RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 NUDCQ9Y266 331 aa22.61■■□□□ 1.21
RPN1-201ENST00000296255 E9PCH4 1651 aa22.59■■□□□ 1.21
RPN1-201ENST00000296255 RNF123Q5XPI4 1314 aa22.58■■□□□ 1.21
RPN1-201ENST00000296255 SENP3-EIF4A1A0A087X0R7 540 aa22.57■■□□□ 1.2
RPN1-201ENST00000296255 TMC1Q8TDI8 760 aa22.57■■□□□ 1.2
RPN1-201ENST00000296255 TRPM1Q7Z4N2 1603 aa22.55■■□□□ 1.2
RPN1-201ENST00000296255 SYCP2Q9BX26 1530 aa22.55■■□□□ 1.2
RPN1-201ENST00000296255 LRPPRCP42704 1394 aaKnown RBP22.55■■□□□ 1.2
RPN1-201ENST00000296255 PRAG1Q86YV5 1406 aa22.55■■□□□ 1.2
RPN1-201ENST00000296255 RSPH4AQ5TD94 716 aa22.54■■□□□ 1.2
RPN1-201ENST00000296255 TTC37Q6PGP7 1564 aa22.54■■□□□ 1.2
RPN1-201ENST00000296255 PLA2R1Q13018 1463 aa22.53■■□□□ 1.2
RPN1-201ENST00000296255 UNC13BO14795 1591 aa22.53■■□□□ 1.2
RPN1-201ENST00000296255 MYBBP1AQ9BQG0 1328 aaKnown RBP22.52■■□□□ 1.2
RPN1-201ENST00000296255 BRD4O60885 1362 aaPredicted RBP22.52■■□□□ 1.2
RPN1-201ENST00000296255 CCDC144AA2RUR9 1427 aa22.52■■□□□ 1.2
RPN1-201ENST00000296255 MAST1Q9Y2H9 1570 aa22.52■■□□□ 1.2
RPN1-201ENST00000296255 KTN1Q86UP2 1357 aaKnown RBP22.51■■□□□ 1.19
RPN1-201ENST00000296255 RALBP1Q15311 655 aa22.5■■□□□ 1.19
RPN1-201ENST00000296255 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.5■■□□□ 1.193e-13■■■□□ 19.1
RPN1-201ENST00000296255 ARHGAP5Q13017 1502 aa22.49■■□□□ 1.19
RPN1-201ENST00000296255 CHD1O14646 1710 aa22.48■■□□□ 1.19
RPN1-201ENST00000296255 NBPF1Q3BBV0 1214 aa22.48■■□□□ 1.19
RPN1-201ENST00000296255 A2MP01023 1474 aa22.47■■□□□ 1.19
RPN1-201ENST00000296255 RGL3Q3MIN7 710 aa22.47■■□□□ 1.19
RPN1-201ENST00000296255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.45■■□□□ 1.188e-7■■□□□ 11.6
RPN1-201ENST00000296255 GPRASP1Q5JY77 1395 aa22.45■■□□□ 1.18
RPN1-201ENST00000296255 SHROOM2Q13796 1616 aa22.45■■□□□ 1.18
RPN1-201ENST00000296255 IQGAP3Q86VI3 1631 aa22.44■■□□□ 1.18
RPN1-201ENST00000296255 PLXNC1O60486 1568 aa22.44■■□□□ 1.18
RPN1-201ENST00000296255 PLEKHH2Q8IVE3 1493 aa22.44■■□□□ 1.18
RPN1-201ENST00000296255 PARD3Q8TEW0 1356 aa22.43■■□□□ 1.18
RPN1-201ENST00000296255 MYO5CQ9NQX4 1742 aa22.42■■□□□ 1.18
RPN1-201ENST00000296255 PER1O15534 1290 aaPredicted RBP22.41■■□□□ 1.18
RPN1-201ENST00000296255 ERCC6L2Q5T890 1561 aa22.41■■□□□ 1.18
RPN1-201ENST00000296255 LAMC1P11047 1609 aa22.41■■□□□ 1.18
RPN1-201ENST00000296255 PRDM15P57071 1507 aaPredicted RBP22.41■■□□□ 1.18
RPN1-201ENST00000296255 CCDC136Q96JN2 1154 aa22.4■■□□□ 1.18
RPN1-201ENST00000296255 COL17A1Q9UMD9 1497 aaPredicted RBP22.39■■□□□ 1.18
RPN1-201ENST00000296255 ABCC2Q92887 1545 aa22.39■■□□□ 1.17
RPN1-201ENST00000296255 NLRP13Q86W25 1043 aa22.39■■□□□ 1.17
RPN1-201ENST00000296255 TESK2Q96S53 571 aa22.38■■□□□ 1.17
RPN1-201ENST00000296255 DISP3Q9P2K9 1392 aa22.38■■□□□ 1.17
RPN1-201ENST00000296255 DUOX2Q9NRD8 1548 aa22.37■■□□□ 1.17
RPN1-201ENST00000296255 MAGI2Q86UL8 1455 aa22.36■■□□□ 1.17
RPN1-201ENST00000296255 ATP10AO60312 1499 aa22.36■■□□□ 1.17
RPN1-201ENST00000296255 ERICH6Q7L0X2 663 aa22.34■■□□□ 1.17
RPN1-201ENST00000296255 EIF2AK4Q9P2K8 1649 aaKnown RBP22.34■■□□□ 1.17
RPN1-201ENST00000296255 ERBINQ96RT1 1412 aa22.33■■□□□ 1.16
RPN1-201ENST00000296255 RRP1P56182 461 aaKnown RBP22.3■■□□□ 1.16
RPN1-201ENST00000296255 SALL2Q9Y467 1007 aaPredicted RBP22.3■■□□□ 1.16
RPN1-201ENST00000296255 PLCH2O75038 1416 aa22.3■■□□□ 1.16
RPN1-201ENST00000296255 CC2D1BQ5T0F9 858 aaKnown RBP22.29■■□□□ 1.16
RPN1-201ENST00000296255 WASHC2CQ9Y4E1 1318 aa22.29■■□□□ 1.16
RPN1-201ENST00000296255 PANK3Q9H999 370 aa22.29■■□□□ 1.16
RPN1-201ENST00000296255 RNF17Q9BXT8 1623 aaKnown RBP22.28■■□□□ 1.16
RPN1-201ENST00000296255 RCAN3Q9UKA8 241 aa22.28■■□□□ 1.16
RPN1-201ENST00000296255 ZCCHC11Q5TAX3 1644 aaKnown RBP22.26■■□□□ 1.15
RPN1-201ENST00000296255 PDE3BQ13370 1112 aa22.25■■□□□ 1.15
RPN1-201ENST00000296255 ABCC1P33527 1531 aa22.25■■□□□ 1.15
RPN1-201ENST00000296255 EXOC6Q8TAG9 804 aa22.25■■□□□ 1.15
RPN1-201ENST00000296255 TRAPPC8Q9Y2L5 1435 aa22.25■■□□□ 1.15
RPN1-201ENST00000296255 TMF1P82094 1093 aa22.24■■□□□ 1.15
RPN1-201ENST00000296255 CDCA7LQ96GN5 454 aa22.24■■□□□ 1.15
RPN1-201ENST00000296255 BLMP54132 1417 aaPredicted RBP22.24■■□□□ 1.15
RPN1-201ENST00000296255 EFCAB2Q5VUJ9 269 aa22.23■■□□□ 1.15
RPN1-201ENST00000296255 INSRP06213 1382 aa22.21■■□□□ 1.15
RPN1-201ENST00000296255 MADDQ8WXG6 1647 aa22.21■■□□□ 1.15
RPN1-201ENST00000296255 ZMYM4Q5VZL5 1548 aa22.2■■□□□ 1.14
RPN1-201ENST00000296255 NOP58Q9Y2X3 529 aaKnown RBP22.18■■□□□ 1.14
RPN1-201ENST00000296255 WDR7Q9Y4E6 1490 aa22.18■■□□□ 1.14
RPN1-201ENST00000296255 IQGAP1P46940 1657 aa22.18■■□□□ 1.14
RPN1-201ENST00000296255 UHRF1BP1LA0JNW5 1464 aa22.18■■□□□ 1.14
RPN1-201ENST00000296255 PAK3O75914 559 aaPredicted RBP22.17■■□□□ 1.14
RPN1-201ENST00000296255 TRPM2O94759 1503 aa22.15■■□□□ 1.14
RPN1-201ENST00000296255 SPHKAPQ2M3C7 1700 aa22.14■■□□□ 1.13
RPN1-201ENST00000296255 ZFYVE16Q7Z3T8 1539 aa22.14■■□□□ 1.13
RPN1-201ENST00000296255 AFAP1Q8N556 730 aa22.13■■□□□ 1.13
RPN1-201ENST00000296255 SPAG9O60271 1321 aaKnown RBP22.13■■□□□ 1.13
RPN1-201ENST00000296255 CLASP1Q7Z460 1538 aa22.13■■□□□ 1.13
RPN1-201ENST00000296255 CEP152O94986 1710 aa22.13■■□□□ 1.13
RPN1-201ENST00000296255 CLTCL1P53675 1640 aa22.12■■□□□ 1.13
RPN1-201ENST00000296255 RTEL1-TNFRSF6BF6WH68 1400 aa22.11■■□□□ 1.13
RPN1-201ENST00000296255 PTPRTO14522 1441 aa22.11■■□□□ 1.13
RPN1-201ENST00000296255 IPO9Q96P70 1041 aaKnown RBP22.1■■□□□ 1.13
RPN1-201ENST00000296255 BCL11AQ9H165 835 aa22.1■■□□□ 1.13
RPN1-201ENST00000296255 ADAMTS8Q9UP79 889 aa22.1■■□□□ 1.13
RPN1-201ENST00000296255 DEPDC5O75140 1603 aa22.1■■□□□ 1.13
RPN1-201ENST00000296255 PLIN1O60240 522 aa22.09■■□□□ 1.13
RPN1-201ENST00000296255 ANP32AP39687 249 aaKnown RBP22.09■■□□□ 1.13
RPN1-201ENST00000296255 SCAPERQ9BY12 1400 aa22.08■■□□□ 1.13
RPN1-201ENST00000296255 PPP2R1AP30153 589 aa22.08■■□□□ 1.12
RPN1-201ENST00000296255 AMER1Q5JTC6 1135 aaPredicted RBP22.08■■□□□ 1.12
RPN1-201ENST00000296255 ARAP3Q8WWN8 1544 aa22.08■■□□□ 1.12
RPN1-201ENST00000296255 SCAF11Q99590 1463 aaKnown RBP22.08■■□□□ 1.12
RPN1-201ENST00000296255 KNSTRNQ9Y448 316 aa22.07■■□□□ 1.12
RPN1-201ENST00000296255 SYNMO15061 1565 aa22.06■■□□□ 1.12
RPN1-201ENST00000296255 TET3O43151 1660 aa22.06■■□□□ 1.12
RPN1-201ENST00000296255 TCERG1O14776 1098 aaKnown RBP22.06■■□□□ 1.12
RPN1-201ENST00000296255 MYOM1P52179 1685 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms