RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 CC2D1BQ5T0F9 858 aaKnown RBP23.79■■□□□ 1.4
SYVN1-201ENST00000294256 RALGAPBQ86X10 1494 aa23.79■■□□□ 1.4
SYVN1-201ENST00000294256 PPP4R2Q9NY27 417 aa23.78■■□□□ 1.4
SYVN1-201ENST00000294256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.78■■□□□ 1.4
SYVN1-201ENST00000294256 EFCAB2Q5VUJ9 269 aa23.76■■□□□ 1.39
SYVN1-201ENST00000294256 UHRF1BP1Q6BDS2 1440 aa23.75■■□□□ 1.39
SYVN1-201ENST00000294256 PNISRQ8TF01 805 aaKnown RBP23.75■■□□□ 1.39
SYVN1-201ENST00000294256 PREX2Q70Z35 1606 aa23.74■■□□□ 1.39
SYVN1-201ENST00000294256 ARHGEF5Q12774 1597 aa23.74■■□□□ 1.39
SYVN1-201ENST00000294256 ARHGEF12Q9NZN5 1544 aa23.71■■□□□ 1.39
SYVN1-201ENST00000294256 POLR1AO95602 1720 aaPredicted RBP23.7■■□□□ 1.39
SYVN1-201ENST00000294256 PLA2R1Q13018 1463 aa23.69■■□□□ 1.38
SYVN1-201ENST00000294256 NUDCQ9Y266 331 aa23.68■■□□□ 1.38
SYVN1-201ENST00000294256 ARID4BQ4LE39 1312 aaPredicted RBP23.68■■□□□ 1.38
SYVN1-201ENST00000294256 PRAG1Q86YV5 1406 aa23.67■■□□□ 1.38
SYVN1-201ENST00000294256 KDM5DQ9BY66 1539 aa23.67■■□□□ 1.38
SYVN1-201ENST00000294256 SPAG9O60271 1321 aaKnown RBP23.67■■□□□ 1.38
SYVN1-201ENST00000294256 TRAPPC8Q9Y2L5 1435 aa23.67■■□□□ 1.38
SYVN1-201ENST00000294256 ABCC2Q92887 1545 aa23.67■■□□□ 1.38
SYVN1-201ENST00000294256 MYBBP1AQ9BQG0 1328 aaKnown RBP23.66■■□□□ 1.38
SYVN1-201ENST00000294256 PANK3Q9H999 370 aa23.66■■□□□ 1.38
SYVN1-201ENST00000294256 ANP32EQ9BTT0 268 aa23.65■■□□□ 1.38
SYVN1-201ENST00000294256 A2MP01023 1474 aa23.64■■□□□ 1.37
SYVN1-201ENST00000294256 DISP3Q9P2K9 1392 aa23.63■■□□□ 1.37
SYVN1-201ENST00000294256 MYT1Q01538 1121 aa23.62■■□□□ 1.37
SYVN1-201ENST00000294256 RALBP1Q15311 655 aa23.61■■□□□ 1.37
SYVN1-201ENST00000294256 CCDC136Q96JN2 1154 aa23.6■■□□□ 1.37
SYVN1-201ENST00000294256 KTN1Q86UP2 1357 aaKnown RBP23.6■■□□□ 1.37
SYVN1-201ENST00000294256 MYO5CQ9NQX4 1742 aa23.6■■□□□ 1.37
SYVN1-201ENST00000294256 KIF3BO15066 747 aa23.59■■□□□ 1.37
SYVN1-201ENST00000294256 PLCH2O75038 1416 aa23.59■■□□□ 1.37
SYVN1-201ENST00000294256 TESK2Q96S53 571 aa23.58■■□□□ 1.37
SYVN1-201ENST00000294256 TMF1P82094 1093 aa23.57■■□□□ 1.36
SYVN1-201ENST00000294256 SMG6Q86US8 1419 aaKnown RBP23.57■■□□□ 1.36
SYVN1-201ENST00000294256 MSH5O43196 834 aa23.57■■□□□ 1.36
SYVN1-201ENST00000294256 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
SYVN1-201ENST00000294256 NLRP13Q86W25 1043 aa23.56■■□□□ 1.36
SYVN1-201ENST00000294256 SHROOM2Q13796 1616 aa23.55■■□□□ 1.36
SYVN1-201ENST00000294256 ERICH6BQ5W0A0 696 aa23.54■■□□□ 1.36
SYVN1-201ENST00000294256 CDCA7LQ96GN5 454 aa23.54■■□□□ 1.36
SYVN1-201ENST00000294256 CHGAP10645 457 aaKnown RBP23.54■■□□□ 1.36
SYVN1-201ENST00000294256 ZCCHC11Q5TAX3 1644 aaKnown RBP23.54■■□□□ 1.36
SYVN1-201ENST00000294256 PER1O15534 1290 aaPredicted RBP23.54■■□□□ 1.36
SYVN1-201ENST00000294256 BRD4O60885 1362 aaPredicted RBP23.53■■□□□ 1.36
SYVN1-201ENST00000294256 DUOX2Q9NRD8 1548 aa23.52■■□□□ 1.36
SYVN1-201ENST00000294256 TRPM1Q7Z4N2 1603 aa23.51■■□□□ 1.35
SYVN1-201ENST00000294256 ERBINQ96RT1 1412 aa23.5■■□□□ 1.35
SYVN1-201ENST00000294256 ERICH6Q7L0X2 663 aa23.5■■□□□ 1.35
SYVN1-201ENST00000294256 SCAPERQ9BY12 1400 aa23.49■■□□□ 1.35
SYVN1-201ENST00000294256 UNC13BO14795 1591 aa23.49■■□□□ 1.35
SYVN1-201ENST00000294256 PLIN1O60240 522 aa23.46■■□□□ 1.35
SYVN1-201ENST00000294256 MAST1Q9Y2H9 1570 aa23.45■■□□□ 1.35
SYVN1-201ENST00000294256 KNSTRNQ9Y448 316 aa23.45■■□□□ 1.34
SYVN1-201ENST00000294256 EXOC6Q8TAG9 804 aa23.44■■□□□ 1.34
SYVN1-201ENST00000294256 LRPPRCP42704 1394 aaKnown RBP23.44■■□□□ 1.34
SYVN1-201ENST00000294256 IQGAP3Q86VI3 1631 aa23.44■■□□□ 1.34
SYVN1-201ENST00000294256 RCAN3Q9UKA8 241 aa23.43■■□□□ 1.34
SYVN1-201ENST00000294256 PARD3Q8TEW0 1356 aa23.43■■□□□ 1.34
SYVN1-201ENST00000294256 PLXNC1O60486 1568 aa23.43■■□□□ 1.34
SYVN1-201ENST00000294256 ABCC1P33527 1531 aa23.42■■□□□ 1.34
SYVN1-201ENST00000294256 CFAP70Q5T0N1 1121 aa23.42■■□□□ 1.34
SYVN1-201ENST00000294256 GPRASP1Q5JY77 1395 aa23.42■■□□□ 1.34
SYVN1-201ENST00000294256 COL17A1Q9UMD9 1497 aaPredicted RBP23.42■■□□□ 1.34
SYVN1-201ENST00000294256 GGT6Q6P531 493 aa23.4■■□□□ 1.34
SYVN1-201ENST00000294256 ADAMTS8Q9UP79 889 aa23.39■■□□□ 1.34
SYVN1-201ENST00000294256 FANCAO15360 1455 aa23.39■■□□□ 1.33
SYVN1-201ENST00000294256 RRP1P56182 461 aaKnown RBP23.39■■□□□ 1.33
SYVN1-201ENST00000294256 KANK1Q14678 1352 aa23.38■■□□□ 1.33
SYVN1-201ENST00000294256 NUTM2DQ5VT03 806 aaPredicted RBP23.37■■□□□ 1.33
SYVN1-201ENST00000294256 CLASP1Q7Z460 1538 aa23.36■■□□□ 1.33
SYVN1-201ENST00000294256 PRDM15P57071 1507 aaPredicted RBP23.36■■□□□ 1.33
SYVN1-201ENST00000294256 WDR43Q15061 677 aaKnown RBP eCLIP23.35■■□□□ 1.33
SYVN1-201ENST00000294256 ATP10AO60312 1499 aa23.35■■□□□ 1.33
SYVN1-201ENST00000294256 NPM1P06748 294 aaKnown RBP eCLIP23.35■■□□□ 1.33
SYVN1-201ENST00000294256 CCDC146Q8IYE0 955 aa23.34■■□□□ 1.33
SYVN1-201ENST00000294256 ADGRF5Q8IZF2 1346 aa23.34■■□□□ 1.33
SYVN1-201ENST00000294256 E9PCH4 1651 aa23.34■■□□□ 1.33
SYVN1-201ENST00000294256 RNF123Q5XPI4 1314 aa23.33■■□□□ 1.33
SYVN1-201ENST00000294256 UGGT1Q9NYU2 1555 aa23.33■■□□□ 1.33
SYVN1-201ENST00000294256 ADGRL1O94910 1474 aa23.33■■□□□ 1.33
SYVN1-201ENST00000294256 WDR7Q9Y4E6 1490 aa23.32■■□□□ 1.32
SYVN1-201ENST00000294256 FANCIQ9NVI1 1328 aa23.32■■□□□ 1.32
SYVN1-201ENST00000294256 PPP2R1AP30153 589 aa23.32■■□□□ 1.32
SYVN1-201ENST00000294256 UHRF1BP1LA0JNW5 1464 aa23.31■■□□□ 1.32
SYVN1-201ENST00000294256 TNNT2P45379 298 aaPredicted RBP23.31■■□□□ 1.32
SYVN1-201ENST00000294256 SKAP1Q86WV1 359 aa23.31■■□□□ 1.32
SYVN1-201ENST00000294256 ZFYVE16Q7Z3T8 1539 aa23.3■■□□□ 1.32
SYVN1-201ENST00000294256 MAGI2Q86UL8 1455 aa23.3■■□□□ 1.32
SYVN1-201ENST00000294256 NPM2Q86SE8 214 aaKnown RBP23.29■■□□□ 1.32
SYVN1-201ENST00000294256 TRAK1Q9UPV9 953 aa23.28■■□□□ 1.32
SYVN1-201ENST00000294256 EIF2AK4Q9P2K8 1649 aaKnown RBP23.28■■□□□ 1.32
SYVN1-201ENST00000294256 ASXL2Q76L83 1435 aa23.28■■□□□ 1.32
SYVN1-201ENST00000294256 CFAP65Q6ZU64 1925 aaKnown RBP23.27■■□□□ 1.32
SYVN1-201ENST00000294256 ATP7AQ04656 1500 aa23.26■■□□□ 1.31
SYVN1-201ENST00000294256 TMEM132EQ6IEE7 984 aa23.26■■□□□ 1.31
SYVN1-201ENST00000294256 AMER1Q5JTC6 1135 aaPredicted RBP23.25■■□□□ 1.31
SYVN1-201ENST00000294256 CLTCL1P53675 1640 aa23.25■■□□□ 1.31
SYVN1-201ENST00000294256 CDCA8Q53HL2 280 aa23.25■■□□□ 1.31
SYVN1-201ENST00000294256 WASHC2CQ9Y4E1 1318 aa23.24■■□□□ 1.31
SYVN1-201ENST00000294256 RTEL1-TNFRSF6BF6WH68 1400 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms