD6Q6ZV73 1430 aa8.45□□□□□ -1.06
PATL1-201ENST00000300146 NUP155O75694 1391 aa8.44□□□□□ -1.06
PATL1-201ENST00000300146 CFAP74Q9C0B2 1584 aa8.44□□□□□ -1.06
PATL1-201ENST00000300146 LMTK3Q96Q04 1460 aa8.44□□□□□ -1.06
PATL1-201ENST00000300146 CDC42BPAQ5VT25 1732 aa8.44□□□□□ -1.06
PATL1-201ENST00000300146 DIP2CQ9Y2E4 1556 aa8.43□□□□□ -1.06
PATL1-201ENST00000300146 SLC4A1APQ9BWU0 796 aaKnown RBP8.43□□□□□ -1.06
PATL1-201ENST00000300146 ABCC5O15440 1437 aa8.43□□□□□ -1.06
PATL1-201ENST00000300146 LTKP29376 864 aa8.43□□□□□ -1.06
PATL1-201ENST00000300146 PREX2Q70Z35 1606 aa8.43□□□□□ -1.06
PATL1-201ENST00000300146 ABCA6Q8N139 1617 aa8.42□□□□□ -1.06
PATL1-201ENST00000300146 BCORL1Q5H9F3 1711 aa8.42□□□□□ -1.06
PATL1-201ENST00000300146 SIGLEC1Q9BZZ2 1709 aa8.42□□□□□ -1.06
PATL1-201ENST00000300146 NUTM2FA1L443 756 aa8.42□□□□□ -1.06
PATL1-201ENST00000300146 PROSER2Q86WR7 435 aaPredicted RBP8.41□□□□□ -1.06
PATL1-201ENST00000300146 DAPK1P53355 1430 aa8.4□□□□□ -1.06
PATL1-201ENST00000300146 PKD2Q13563 968 aa8.4□□□□□ -1.07
PATL1-201ENST00000300146 KIDINS220Q9ULH0 1771 aa8.39□□□□□ -1.07
PATL1-201ENST00000300146 DISP3Q9P2K9 1392 aa8.39□□□□□ -1.07
PATL1-201ENST00000300146 KDM2AQ9Y2K7 1162 aa8.39□□□□□ -1.07
PATL1-201ENST00000300146 MIA2Q96PC5 1412 aa8.39□□□□□ -1.07
PATL1-201ENST00000300146 ANKRD50Q9ULJ7 1429 aa8.39□□□□□ -1.07
PATL1-201ENST00000300146 ZMYM4Q5VZL5 1548 aa8.39□□□□□ -1.07
PATL1-201ENST00000300146 STK26Q9P289 416 aa8.39□□□□□ -1.07
PATL1-201ENST00000300146 ADAMTSL3P82987 1691 aa8.39□□□□□ -1.07
PATL1-201ENST00000300146 CNTLNQ9NXG0 1405 aa8.39□□□□□ -1.07
PATL1-201ENST00000300146 SAFB2Q14151 953 aaKnown RBP eCLIP8.38□□□□□ -1.07
PATL1-201ENST00000300146 FER1L4A9Z1Z3 1794 aa8.38□□□□□ -1.07
PATL1-201ENST00000300146 KDM5CP41229 1560 aa8.37□□□□□ -1.07
PATL1-201ENST00000300146 PTPRKQ15262 1439 aa8.37□□□□□ -1.07
PATL1-201ENST00000300146 TOM1O60784 492 aa8.37□□□□□ -1.07
PATL1-201ENST00000300146 PHF23Q9BUL5 403 aaPredicted RBP8.37□□□□□ -1.07
PATL1-201ENST00000300146 NCOA1Q15788 1441 aa8.36□□□□□ -1.07
PATL1-201ENST00000300146 RTEL1-TNFRSF6BF6WH68 1400 aa8.36□□□□□ -1.07
PATL1-201ENST00000300146 SETD1BQ9UPS6 1966 aaKnown RBP8.36□□□□□ -1.07
PATL1-201ENST00000300146 ITSN2Q9NZM3 1697 aa8.36□□□□□ -1.07
PATL1-201ENST00000300146 HSPA1LP34931 641 aa8.35□□□□□ -1.07
PATL1-201ENST00000300146 CAMSAP1Q5T5Y3 1602 aa8.34□□□□□ -1.07
PATL1-201ENST00000300146 PTPN23Q9H3S7 1636 aa8.34□□□□□ -1.07
PATL1-201ENST00000300146 CLTCQ00610 1675 aaKnown RBP8.34□□□□□ -1.07
PATL1-201ENST00000300146 FAM135AQ9P2D6 1515 aa8.34□□□□□ -1.07
PATL1-201ENST00000300146 NUTM2BA6NNL0 878 aaPredicted RBP8.33□□□□□ -1.08
PATL1-201ENST00000300146 NUTM2EB1AL46 878 aaPredicted RBP8.33□□□□□ -1.08
PATL1-201ENST00000300146 NEUROD1Q13562 356 aa8.33□□□□□ -1.08
PATL1-201ENST00000300146 NUTM2AQ8IVF1 878 aaPredicted RBP8.33□□□□□ -1.08
PATL1-201ENST00000300146 HDGFP51858 240 aaKnown RBP8.32□□□□□ -1.08
PATL1-201ENST00000300146 LMOD2Q6P5Q4 547 aa8.32□□□□□ -1.08
PATL1-201ENST00000300146 KCNA6P17658 529 aa8.31□□□□□ -1.08
PATL1-201ENST00000300146 SLC52A1Q9NWF4 448 aa8.31□□□□□ -1.08
PATL1-201ENST00000300146 NPATQ14207 1427 aa8.31□□□□□ -1.08
PATL1-201ENST00000300146 TMEM132EQ6IEE7 984 aa8.31□□□□□ -1.08
PATL1-201ENST00000300146 DDX17Q92841 729 aaKnown RBP8.31□□□□□ -1.08
PATL1-201ENST00000300146 AGLP35573 1532 aa8.31□□□□□ -1.08
PATL1-201ENST00000300146 UGGT1Q9NYU2 1555 aa8.3□□□□□ -1.08
PATL1-201ENST00000300146 XPCQ01831 940 aaPredicted RBP8.3□□□□□ -1.08
PATL1-201ENST00000300146 C3P01024 1663 aa8.3□□□□□ -1.08
PATL1-201ENST00000300146 NPHP4O75161 1426 aaPredicted RBP8.29□□□□□ -1.08
PATL1-201ENST00000300146 AMOTL2Q9Y2J4 779 aa8.29□□□□□ -1.08
PATL1-201ENST00000300146 ATF3P18847 181 aa8.29□□□□□ -1.08
PATL1-201ENST00000300146 PCGF6Q9BYE7 350 aa8.29□□□□□ -1.08
PATL1-201ENST00000300146 MPHOSPH9Q99550 1183 aa8.29□□□□□ -1.08
PATL1-201ENST00000300146 INO80Q9ULG1 1556 aaPredicted RBP8.28□□□□□ -1.08
PATL1-201ENST00000300146 DUOX2Q9NRD8 1548 aa8.28□□□□□ -1.08
PATL1-201ENST00000300146 ILDR2Q71H61 639 aa8.28□□□□□ -1.08
PATL1-201ENST00000300146 A2ML1A8K2U0 1454 aa8.27□□□□□ -1.09
PATL1-201ENST00000300146 PZPP20742 1482 aa8.27□□□□□ -1.09
PATL1-201ENST00000300146 KDM5DQ9BY66 1539 aa8.27□□□□□ -1.09
PATL1-201ENST00000300146 TMEM94Q12767 1356 aa8.27□□□□□ -1.09
PATL1-201ENST00000300146 TMEM2Q9UHN6 1383 aa8.27□□□□□ -1.09
PATL1-201ENST00000300146 MEX3CQ5U5Q3 659 aaKnown RBP8.27□□□□□ -1.09
PATL1-201ENST00000300146 HIRIP3Q9BW71 556 aaPredicted RBP8.27□□□□□ -1.09
PATL1-201ENST00000300146 ABCC3O15438 1527 aa8.27□□□□□ -1.09
PATL1-201ENST00000300146 ERVK-7P63135 1459 aa8.27□□□□□ -1.09
PATL1-201ENST00000300146 MAP3K1Q13233 1512 aa8.26□□□□□ -1.09
PATL1-201ENST00000300146 CEP170BQ9Y4F5 1589 aaPredicted RBP8.26□□□□□ -1.09
PATL1-201ENST00000300146 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.25□□□□□ -1.09
PATL1-201ENST00000300146 WAPLQ7Z5K2 1190 aa8.25□□□□□ -1.09
PATL1-201ENST00000300146 ADAMTS2O95450 1211 aa8.24□□□□□ -1.09
PATL1-201ENST00000300146 DCAF11Q8TEB1 546 aa8.24□□□□□ -1.09
PATL1-201ENST00000300146 ERBINQ96RT1 1412 aa8.24□□□□□ -1.09
PATL1-201ENST00000300146 ARHGEF5Q12774 1597 aa8.24□□□□□ -1.09
PATL1-201ENST00000300146 SLAIN2Q9P270 581 aa8.24□□□□□ -1.09
PATL1-201ENST00000300146 RIMS2Q9UQ26 1411 aa8.24□□□□□ -1.09
PATL1-201ENST00000300146 HAP1P54257 671 aaPredicted RBP8.23□□□□□ -1.09
PATL1-201ENST00000300146 POGKQ9P215 609 aa8.23□□□□□ -1.09
PATL1-201ENST00000300146 TRAK1Q9UPV9 953 aa8.23□□□□□ -1.09
PATL1-201ENST00000300146 SRCAPQ6ZRS2 3230 aa8.23□□□□□ -1.09
PATL1-201ENST00000300146 PTPRTO14522 1441 aa8.23□□□□□ -1.09
PATL1-201ENST00000300146 SCAF11Q99590 1463 aaKnown RBP8.23□□□□□ -1.09
PATL1-201ENST00000300146 SHANK2Q9UPX8 1470 aa8.22□□□□□ -1.09
PATL1-201ENST00000300146 ADGBQ8N7X0 1667 aa8.22□□□□□ -1.09
PATL1-201ENST00000300146 ZBTB7CA1YPR0 619 aa8.22□□□□□ -1.09
PATL1-201ENST00000300146 VGFO15240 615 aaPredicted RBP8.22□□□□□ -1.09
PATL1-201ENST00000300146 SIN3AQ96ST3 1273 aa8.22□□□□□ -1.09
PATL1-201ENST00000300146 PLXNC1O60486 1568 aa8.22□□□□□ -1.09
PATL1-201ENST00000300146 PREX1Q8TCU6 1659 aa8.22□□□□□ -1.09
PATL1-201ENST00000300146 CFAP70Q5T0N1 1121 aa8.22□□□□□ -1.09
PATL1-201ENST00000300146 TCOF1Q13428 1488 aaKnown RBP8.22□□□□□ -1.09
PATL1-201ENST00000300146 PRDM15P57071 1507 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms