RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 SPAG9O60271 1321 aaKnown RBP19.42■□□□□ 0.7
RIPK1-201ENST00000259808 PLCB2Q00722 1185 aa19.41■□□□□ 0.7
RIPK1-201ENST00000259808 CCDC144AA2RUR9 1427 aa19.41■□□□□ 0.7
RIPK1-201ENST00000259808 SMC4Q9NTJ3 1288 aa19.41■□□□□ 0.7
RIPK1-201ENST00000259808 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.4■□□□□ 0.72e-6■■□□□ 13.1
RIPK1-201ENST00000259808 KANK1Q14678 1352 aa19.39■□□□□ 0.7
RIPK1-201ENST00000259808 AFAP1Q8N556 730 aa19.39■□□□□ 0.69
RIPK1-201ENST00000259808 FANCIQ9NVI1 1328 aa19.39■□□□□ 0.69
RIPK1-201ENST00000259808 GOLGA6L22H0YM25 854 aa19.38■□□□□ 0.69
RIPK1-201ENST00000259808 CNTLNQ9NXG0 1405 aa19.38■□□□□ 0.69
RIPK1-201ENST00000259808 ADAMTS8Q9UP79 889 aa19.38■□□□□ 0.69
RIPK1-201ENST00000259808 CENPJQ9HC77 1338 aaPredicted RBP19.38■□□□□ 0.69
RIPK1-201ENST00000259808 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
RIPK1-201ENST00000259808 PDE3BQ13370 1112 aa19.36■□□□□ 0.69
RIPK1-201ENST00000259808 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
RIPK1-201ENST00000259808 TRHP20396 242 aaPredicted RBP19.35■□□□□ 0.69
RIPK1-201ENST00000259808 HSCBQ8IWL3 235 aa19.35■□□□□ 0.69
RIPK1-201ENST00000259808 CASKIN1Q8WXD9 1431 aa19.35■□□□□ 0.69
RIPK1-201ENST00000259808 MSH5O43196 834 aa19.35■□□□□ 0.69
RIPK1-201ENST00000259808 PRG4Q92954 1404 aaPredicted RBP19.34■□□□□ 0.69
RIPK1-201ENST00000259808 PTMAP06454 111 aaKnown RBP19.32■□□□□ 0.68
RIPK1-201ENST00000259808 TMEM132EQ6IEE7 984 aa19.31■□□□□ 0.68
RIPK1-201ENST00000259808 PANK1Q8TE04 598 aa19.31■□□□□ 0.68
RIPK1-201ENST00000259808 RWDD1Q9H446 243 aaPredicted RBP19.31■□□□□ 0.68
RIPK1-201ENST00000259808 WASHC2CQ9Y4E1 1318 aa19.3■□□□□ 0.68
RIPK1-201ENST00000259808 ARID3AQ99856 593 aa19.29■□□□□ 0.68
RIPK1-201ENST00000259808 PRDM2Q13029 1718 aa19.29■□□□□ 0.68
RIPK1-201ENST00000259808 NOL8Q76FK4 1167 aaKnown RBP19.29■□□□□ 0.68
RIPK1-201ENST00000259808 PNISRQ8TF01 805 aaKnown RBP19.28■□□□□ 0.68
RIPK1-201ENST00000259808 ANKRD50Q9ULJ7 1429 aa19.28■□□□□ 0.68
RIPK1-201ENST00000259808 GRIN2BQ13224 1484 aa19.27■□□□□ 0.68
RIPK1-201ENST00000259808 FOXD4L5Q5VV16 416 aaPredicted RBP19.27■□□□□ 0.67
RIPK1-201ENST00000259808 FOXD4L4Q8WXT5 416 aaPredicted RBP19.27■□□□□ 0.67
RIPK1-201ENST00000259808 DNTTIP2Q5QJE6 756 aaKnown RBP19.26■□□□□ 0.67
RIPK1-201ENST00000259808 MINK1Q8N4C8 1332 aaPredicted RBP19.26■□□□□ 0.67
RIPK1-201ENST00000259808 FAM161AQ3B820 660 aa19.25■□□□□ 0.67
RIPK1-201ENST00000259808 CDK13Q14004 1512 aaKnown RBP19.25■□□□□ 0.67
RIPK1-201ENST00000259808 OS9Q13438 667 aaPredicted RBP19.25■□□□□ 0.67
RIPK1-201ENST00000259808 SLC4A10Q6U841 1118 aa19.25■□□□□ 0.67
RIPK1-201ENST00000259808 CFAP70Q5T0N1 1121 aa19.25■□□□□ 0.67
RIPK1-201ENST00000259808 MS4A1P11836 297 aa19.24■□□□□ 0.67
RIPK1-201ENST00000259808 HDGFL2Q7Z4V5 671 aaPredicted RBP19.24■□□□□ 0.67
RIPK1-201ENST00000259808 CENPQQ7L2Z9 268 aaPredicted RBP19.24■□□□□ 0.67
RIPK1-201ENST00000259808 NAIPQ13075 1403 aa19.23■□□□□ 0.67
RIPK1-201ENST00000259808 TIAM1Q13009 1591 aa19.23■□□□□ 0.67
RIPK1-201ENST00000259808 CASC1Q6TDU7 716 aa19.23■□□□□ 0.67
RIPK1-201ENST00000259808 ZNF608Q9ULD9 1512 aaPredicted RBP19.22■□□□□ 0.67
RIPK1-201ENST00000259808 BCAR3O75815 825 aa19.21■□□□□ 0.67
RIPK1-201ENST00000259808 SNAPC4Q5SXM2 1469 aa19.21■□□□□ 0.67
RIPK1-201ENST00000259808 FOXD4L6Q3SYB3 417 aaPredicted RBP19.21■□□□□ 0.67
RIPK1-201ENST00000259808 FOXD4L3Q6VB84 417 aaPredicted RBP19.21■□□□□ 0.67
RIPK1-201ENST00000259808 GLIPR1L2Q4G1C9 344 aa19.21■□□□□ 0.67
RIPK1-201ENST00000259808 HFM1A2PYH4 1435 aa19.2■□□□□ 0.66
RIPK1-201ENST00000259808 IPO8O15397 1037 aaKnown RBP19.2■□□□□ 0.66
RIPK1-201ENST00000259808 LTV1Q96GA3 475 aaPredicted RBP19.2■□□□□ 0.66
RIPK1-201ENST00000259808 URB2Q14146 1524 aaKnown RBP19.2■□□□□ 0.66
RIPK1-201ENST00000259808 RSPH4AQ5TD94 716 aa19.2■□□□□ 0.66
RIPK1-201ENST00000259808 PMFBP1Q8TBY8 1022 aa19.19■□□□□ 0.66
RIPK1-201ENST00000259808 GGNBP2Q9H3C7 697 aa19.19■□□□□ 0.66
RIPK1-201ENST00000259808 KCNJ4P48050 445 aa19.18■□□□□ 0.66
RIPK1-201ENST00000259808 PEG3Q9GZU2 1588 aa19.17■□□□□ 0.66
RIPK1-201ENST00000259808 OSCARQ8IYS5 282 aa19.17■□□□□ 0.66
RIPK1-201ENST00000259808 NAP1L2Q9ULW6 460 aaPredicted RBP19.17■□□□□ 0.66
RIPK1-201ENST00000259808 FYCO1Q9BQS8 1478 aa19.17■□□□□ 0.66
RIPK1-201ENST00000259808 E9PSI1 815 aa19.17■□□□□ 0.66
RIPK1-201ENST00000259808 GSE1Q14687 1217 aa19.17■□□□□ 0.66
RIPK1-201ENST00000259808 ANKRD45Q5TZF3 282 aa19.17■□□□□ 0.66
RIPK1-201ENST00000259808 IL27Q8NEV9 243 aa19.17■□□□□ 0.66
RIPK1-201ENST00000259808 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
RIPK1-201ENST00000259808 MRC2Q9UBG0 1479 aa19.15■□□□□ 0.66
RIPK1-201ENST00000259808 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
RIPK1-201ENST00000259808 C20orf194Q5TEA3 1177 aa19.14■□□□□ 0.66
RIPK1-201ENST00000259808 RTF1Q92541 710 aaKnown RBP19.14■□□□□ 0.65
RIPK1-201ENST00000259808 NFKBIBQ15653 356 aa19.14■□□□□ 0.65
RIPK1-201ENST00000259808 HMOX1P09601 288 aa19.14■□□□□ 0.65
RIPK1-201ENST00000259808 PPP2R1AP30153 589 aa19.14■□□□□ 0.65
RIPK1-201ENST00000259808 SLC12A5Q9H2X9 1139 aa19.14■□□□□ 0.65
RIPK1-201ENST00000259808 CABP2Q9NPB3 220 aa19.14■□□□□ 0.65
RIPK1-201ENST00000259808 PLB1Q6P1J6 1458 aa19.13■□□□□ 0.65
RIPK1-201ENST00000259808 NECTIN2Q92692 538 aa19.13■□□□□ 0.65
RIPK1-201ENST00000259808 PNNQ9H307 717 aaKnown RBP19.13■□□□□ 0.65
RIPK1-201ENST00000259808 TERF2IPQ9NYB0 399 aa19.13■□□□□ 0.65
RIPK1-201ENST00000259808 EIF3AQ14152 1382 aaKnown RBP19.13■□□□□ 0.65
RIPK1-201ENST00000259808 MTHFSP49914 203 aa19.12■□□□□ 0.65
RIPK1-201ENST00000259808 LNPKQ9C0E8 428 aa19.12■□□□□ 0.65
RIPK1-201ENST00000259808 PCF11O94913 1555 aaKnown RBP19.11■□□□□ 0.65
RIPK1-201ENST00000259808 BRPF3Q9ULD4 1205 aa19.11■□□□□ 0.65
RIPK1-201ENST00000259808 ZKSCAN2Q63HK3 967 aa19.11■□□□□ 0.65
RIPK1-201ENST00000259808 FRAT2O75474 233 aaPredicted RBP19.1■□□□□ 0.65
RIPK1-201ENST00000259808 TCP11L2Q8N4U5 519 aa19.1■□□□□ 0.65
RIPK1-201ENST00000259808 FGD1P98174 961 aa19.09■□□□□ 0.65
RIPK1-201ENST00000259808 RIPK4P57078 832 aa19.09■□□□□ 0.65
RIPK1-201ENST00000259808 L1TD1Q5T7N2 865 aaKnown RBP19.09■□□□□ 0.65
RIPK1-201ENST00000259808 TRIM6-TRIM34B2RNG4 842 aa19.09■□□□□ 0.65
RIPK1-201ENST00000259808 GOLGA6L3A6NEY3 463 aa19.08■□□□□ 0.65
RIPK1-201ENST00000259808 HAP1P54257 671 aaPredicted RBP19.08■□□□□ 0.65
RIPK1-201ENST00000259808 TSR2Q969E8 191 aaKnown RBP19.08■□□□□ 0.65
RIPK1-201ENST00000259808 BRD4O60885 1362 aaPredicted RBP19.07■□□□□ 0.64
RIPK1-201ENST00000259808 CGNL1Q0VF96 1302 aa19.07■□□□□ 0.64
RIPK1-201ENST00000259808 PTPRKQ15262 1439 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms