RNA–Protein interactions for RNA: ENST00000261205.8

SYT1-201, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 4,808 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-201ENST00000261205 KIF14Q15058 1648 aa20.63■□□□□ 0.89
SYT1-201ENST00000261205 CCDC141Q6ZP82 1450 aa20.63■□□□□ 0.89
SYT1-201ENST00000261205 RTF1Q92541 710 aaKnown RBP20.63■□□□□ 0.89
SYT1-201ENST00000261205 NLRP13Q86W25 1043 aa20.62■□□□□ 0.89
SYT1-201ENST00000261205 USP47Q96K76 1375 aa20.62■□□□□ 0.89
SYT1-201ENST00000261205 LAS1LQ9Y4W2 734 aaKnown RBP20.61■□□□□ 0.89
SYT1-201ENST00000261205 THOC2Q8NI27 1593 aaKnown RBP20.6■□□□□ 0.89
SYT1-201ENST00000261205 KIAA1107Q9UPP5 1409 aa20.59■□□□□ 0.89
SYT1-201ENST00000261205 WDR97A6NE52 1622 aa20.59■□□□□ 0.89
SYT1-201ENST00000261205 SOX12O15370 315 aa20.58■□□□□ 0.89
SYT1-201ENST00000261205 U2AF1L5P0DN76 240 aaPredicted RBP20.57■□□□□ 0.88
SYT1-201ENST00000261205 U2AF1Q01081 240 aaKnown RBP eCLIP20.57■□□□□ 0.88
SYT1-201ENST00000261205 ARHGEF11O15085 1522 aa20.57■□□□□ 0.88
SYT1-201ENST00000261205 ADAMTS12P58397 1594 aa20.56■□□□□ 0.88
SYT1-201ENST00000261205 CGNL1Q0VF96 1302 aa20.56■□□□□ 0.88
SYT1-201ENST00000261205 CENPJQ9HC77 1338 aaPredicted RBP20.56■□□□□ 0.88
SYT1-201ENST00000261205 RPGRIP1LQ68CZ1 1315 aa20.55■□□□□ 0.88
SYT1-201ENST00000261205 THEMISQ8N1K5 641 aaPredicted RBP20.55■□□□□ 0.88
SYT1-201ENST00000261205 RAPGEF3O95398 923 aa20.54■□□□□ 0.88
SYT1-201ENST00000261205 CSB-PGBD3P0DP91 1061 aa20.54■□□□□ 0.88
SYT1-201ENST00000261205 UGGT2Q9NYU1 1516 aa20.54■□□□□ 0.88
SYT1-201ENST00000261205 HSP90AA1P07900 732 aaKnown RBP20.53■□□□□ 0.88
SYT1-201ENST00000261205 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
SYT1-201ENST00000261205 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
SYT1-201ENST00000261205 LMOD3Q0VAK6 560 aa20.52■□□□□ 0.88
SYT1-201ENST00000261205 ADGRL1O94910 1474 aa20.52■□□□□ 0.88
SYT1-201ENST00000261205 CAMSAP2Q08AD1 1489 aa20.51■□□□□ 0.87
SYT1-201ENST00000261205 PANK3Q9H999 370 aa20.5■□□□□ 0.87
SYT1-201ENST00000261205 AMPHP49418 695 aa20.49■□□□□ 0.87
SYT1-201ENST00000261205 COG3Q96JB2 828 aa20.49■□□□□ 0.87
SYT1-201ENST00000261205 MYBBP1AQ9BQG0 1328 aaKnown RBP20.49■□□□□ 0.87
SYT1-201ENST00000261205 ARXQ96QS3 562 aa20.48■□□□□ 0.87
SYT1-201ENST00000261205 IPO8O15397 1037 aaKnown RBP20.48■□□□□ 0.87
SYT1-201ENST00000261205 MINK1Q8N4C8 1332 aaPredicted RBP20.47■□□□□ 0.87
SYT1-201ENST00000261205 SUPT16HQ9Y5B9 1047 aaKnown RBP20.47■□□□□ 0.87
SYT1-201ENST00000261205 ANKRD30BQ9BXX2 1392 aa20.47■□□□□ 0.87
SYT1-201ENST00000261205 DENND4BO75064 1496 aaPredicted RBP20.46■□□□□ 0.87
SYT1-201ENST00000261205 PDE3BQ13370 1112 aa20.46■□□□□ 0.87
SYT1-201ENST00000261205 RAPGEF6Q8TEU7 1601 aa20.46■□□□□ 0.87
SYT1-201ENST00000261205 EIF4G3O43432 1585 aaKnown RBP20.45■□□□□ 0.86
SYT1-201ENST00000261205 NUP160Q12769 1436 aa20.45■□□□□ 0.86
SYT1-201ENST00000261205 NAIPQ13075 1403 aa20.45■□□□□ 0.86
SYT1-201ENST00000261205 TXNDC2Q86VQ3 553 aa20.45■□□□□ 0.86
SYT1-201ENST00000261205 PTPN23Q9H3S7 1636 aa20.45■□□□□ 0.86
SYT1-201ENST00000261205 NGEFQ8N5V2 710 aa20.44■□□□□ 0.86
SYT1-201ENST00000261205 AKNAQ7Z591 1439 aa20.44■□□□□ 0.86
SYT1-201ENST00000261205 FRAT1Q92837 279 aaPredicted RBP20.44■□□□□ 0.86
SYT1-201ENST00000261205 ABCC5O15440 1437 aa20.43■□□□□ 0.86
SYT1-201ENST00000261205 FANCAO15360 1455 aa20.43■□□□□ 0.86
SYT1-201ENST00000261205 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.42■□□□□ 0.86
SYT1-201ENST00000261205 PPP4R2Q9NY27 417 aa20.42■□□□□ 0.86
SYT1-201ENST00000261205 IRX6P78412 446 aaPredicted RBP20.42■□□□□ 0.86
SYT1-201ENST00000261205 ATP10BO94823 1461 aa20.41■□□□□ 0.86
SYT1-201ENST00000261205 TEX14Q8IWB6 1497 aa20.41■□□□□ 0.86
SYT1-201ENST00000261205 CTTNBP2Q8WZ74 1663 aa20.41■□□□□ 0.86
SYT1-201ENST00000261205 CASC1Q6TDU7 716 aa20.4■□□□□ 0.86
SYT1-201ENST00000261205 ATF3P18847 181 aa20.39■□□□□ 0.85
SYT1-201ENST00000261205 ERICH6BQ5W0A0 696 aa20.39■□□□□ 0.85
SYT1-201ENST00000261205 NUTM2FA1L443 756 aa20.38■□□□□ 0.85
SYT1-201ENST00000261205 PLCH2O75038 1416 aa20.38■□□□□ 0.85
SYT1-201ENST00000261205 HDAC5Q9UQL6 1122 aa20.38■□□□□ 0.85
SYT1-201ENST00000261205 KIAA0556O60303 1618 aa20.38■□□□□ 0.85
SYT1-201ENST00000261205 AEBP2Q6ZN18 517 aaPredicted RBP20.37■□□□□ 0.85
SYT1-201ENST00000261205 NCOA1Q15788 1441 aa20.37■□□□□ 0.85
SYT1-201ENST00000261205 PRKRIP1Q9H875 184 aaPredicted RBP20.36■□□□□ 0.85
SYT1-201ENST00000261205 ASXL2Q76L83 1435 aa20.36■□□□□ 0.85
SYT1-201ENST00000261205 ANKLE2Q86XL3 938 aa20.36■□□□□ 0.85
SYT1-201ENST00000261205 GOLGA2Q08379 1002 aa20.36■□□□□ 0.85
SYT1-201ENST00000261205 GPATCH8Q9UKJ3 1502 aaKnown RBP20.35■□□□□ 0.85
SYT1-201ENST00000261205 NPHP1O15259 732 aa20.35■□□□□ 0.85
SYT1-201ENST00000261205 PSME1Q06323 249 aa20.35■□□□□ 0.85
SYT1-201ENST00000261205 NUP153P49790 1475 aaKnown RBP20.35■□□□□ 0.85
SYT1-201ENST00000261205 CFAP70Q5T0N1 1121 aa20.35■□□□□ 0.85
SYT1-201ENST00000261205 CCDC7Q96M83 1385 aa20.34■□□□□ 0.85
SYT1-201ENST00000261205 WDR7Q9Y4E6 1490 aa20.33■□□□□ 0.85
SYT1-201ENST00000261205 SENP3-EIF4A1A0A087X0R7 540 aa20.33■□□□□ 0.85
SYT1-201ENST00000261205 DHX29Q7Z478 1369 aaKnown RBP20.33■□□□□ 0.84
SYT1-201ENST00000261205 ABCA5Q8WWZ7 1642 aa20.33■□□□□ 0.84
SYT1-201ENST00000261205 STK31Q9BXU1 1019 aa20.32■□□□□ 0.84
SYT1-201ENST00000261205 WASHC2AQ641Q2 1341 aa20.32■□□□□ 0.84
SYT1-201ENST00000261205 CFAP44Q96MT7 982 aa20.31■□□□□ 0.84
SYT1-201ENST00000261205 ERBINQ96RT1 1412 aa20.3■□□□□ 0.84
SYT1-201ENST00000261205 CCDC9Q9Y3X0 531 aaKnown RBP20.29■□□□□ 0.84
SYT1-201ENST00000261205 RCAN3Q9UKA8 241 aa20.29■□□□□ 0.84
SYT1-201ENST00000261205 OS9Q13438 667 aaPredicted RBP20.29■□□□□ 0.84
SYT1-201ENST00000261205 TMEM132EQ6IEE7 984 aa20.29■□□□□ 0.84
SYT1-201ENST00000261205 BECN1Q14457 450 aa20.28■□□□□ 0.84
SYT1-201ENST00000261205 KIF7Q2M1P5 1343 aa20.28■□□□□ 0.84
SYT1-201ENST00000261205 DDRGK1Q96HY6 314 aa20.28■□□□□ 0.84
SYT1-201ENST00000261205 ITSN2Q9NZM3 1697 aa20.27■□□□□ 0.83
SYT1-201ENST00000261205 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
SYT1-201ENST00000261205 DIAPH1O60610 1272 aaKnown RBP20.26■□□□□ 0.83
SYT1-201ENST00000261205 GPRASP1Q5JY77 1395 aa20.26■□□□□ 0.83
SYT1-201ENST00000261205 PROSER2Q86WR7 435 aaPredicted RBP20.26■□□□□ 0.83
SYT1-201ENST00000261205 ABCC2Q92887 1545 aa20.25■□□□□ 0.83
SYT1-201ENST00000261205 ZNF692Q9BU19 519 aaPredicted RBP20.25■□□□□ 0.83
SYT1-201ENST00000261205 LTV1Q96GA3 475 aaPredicted RBP20.23■□□□□ 0.83
SYT1-201ENST00000261205 EVA1CP58658 441 aa20.23■□□□□ 0.83
SYT1-201ENST00000261205 ZNF518AQ6AHZ1 1483 aa20.23■□□□□ 0.83
SYT1-201ENST00000261205 C1orf141Q5JVX7 400 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms