RNA–Protein interactions for RNA: ENST00000299608.6

TMX3-201, Transcript of thioredoxin related transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMX3, Length 4,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-201ENST00000299608 PRG4Q92954 1404 aaPredicted RBP13.5□□□□□ -0.25
TMX3-201ENST00000299608 CGNL1Q0VF96 1302 aa13.5□□□□□ -0.25
TMX3-201ENST00000299608 ANP32EQ9BTT0 268 aa13.5□□□□□ -0.25
TMX3-201ENST00000299608 KIAA1211Q6ZU35 1233 aa13.49□□□□□ -0.25
TMX3-201ENST00000299608 TRIM44Q96DX7 344 aaPredicted RBP13.49□□□□□ -0.25
TMX3-201ENST00000299608 TMEM132EQ6IEE7 984 aa13.49□□□□□ -0.25
TMX3-201ENST00000299608 RWDD1Q9H446 243 aaPredicted RBP13.49□□□□□ -0.25
TMX3-201ENST00000299608 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
TMX3-201ENST00000299608 PTMAP06454 111 aaKnown RBP13.49□□□□□ -0.25
TMX3-201ENST00000299608 MCCP23508 829 aa13.49□□□□□ -0.25
TMX3-201ENST00000299608 BCL2L13Q9BXK5 485 aa13.47□□□□□ -0.25
TMX3-201ENST00000299608 USP47Q96K76 1375 aa13.47□□□□□ -0.25
TMX3-201ENST00000299608 TEFQ10587 303 aa13.47□□□□□ -0.25
TMX3-201ENST00000299608 C1orf141Q5JVX7 400 aa13.47□□□□□ -0.25
TMX3-201ENST00000299608 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.46□□□□□ -0.25
TMX3-201ENST00000299608 CENPJQ9HC77 1338 aaPredicted RBP13.46□□□□□ -0.25
TMX3-201ENST00000299608 GOLGA6L4A6NEF3 574 aa13.46□□□□□ -0.25
TMX3-201ENST00000299608 HSCBQ8IWL3 235 aa13.46□□□□□ -0.25
TMX3-201ENST00000299608 NGEFQ8N5V2 710 aa13.46□□□□□ -0.26
TMX3-201ENST00000299608 SYTL4Q96C24 671 aaPredicted RBP13.46□□□□□ -0.26
TMX3-201ENST00000299608 PHLDB1Q86UU1 1377 aa13.45□□□□□ -0.26
TMX3-201ENST00000299608 ATF3P18847 181 aa13.45□□□□□ -0.26
TMX3-201ENST00000299608 NUTM2GQ5VZR2 741 aa13.45□□□□□ -0.26
TMX3-201ENST00000299608 FGD6Q6ZV73 1430 aa13.45□□□□□ -0.26
TMX3-201ENST00000299608 MSH5O43196 834 aa13.45□□□□□ -0.26
TMX3-201ENST00000299608 CFTRP13569 1480 aa13.44□□□□□ -0.26
TMX3-201ENST00000299608 MYBBP1AQ9BQG0 1328 aaKnown RBP13.44□□□□□ -0.26
TMX3-201ENST00000299608 G3V3G9 751 aa13.44□□□□□ -0.26
TMX3-201ENST00000299608 DCAF8Q5TAQ9 597 aa13.44□□□□□ -0.26
TMX3-201ENST00000299608 HDAC5Q9UQL6 1122 aa13.44□□□□□ -0.26
TMX3-201ENST00000299608 ANKRD50Q9ULJ7 1429 aa13.43□□□□□ -0.26
TMX3-201ENST00000299608 HMMRO75330 724 aa13.43□□□□□ -0.26
TMX3-201ENST00000299608 FRAT2O75474 233 aaPredicted RBP13.43□□□□□ -0.26
TMX3-201ENST00000299608 RAPGEF3O95398 923 aa13.43□□□□□ -0.26
TMX3-201ENST00000299608 TRIM6-TRIM34B2RNG4 842 aa13.43□□□□□ -0.26
TMX3-201ENST00000299608 TXNDC2Q86VQ3 553 aa13.43□□□□□ -0.26
TMX3-201ENST00000299608 EIF2S2P20042 333 aaKnown RBP13.42□□□□□ -0.26
TMX3-201ENST00000299608 PRDM2Q13029 1718 aa13.42□□□□□ -0.26
TMX3-201ENST00000299608 APAF1O14727 1248 aa13.42□□□□□ -0.26
TMX3-201ENST00000299608 PRKRIP1Q9H875 184 aaPredicted RBP13.42□□□□□ -0.26
TMX3-201ENST00000299608 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
TMX3-201ENST00000299608 TCERG1O14776 1098 aaKnown RBP13.41□□□□□ -0.26
TMX3-201ENST00000299608 MEX3CQ5U5Q3 659 aaKnown RBP13.41□□□□□ -0.26
TMX3-201ENST00000299608 NECTIN2Q92692 538 aa13.41□□□□□ -0.26
TMX3-201ENST00000299608 CABP2Q9NPB3 220 aa13.41□□□□□ -0.26
TMX3-201ENST00000299608 CFAP70Q5T0N1 1121 aa13.41□□□□□ -0.26
TMX3-201ENST00000299608 GGNBP2Q9H3C7 697 aa13.41□□□□□ -0.26
TMX3-201ENST00000299608 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
TMX3-201ENST00000299608 GNL2Q13823 731 aaKnown RBP13.4□□□□□ -0.26
TMX3-201ENST00000299608 TTC5Q8N0Z6 440 aa13.4□□□□□ -0.26
TMX3-201ENST00000299608 CC2D2AQ9P2K1 1620 aa13.4□□□□□ -0.26
TMX3-201ENST00000299608 PDE3BQ13370 1112 aa13.39□□□□□ -0.27
TMX3-201ENST00000299608 SYNJ2O15056 1496 aa13.39□□□□□ -0.27
TMX3-201ENST00000299608 NLRP6P59044 892 aa13.38□□□□□ -0.27
TMX3-201ENST00000299608 PMFBP1Q8TBY8 1022 aa13.38□□□□□ -0.27
TMX3-201ENST00000299608 CFAP44Q96MT7 982 aa13.38□□□□□ -0.27
TMX3-201ENST00000299608 NOP58Q9Y2X3 529 aaKnown RBP13.38□□□□□ -0.27
TMX3-201ENST00000299608 ARHGAP5Q13017 1502 aa13.38□□□□□ -0.27
TMX3-201ENST00000299608 NLRP2Q9NX02 1062 aa13.38□□□□□ -0.27
TMX3-201ENST00000299608 PROSER2Q86WR7 435 aaPredicted RBP13.37□□□□□ -0.27
TMX3-201ENST00000299608 GPATCH3Q96I76 525 aa13.37□□□□□ -0.27
TMX3-201ENST00000299608 NCOA2Q15596 1464 aa13.37□□□□□ -0.27
TMX3-201ENST00000299608 SCAPERQ9BY12 1400 aa13.37□□□□□ -0.27
TMX3-201ENST00000299608 DNTTIP2Q5QJE6 756 aaKnown RBP13.37□□□□□ -0.27
TMX3-201ENST00000299608 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
TMX3-201ENST00000299608 HMOX1P09601 288 aa13.37□□□□□ -0.27
TMX3-201ENST00000299608 MFAP1P55081 439 aaKnown RBP13.36□□□□□ -0.27
TMX3-201ENST00000299608 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
TMX3-201ENST00000299608 PLIN1O60240 522 aa13.36□□□□□ -0.27
TMX3-201ENST00000299608 LRRC9Q6ZRR7 1453 aa13.36□□□□□ -0.27
TMX3-201ENST00000299608 CASKIN1Q8WXD9 1431 aa13.36□□□□□ -0.27
TMX3-201ENST00000299608 CLSTN1O94985 981 aa13.36□□□□□ -0.27
TMX3-201ENST00000299608 RAPGEF4Q8WZA2 1011 aa13.36□□□□□ -0.27
TMX3-201ENST00000299608 TOMM22Q9NS69 142 aa13.36□□□□□ -0.27
TMX3-201ENST00000299608 RIPK4P57078 832 aa13.35□□□□□ -0.27
TMX3-201ENST00000299608 TOPBP1Q92547 1522 aa13.35□□□□□ -0.27
TMX3-201ENST00000299608 POLA1P09884 1462 aaPredicted RBP13.34□□□□□ -0.27
TMX3-201ENST00000299608 KIF21BO75037 1637 aa13.34□□□□□ -0.27
TMX3-201ENST00000299608 ESCO1Q5FWF5 840 aa13.34□□□□□ -0.27
TMX3-201ENST00000299608 SLKQ9H2G2 1235 aaPredicted RBP13.34□□□□□ -0.27
TMX3-201ENST00000299608 NOL8Q76FK4 1167 aaKnown RBP13.33□□□□□ -0.28
TMX3-201ENST00000299608 SNAPC4Q5SXM2 1469 aa13.33□□□□□ -0.28
TMX3-201ENST00000299608 NEXNQ0ZGT2 675 aa13.33□□□□□ -0.28
TMX3-201ENST00000299608 STAC3Q96MF2 364 aa13.33□□□□□ -0.28
TMX3-201ENST00000299608 SLC26A8Q96RN1 970 aa13.33□□□□□ -0.28
TMX3-201ENST00000299608 ARAP1Q96P48 1450 aa13.32□□□□□ -0.28
TMX3-201ENST00000299608 E9PSI1 815 aa13.32□□□□□ -0.28
TMX3-201ENST00000299608 C9orf78Q9NZ63 289 aaPredicted RBP13.32□□□□□ -0.28
TMX3-201ENST00000299608 THEMISQ8N1K5 641 aaPredicted RBP13.32□□□□□ -0.28
TMX3-201ENST00000299608 COG6Q9Y2V7 657 aa13.31□□□□□ -0.28
TMX3-201ENST00000299608 ABTB2Q8N961 1025 aa13.31□□□□□ -0.28
TMX3-201ENST00000299608 ZKSCAN2Q63HK3 967 aa13.31□□□□□ -0.28
TMX3-201ENST00000299608 PRAM1Q96QH2 718 aa13.31□□□□□ -0.28
TMX3-201ENST00000299608 FYCO1Q9BQS8 1478 aa13.31□□□□□ -0.28
TMX3-201ENST00000299608 NBPF1Q3BBV0 1214 aa13.3□□□□□ -0.28
TMX3-201ENST00000299608 CUX1P39880 1505 aa13.3□□□□□ -0.28
TMX3-201ENST00000299608 AMER1Q5JTC6 1135 aaPredicted RBP13.3□□□□□ -0.28
TMX3-201ENST00000299608 SYNJ1O43426 1573 aa13.3□□□□□ -0.28
TMX3-201ENST00000299608 KIF7Q2M1P5 1343 aa13.3□□□□□ -0.28
TMX3-201ENST00000299608 HSP90B1P14625 803 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms