RNA–Protein interactions for RNA: ENST00000261900.7

CCNT1-201, Transcript of cyclin T1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNT1, Length 6,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-201ENST00000261900 TDRD9Q8NDG6 1382 aaKnown RBP10.53□□□□□ -0.72
CCNT1-201ENST00000261900 DHX16O60231 1041 aaKnown RBP10.53□□□□□ -0.72
CCNT1-201ENST00000261900 HMGB2P26583 209 aaKnown RBP10.53□□□□□ -0.72
CCNT1-201ENST00000261900 AMER1Q5JTC6 1135 aaPredicted RBP10.53□□□□□ -0.72
CCNT1-201ENST00000261900 CHMP4CQ96CF2 233 aa10.52□□□□□ -0.73
CCNT1-201ENST00000261900 R3HCC1Q9Y3T6 440 aaKnown RBP10.52□□□□□ -0.73
CCNT1-201ENST00000261900 TRIM6-TRIM34B2RNG4 842 aa10.52□□□□□ -0.73
CCNT1-201ENST00000261900 ITPRIPQ8IWB1 547 aa10.52□□□□□ -0.73
CCNT1-201ENST00000261900 RAPGEF4Q8WZA2 1011 aa10.52□□□□□ -0.73
CCNT1-201ENST00000261900 SYNE3Q6ZMZ3 975 aa10.52□□□□□ -0.73
CCNT1-201ENST00000261900 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCNT1-201ENST00000261900 KTN1Q86UP2 1357 aaKnown RBP10.51□□□□□ -0.73
CCNT1-201ENST00000261900 SOGA1O94964 1423 aa10.51□□□□□ -0.73
CCNT1-201ENST00000261900 A0A0U1RQG5 324 aaPredicted RBP10.5□□□□□ -0.73
CCNT1-201ENST00000261900 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
CCNT1-201ENST00000261900 CPLX2Q6PUV4 134 aaKnown RBP10.49□□□□□ -0.73
CCNT1-201ENST00000261900 NGEFQ8N5V2 710 aa10.49□□□□□ -0.73
CCNT1-201ENST00000261900 HNRNPMP52272 730 aaKnown RBP eCLIP10.49□□□□□ -0.735e-7■■□□□ 14.2
CCNT1-201ENST00000261900 ROCK2O75116 1388 aaKnown RBP10.49□□□□□ -0.73
CCNT1-201ENST00000261900 CEP162Q5TB80 1403 aa10.49□□□□□ -0.73
CCNT1-201ENST00000261900 CREBRFQ8IUR6 639 aa10.49□□□□□ -0.73
CCNT1-201ENST00000261900 TRAK1Q9UPV9 953 aa10.49□□□□□ -0.73
CCNT1-201ENST00000261900 RWDD1Q9H446 243 aaPredicted RBP10.48□□□□□ -0.73
CCNT1-201ENST00000261900 SIN3AQ96ST3 1273 aa10.48□□□□□ -0.73
CCNT1-201ENST00000261900 WDHD1O75717 1129 aaPredicted RBP10.48□□□□□ -0.73
CCNT1-201ENST00000261900 ERICH6BQ5W0A0 696 aa10.48□□□□□ -0.73
CCNT1-201ENST00000261900 DDX58O95786 925 aaKnown RBP10.47□□□□□ -0.73
CCNT1-201ENST00000261900 SF3A1Q15459 793 aaKnown RBP10.47□□□□□ -0.73
CCNT1-201ENST00000261900 NLRP2Q9NX02 1062 aa10.47□□□□□ -0.73
CCNT1-201ENST00000261900 PROSER2Q86WR7 435 aaPredicted RBP10.46□□□□□ -0.73
CCNT1-201ENST00000261900 PAF1Q8N7H5 531 aa10.45□□□□□ -0.74
CCNT1-201ENST00000261900 NUTM2BA6NNL0 878 aaPredicted RBP10.45□□□□□ -0.74
CCNT1-201ENST00000261900 NUTM2EB1AL46 878 aaPredicted RBP10.45□□□□□ -0.74
CCNT1-201ENST00000261900 NUTM2AQ8IVF1 878 aaPredicted RBP10.45□□□□□ -0.74
CCNT1-201ENST00000261900 WWC2Q6AWC2 1192 aa10.45□□□□□ -0.74
CCNT1-201ENST00000261900 TPM3P06753 285 aa10.45□□□□□ -0.74
CCNT1-201ENST00000261900 C9orf78Q9NZ63 289 aaPredicted RBP10.44□□□□□ -0.74
CCNT1-201ENST00000261900 PTPRGP23470 1445 aa10.44□□□□□ -0.74
CCNT1-201ENST00000261900 PES1O00541 588 aaKnown RBP10.44□□□□□ -0.74
CCNT1-201ENST00000261900 CCDC47Q96A33 483 aaKnown RBP10.44□□□□□ -0.74
CCNT1-201ENST00000261900 APPP05067 770 aa10.43□□□□□ -0.74
CCNT1-201ENST00000261900 PIP4K2BP78356 416 aa10.43□□□□□ -0.74
CCNT1-201ENST00000261900 UACAQ9BZF9 1416 aa10.43□□□□□ -0.74
CCNT1-201ENST00000261900 CSPP1Q1MSJ5 1256 aa10.43□□□□□ -0.74
CCNT1-201ENST00000261900 TIMELESSQ9UNS1 1208 aa10.43□□□□□ -0.74
CCNT1-201ENST00000261900 SUPT16HQ9Y5B9 1047 aaKnown RBP10.43□□□□□ -0.74
CCNT1-201ENST00000261900 USP35Q9P2H5 1018 aa10.43□□□□□ -0.74
CCNT1-201ENST00000261900 EVC2Q86UK5 1308 aa10.43□□□□□ -0.74
CCNT1-201ENST00000261900 TPM2P07951 284 aa10.43□□□□□ -0.74
CCNT1-201ENST00000261900 TPD52L1Q16890 204 aaPredicted RBP10.43□□□□□ -0.74
CCNT1-201ENST00000261900 TSR1Q2NL82 804 aaKnown RBP10.43□□□□□ -0.74
CCNT1-201ENST00000261900 B4GALNT3Q6L9W6 998 aa10.43□□□□□ -0.74
CCNT1-201ENST00000261900 SYAP1Q96A49 352 aaPredicted RBP10.43□□□□□ -0.74
CCNT1-201ENST00000261900 FMN1Q68DA7 1419 aa10.43□□□□□ -0.74
CCNT1-201ENST00000261900 KIF16BQ96L93 1317 aa10.42□□□□□ -0.74
CCNT1-201ENST00000261900 EIF2S2P20042 333 aaKnown RBP10.42□□□□□ -0.74
CCNT1-201ENST00000261900 TNIKQ9UKE5 1360 aa10.42□□□□□ -0.74
CCNT1-201ENST00000261900 IKQ13123 557 aaPredicted RBP10.41□□□□□ -0.74
CCNT1-201ENST00000261900 MINK1Q8N4C8 1332 aaPredicted RBP10.41□□□□□ -0.74
CCNT1-201ENST00000261900 TRDNQ13061 729 aa10.41□□□□□ -0.74
CCNT1-201ENST00000261900 RALBP1Q15311 655 aa10.41□□□□□ -0.74
CCNT1-201ENST00000261900 GPRASP1Q5JY77 1395 aa10.41□□□□□ -0.74
CCNT1-201ENST00000261900 ARHGAP35Q9NRY4 1499 aa10.4□□□□□ -0.74
CCNT1-201ENST00000261900 MIER1Q8N108 512 aa10.4□□□□□ -0.74
CCNT1-201ENST00000261900 TRIM29Q14134 588 aa10.4□□□□□ -0.74
CCNT1-201ENST00000261900 PPP4R2Q9NY27 417 aa10.4□□□□□ -0.74
CCNT1-201ENST00000261900 PDE3BQ13370 1112 aa10.4□□□□□ -0.75
CCNT1-201ENST00000261900 ERICH2A1L162 156 aa10.39□□□□□ -0.75
CCNT1-201ENST00000261900 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.39□□□□□ -0.752e-6■■■■■ 75.7
CCNT1-201ENST00000261900 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
CCNT1-201ENST00000261900 GBP4Q96PP9 640 aa10.39□□□□□ -0.75
CCNT1-201ENST00000261900 PMFBP1Q8TBY8 1022 aa10.38□□□□□ -0.75
CCNT1-201ENST00000261900 PTMSP20962 102 aa10.38□□□□□ -0.75
CCNT1-201ENST00000261900 PAXIP1Q6ZW49 1069 aaPredicted RBP10.38□□□□□ -0.75
CCNT1-201ENST00000261900 STRN4Q9NRL3 753 aa10.38□□□□□ -0.75
CCNT1-201ENST00000261900 TMEM132AQ24JP5 1023 aa10.38□□□□□ -0.75
CCNT1-201ENST00000261900 MPHOSPH9Q99550 1183 aa10.38□□□□□ -0.75
CCNT1-201ENST00000261900 H3BQV1 296 aa10.38□□□□□ -0.75
CCNT1-201ENST00000261900 IFFO2Q5TF58 517 aa10.38□□□□□ -0.75
CCNT1-201ENST00000261900 CGNL1Q0VF96 1302 aa10.38□□□□□ -0.75
CCNT1-201ENST00000261900 BAZ1AQ9NRL2 1556 aaPredicted RBP10.38□□□□□ -0.75
CCNT1-201ENST00000261900 CPLX1O14810 134 aa10.37□□□□□ -0.75
CCNT1-201ENST00000261900 MSNP26038 577 aaKnown RBP10.37□□□□□ -0.75
CCNT1-201ENST00000261900 THEMISQ8N1K5 641 aaPredicted RBP10.37□□□□□ -0.75
CCNT1-201ENST00000261900 FBXO3Q9UK99 471 aa10.36□□□□□ -0.75
CCNT1-201ENST00000261900 TPM1P09493 284 aa10.36□□□□□ -0.75
CCNT1-201ENST00000261900 DIAPH3Q9NSV4 1193 aa10.36□□□□□ -0.75
CCNT1-201ENST00000261900 CCDC180Q9P1Z9 1646 aa10.36□□□□□ -0.75
CCNT1-201ENST00000261900 CCDC27Q2M243 656 aa10.36□□□□□ -0.75
CCNT1-201ENST00000261900 G3BP1Q13283 466 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCNT1-201ENST00000261900 RUFY2Q8WXA3 655 aa10.36□□□□□ -0.75
CCNT1-201ENST00000261900 CCDC18Q5T9S5 1454 aa10.36□□□□□ -0.75
CCNT1-201ENST00000261900 RBM42Q9BTD8 480 aaKnown RBP10.36□□□□□ -0.75
CCNT1-201ENST00000261900 TCERG1O14776 1098 aaKnown RBP10.35□□□□□ -0.75
CCNT1-201ENST00000261900 ELL2O00472 640 aaPredicted RBP10.35□□□□□ -0.75
CCNT1-201ENST00000261900 SPRYD3Q8NCJ5 442 aa10.35□□□□□ -0.75
CCNT1-201ENST00000261900 HSPA5P11021 654 aaKnown RBP10.35□□□□□ -0.75
CCNT1-201ENST00000261900 IFIT2P09913 472 aaKnown RBP10.35□□□□□ -0.75
CCNT1-201ENST00000261900 NLRP6P59044 892 aa10.35□□□□□ -0.75
CCNT1-201ENST00000261900 TXNDC2Q86VQ3 553 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms