RNA–Protein interactions for RNA: ENST00000261833.11

CIT-201, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIT, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-201ENST00000261833 ST18O60284 1047 aa12.2□□□□□ -0.46
CIT-201ENST00000261833 KIAA1211Q6ZU35 1233 aa12.2□□□□□ -0.46
CIT-201ENST00000261833 GOLGA6L1Q8N7Z2 621 aa12.2□□□□□ -0.46
CIT-201ENST00000261833 CC2D2AQ9P2K1 1620 aa12.2□□□□□ -0.46
CIT-201ENST00000261833 UACAQ9BZF9 1416 aa12.19□□□□□ -0.46
CIT-201ENST00000261833 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
CIT-201ENST00000261833 VIRMAQ69YN4 1812 aaKnown RBP12.19□□□□□ -0.46
CIT-201ENST00000261833 USP47Q96K76 1375 aa12.19□□□□□ -0.46
CIT-201ENST00000261833 OS9Q13438 667 aaPredicted RBP12.19□□□□□ -0.46
CIT-201ENST00000261833 ITPRIPQ8IWB1 547 aa12.18□□□□□ -0.46
CIT-201ENST00000261833 KCNH8Q96L42 1107 aa12.18□□□□□ -0.46
CIT-201ENST00000261833 MAP7D2Q96T17 732 aa12.18□□□□□ -0.46
CIT-201ENST00000261833 CENPJQ9HC77 1338 aaPredicted RBP12.18□□□□□ -0.46
CIT-201ENST00000261833 RRBP1Q9P2E9 1410 aaKnown RBP12.17□□□□□ -0.46
CIT-201ENST00000261833 MFAP1P55081 439 aaKnown RBP12.17□□□□□ -0.46
CIT-201ENST00000261833 MORC1Q86VD1 984 aa12.16□□□□□ -0.46
CIT-201ENST00000261833 ERCC6Q03468 1493 aa12.16□□□□□ -0.46
CIT-201ENST00000261833 VSIG10Q8N0Z9 540 aa12.16□□□□□ -0.46
CIT-201ENST00000261833 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
CIT-201ENST00000261833 U2SURPO15042 1029 aaKnown RBP12.16□□□□□ -0.46
CIT-201ENST00000261833 PCF11O94913 1555 aaKnown RBP12.15□□□□□ -0.46
CIT-201ENST00000261833 GPATCH3Q96I76 525 aa12.15□□□□□ -0.46
CIT-201ENST00000261833 CCDC9Q9Y3X0 531 aaKnown RBP12.15□□□□□ -0.46
CIT-201ENST00000261833 ARID3AQ99856 593 aa12.15□□□□□ -0.46
CIT-201ENST00000261833 TMX4Q9H1E5 349 aaPredicted RBP12.15□□□□□ -0.47
CIT-201ENST00000261833 PLEKHH2Q8IVE3 1493 aa12.15□□□□□ -0.47
CIT-201ENST00000261833 GCC2Q8IWJ2 1684 aa12.14□□□□□ -0.47
CIT-201ENST00000261833 CARMIL2Q6F5E8 1435 aa12.14□□□□□ -0.47
CIT-201ENST00000261833 SETQ01105 290 aaPredicted RBP12.13□□□□□ -0.47
CIT-201ENST00000261833 AAMPQ13685 434 aa12.13□□□□□ -0.47
CIT-201ENST00000261833 TPM2P07951 284 aa12.13□□□□□ -0.47
CIT-201ENST00000261833 KIF1BO60333 1816 aa12.13□□□□□ -0.47
CIT-201ENST00000261833 CCDC144AA2RUR9 1427 aa12.13□□□□□ -0.47
CIT-201ENST00000261833 PRKRIP1Q9H875 184 aaPredicted RBP12.12□□□□□ -0.47
CIT-201ENST00000261833 FHOD3Q2V2M9 1422 aa12.12□□□□□ -0.47
CIT-201ENST00000261833 FAM43AQ8N2R8 423 aa12.12□□□□□ -0.47
CIT-201ENST00000261833 ATP6V1DQ9Y5K8 247 aa12.12□□□□□ -0.47
CIT-201ENST00000261833 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
CIT-201ENST00000261833 NUP155O75694 1391 aa12.11□□□□□ -0.47
CIT-201ENST00000261833 PKD2Q13563 968 aa12.11□□□□□ -0.47
CIT-201ENST00000261833 FGD6Q6ZV73 1430 aa12.11□□□□□ -0.47
CIT-201ENST00000261833 GNL2Q13823 731 aaKnown RBP12.11□□□□□ -0.47
CIT-201ENST00000261833 ANO8Q9HCE9 1232 aaPredicted RBP12.1□□□□□ -0.47
CIT-201ENST00000261833 SMC4Q9NTJ3 1288 aa12.1□□□□□ -0.47
CIT-201ENST00000261833 MIA2Q96PC5 1412 aa12.1□□□□□ -0.47
CIT-201ENST00000261833 E9PSI1 815 aa12.1□□□□□ -0.47
CIT-201ENST00000261833 FOXD1Q16676 465 aa12.1□□□□□ -0.47
CIT-201ENST00000261833 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
CIT-201ENST00000261833 POGKQ9P215 609 aa12.09□□□□□ -0.47
CIT-201ENST00000261833 ISY1Q9ULR0 285 aaKnown RBP12.09□□□□□ -0.47
CIT-201ENST00000261833 NAP1L2Q9ULW6 460 aaPredicted RBP12.09□□□□□ -0.47
CIT-201ENST00000261833 BRD4O60885 1362 aaPredicted RBP12.09□□□□□ -0.47
CIT-201ENST00000261833 MYOM3Q5VTT5 1437 aa12.09□□□□□ -0.47
CIT-201ENST00000261833 ROCK1Q13464 1354 aa12.09□□□□□ -0.47
CIT-201ENST00000261833 HMMRO75330 724 aa12.08□□□□□ -0.48
CIT-201ENST00000261833 TEX35Q5T0J7 233 aa12.08□□□□□ -0.48
CIT-201ENST00000261833 ARAP1Q96P48 1450 aa12.08□□□□□ -0.48
CIT-201ENST00000261833 ZNF771Q7L3S4 317 aaPredicted RBP12.08□□□□□ -0.48
CIT-201ENST00000261833 CCDC34Q96HJ3 373 aa12.08□□□□□ -0.48
CIT-201ENST00000261833 NFKBIBQ15653 356 aa12.07□□□□□ -0.48
CIT-201ENST00000261833 CCDC7Q96M83 1385 aa12.07□□□□□ -0.48
CIT-201ENST00000261833 NINLQ9Y2I6 1382 aa12.07□□□□□ -0.48
CIT-201ENST00000261833 L3MBTL2Q969R5 705 aa12.07□□□□□ -0.48
CIT-201ENST00000261833 FBXO3Q9UK99 471 aa12.07□□□□□ -0.48
CIT-201ENST00000261833 SMG6Q86US8 1419 aaKnown RBP12.07□□□□□ -0.48
CIT-201ENST00000261833 TCHHQ07283 1943 aa12.07□□□□□ -0.48
CIT-201ENST00000261833 CRBNQ96SW2 442 aa12.07□□□□□ -0.48
CIT-201ENST00000261833 DDX49Q9Y6V7 483 aaKnown RBP12.07□□□□□ -0.48
CIT-201ENST00000261833 GPS2Q13227 327 aa12.06□□□□□ -0.48
CIT-201ENST00000261833 PKNOX2Q96KN3 472 aa12.06□□□□□ -0.48
CIT-201ENST00000261833 MYO5CQ9NQX4 1742 aa12.06□□□□□ -0.48
CIT-201ENST00000261833 CHMP4AQ9BY43 222 aa12.06□□□□□ -0.48
CIT-201ENST00000261833 CASKIN1Q8WXD9 1431 aa12.05□□□□□ -0.48
CIT-201ENST00000261833 RRP9O43818 475 aaKnown RBP12.05□□□□□ -0.48
CIT-201ENST00000261833 MRE11P49959 708 aa12.05□□□□□ -0.48
CIT-201ENST00000261833 NESP48681 1621 aa12.05□□□□□ -0.48
CIT-201ENST00000261833 MAP3K1Q13233 1512 aa12.05□□□□□ -0.48
CIT-201ENST00000261833 RTF1Q92541 710 aaKnown RBP12.05□□□□□ -0.48
CIT-201ENST00000261833 SPAG9O60271 1321 aaKnown RBP12.04□□□□□ -0.48
CIT-201ENST00000261833 CHMP5Q9NZZ3 219 aa12.04□□□□□ -0.48
CIT-201ENST00000261833 EIF2AK4Q9P2K8 1649 aaKnown RBP12.04□□□□□ -0.48
CIT-201ENST00000261833 NOC3LQ8WTT2 800 aaKnown RBP12.04□□□□□ -0.48
CIT-201ENST00000261833 PBRM1Q86U86 1689 aa12.04□□□□□ -0.48
CIT-201ENST00000261833 NASPP49321 788 aaPredicted RBP12.04□□□□□ -0.48
CIT-201ENST00000261833 KIF14Q15058 1648 aa12.03□□□□□ -0.48
CIT-201ENST00000261833 KIF3AQ9Y496 699 aa12.03□□□□□ -0.48
CIT-201ENST00000261833 MLECQ14165 292 aa12.03□□□□□ -0.48
CIT-201ENST00000261833 GOLGA6L19H0YKK7 550 aa12.03□□□□□ -0.48
CIT-201ENST00000261833 LMOD3Q0VAK6 560 aa12.03□□□□□ -0.48
CIT-201ENST00000261833 NOM1Q5C9Z4 860 aaKnown RBP12.03□□□□□ -0.48
CIT-201ENST00000261833 TRIM6-TRIM34B2RNG4 842 aa12.03□□□□□ -0.48
CIT-201ENST00000261833 PDS5BQ9NTI5 1447 aa12.03□□□□□ -0.48
CIT-201ENST00000261833 CCDC39Q9UFE4 941 aa12.03□□□□□ -0.48
CIT-201ENST00000261833 SRPK2P78362 688 aaKnown RBP12.02□□□□□ -0.48
CIT-201ENST00000261833 AKNAQ7Z591 1439 aa12.02□□□□□ -0.48
CIT-201ENST00000261833 SCAPERQ9BY12 1400 aa12.02□□□□□ -0.48
CIT-201ENST00000261833 PDE4CQ08493 712 aa12.02□□□□□ -0.49
CIT-201ENST00000261833 MEX3CQ5U5Q3 659 aaKnown RBP12.02□□□□□ -0.49
CIT-201ENST00000261833 HDGFL2Q7Z4V5 671 aaPredicted RBP12.02□□□□□ -0.49
CIT-201ENST00000261833 EXOC6Q8TAG9 804 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms