RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
SMG9-201ENST00000270066 COG3Q96JB2 828 aa16.7■□□□□ 0.26
SMG9-201ENST00000270066 ST20-MTHFSA0A0A6YYL1 179 aa16.7■□□□□ 0.26
SMG9-201ENST00000270066 CGNL1Q0VF96 1302 aa16.7■□□□□ 0.26
SMG9-201ENST00000270066 DHX57Q6P158 1386 aaKnown RBP16.7■□□□□ 0.26
SMG9-201ENST00000270066 NUTM2FA1L443 756 aa16.69■□□□□ 0.26
SMG9-201ENST00000270066 PLCB2Q00722 1185 aa16.69■□□□□ 0.26
SMG9-201ENST00000270066 TAF7LQ5H9L4 462 aa16.69■□□□□ 0.26
SMG9-201ENST00000270066 ISY1Q9ULR0 285 aaKnown RBP16.69■□□□□ 0.26
SMG9-201ENST00000270066 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
SMG9-201ENST00000270066 GORABQ5T7V8 394 aa16.69■□□□□ 0.26
SMG9-201ENST00000270066 CCDC146Q8IYE0 955 aa16.69■□□□□ 0.26
SMG9-201ENST00000270066 LTV1Q96GA3 475 aaPredicted RBP16.69■□□□□ 0.26
SMG9-201ENST00000270066 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
SMG9-201ENST00000270066 CENPJQ9HC77 1338 aaPredicted RBP16.69■□□□□ 0.26
SMG9-201ENST00000270066 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.68■□□□□ 0.26
SMG9-201ENST00000270066 AQRO60306 1485 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■■■■ 28.7
SMG9-201ENST00000270066 FAM69CQ0P6D2 419 aa16.68■□□□□ 0.26
SMG9-201ENST00000270066 PANK3Q9H999 370 aa16.68■□□□□ 0.26
SMG9-201ENST00000270066 GNL2Q13823 731 aaKnown RBP16.67■□□□□ 0.26
SMG9-201ENST00000270066 CHMP3Q9Y3E7 222 aa16.67■□□□□ 0.26
SMG9-201ENST00000270066 SPRYD3Q8NCJ5 442 aa16.65■□□□□ 0.26
SMG9-201ENST00000270066 STAC3Q96MF2 364 aa16.65■□□□□ 0.26
SMG9-201ENST00000270066 TCERG1O14776 1098 aaKnown RBP16.64■□□□□ 0.25
SMG9-201ENST00000270066 FGD6Q6ZV73 1430 aa16.64■□□□□ 0.25
SMG9-201ENST00000270066 USP47Q96K76 1375 aa16.64■□□□□ 0.25
SMG9-201ENST00000270066 SLC4A10Q6U841 1118 aa16.63■□□□□ 0.25
SMG9-201ENST00000270066 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
SMG9-201ENST00000270066 C1orf141Q5JVX7 400 aa16.62■□□□□ 0.25
SMG9-201ENST00000270066 L1TD1Q5T7N2 865 aaKnown RBP16.62■□□□□ 0.25
SMG9-201ENST00000270066 PTMSP20962 102 aa16.62■□□□□ 0.25
SMG9-201ENST00000270066 MINK1Q8N4C8 1332 aaPredicted RBP16.62■□□□□ 0.25
SMG9-201ENST00000270066 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
SMG9-201ENST00000270066 FYCO1Q9BQS8 1478 aa16.61■□□□□ 0.25
SMG9-201ENST00000270066 CASKIN1Q8WXD9 1431 aa16.61■□□□□ 0.25
SMG9-201ENST00000270066 HTATSF1O43719 755 aaKnown RBP16.6■□□□□ 0.25
SMG9-201ENST00000270066 EVA1CP58658 441 aa16.59■□□□□ 0.25
SMG9-201ENST00000270066 ARID3AQ99856 593 aa16.59■□□□□ 0.25
SMG9-201ENST00000270066 TRIM6-TRIM34B2RNG4 842 aa16.58■□□□□ 0.25
SMG9-201ENST00000270066 SYNJ2O15056 1496 aa16.58■□□□□ 0.25
SMG9-201ENST00000270066 IFT140Q96RY7 1462 aa16.58■□□□□ 0.24
SMG9-201ENST00000270066 G3V3G9 751 aa16.58■□□□□ 0.24
SMG9-201ENST00000270066 DCAF8Q5TAQ9 597 aa16.58■□□□□ 0.24
SMG9-201ENST00000270066 GBP4Q96PP9 640 aa16.58■□□□□ 0.24
SMG9-201ENST00000270066 CFTRP13569 1480 aa16.57■□□□□ 0.24
SMG9-201ENST00000270066 ARHGAP5Q13017 1502 aa16.57■□□□□ 0.24
SMG9-201ENST00000270066 LRRC9Q6ZRR7 1453 aa16.57■□□□□ 0.24
SMG9-201ENST00000270066 GTF2E1P29083 439 aaPredicted RBP16.57■□□□□ 0.24
SMG9-201ENST00000270066 CLUAP1Q96AJ1 413 aa16.57■□□□□ 0.24
SMG9-201ENST00000270066 KIF21BO75037 1637 aa16.57■□□□□ 0.24
SMG9-201ENST00000270066 IPO9Q96P70 1041 aaKnown RBP16.56■□□□□ 0.24
SMG9-201ENST00000270066 ERICH3Q5RHP9 1530 aa16.56■□□□□ 0.24
SMG9-201ENST00000270066 MSNP26038 577 aaKnown RBP16.56■□□□□ 0.24
SMG9-201ENST00000270066 GZF1Q9H116 711 aaPredicted RBP16.56■□□□□ 0.24
SMG9-201ENST00000270066 E9PSI1 815 aa16.55■□□□□ 0.24
SMG9-201ENST00000270066 TEFQ10587 303 aa16.55■□□□□ 0.24
SMG9-201ENST00000270066 RRP7AQ9Y3A4 280 aaKnown RBP16.55■□□□□ 0.24
SMG9-201ENST00000270066 ANKRD50Q9ULJ7 1429 aa16.55■□□□□ 0.24
SMG9-201ENST00000270066 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
SMG9-201ENST00000270066 PSME1Q06323 249 aa16.53■□□□□ 0.24
SMG9-201ENST00000270066 PRG4Q92954 1404 aaPredicted RBP16.53■□□□□ 0.24
SMG9-201ENST00000270066 CLSTN1O94985 981 aa16.53■□□□□ 0.24
SMG9-201ENST00000270066 SLKQ9H2G2 1235 aaPredicted RBP16.53■□□□□ 0.24
SMG9-201ENST00000270066 ZNF644Q9H582 1327 aaPredicted RBP16.52■□□□□ 0.24
SMG9-201ENST00000270066 DIAPH1O60610 1272 aaKnown RBP16.52■□□□□ 0.24
SMG9-201ENST00000270066 TTC5Q8N0Z6 440 aa16.52■□□□□ 0.24
SMG9-201ENST00000270066 NGEFQ8N5V2 710 aa16.52■□□□□ 0.24
SMG9-201ENST00000270066 MFAP1P55081 439 aaKnown RBP16.52■□□□□ 0.24
SMG9-201ENST00000270066 PRKRIP1Q9H875 184 aaPredicted RBP16.52■□□□□ 0.23
SMG9-201ENST00000270066 HSP90B1P14625 803 aaKnown RBP16.51■□□□□ 0.23
SMG9-201ENST00000270066 HMGXB3Q12766 1538 aa16.51■□□□□ 0.23
SMG9-201ENST00000270066 MIA2Q96PC5 1412 aa16.51■□□□□ 0.23
SMG9-201ENST00000270066 DRC7Q8IY82 874 aa16.51■□□□□ 0.23
SMG9-201ENST00000270066 EFCAB5A4FU69 1503 aa16.5■□□□□ 0.23
SMG9-201ENST00000270066 CC2D2AQ9P2K1 1620 aa16.5■□□□□ 0.23
SMG9-201ENST00000270066 CHAF1AQ13111 956 aaPredicted RBP16.5■□□□□ 0.23
SMG9-201ENST00000270066 FRAT2O75474 233 aaPredicted RBP16.5■□□□□ 0.23
SMG9-201ENST00000270066 ZKSCAN2Q63HK3 967 aa16.5■□□□□ 0.23
SMG9-201ENST00000270066 CCDC34Q96HJ3 373 aa16.49■□□□□ 0.23
SMG9-201ENST00000270066 SYAP1Q96A49 352 aaPredicted RBP16.49■□□□□ 0.23
SMG9-201ENST00000270066 NEXNQ0ZGT2 675 aa16.48■□□□□ 0.23
SMG9-201ENST00000270066 PLEKHH2Q8IVE3 1493 aa16.48■□□□□ 0.23
SMG9-201ENST00000270066 RRBP1Q9P2E9 1410 aaKnown RBP16.48■□□□□ 0.23
SMG9-201ENST00000270066 ATF3P18847 181 aa16.47■□□□□ 0.23
SMG9-201ENST00000270066 CSPP1Q1MSJ5 1256 aa16.47■□□□□ 0.23
SMG9-201ENST00000270066 NESP48681 1621 aa16.45■□□□□ 0.22
SMG9-201ENST00000270066 ELL2O00472 640 aaPredicted RBP16.45■□□□□ 0.22
SMG9-201ENST00000270066 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
SMG9-201ENST00000270066 KIF3AQ9Y496 699 aa16.44■□□□□ 0.22
SMG9-201ENST00000270066 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
SMG9-201ENST00000270066 ZBED9Q6R2W3 1325 aa16.44■□□□□ 0.22
SMG9-201ENST00000270066 EHBP1L1Q8N3D4 1523 aa16.44■□□□□ 0.22
SMG9-201ENST00000270066 CENPQQ7L2Z9 268 aaPredicted RBP16.44■□□□□ 0.22
SMG9-201ENST00000270066 ST18O60284 1047 aa16.44■□□□□ 0.22
SMG9-201ENST00000270066 MEX3CQ5U5Q3 659 aaKnown RBP16.43■□□□□ 0.22
SMG9-201ENST00000270066 TPM4P67936 248 aa16.43■□□□□ 0.22
SMG9-201ENST00000270066 LRRFIP1Q32MZ4 808 aaKnown RBP16.43■□□□□ 0.22
SMG9-201ENST00000270066 CHMP4CQ96CF2 233 aa16.43■□□□□ 0.22
SMG9-201ENST00000270066 DDX58O95786 925 aaKnown RBP16.42■□□□□ 0.22
SMG9-201ENST00000270066 TOMM22Q9NS69 142 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms