RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 GOLGA2Q08379 1002 aa15.81■□□□□ 0.12
USP30-201ENST00000257548 LAMC3Q9Y6N6 1575 aa15.81■□□□□ 0.12
USP30-201ENST00000257548 EFCAB5A4FU69 1503 aa15.81■□□□□ 0.12
USP30-201ENST00000257548 MYH16Q9H6N6 1097 aa15.8■□□□□ 0.12
USP30-201ENST00000257548 ROCK2O75116 1388 aaKnown RBP15.8■□□□□ 0.12
USP30-201ENST00000257548 HFM1A2PYH4 1435 aa15.79■□□□□ 0.12
USP30-201ENST00000257548 FAM43AQ8N2R8 423 aa15.79■□□□□ 0.12
USP30-201ENST00000257548 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
USP30-201ENST00000257548 ADAMTS8Q9UP79 889 aa15.78■□□□□ 0.12
USP30-201ENST00000257548 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
USP30-201ENST00000257548 CFAP43Q8NDM7 1665 aa15.78■□□□□ 0.12
USP30-201ENST00000257548 CUL7Q14999 1698 aa15.77■□□□□ 0.11
USP30-201ENST00000257548 NUP155O75694 1391 aa15.77■□□□□ 0.11
USP30-201ENST00000257548 RRP7AQ9Y3A4 280 aaKnown RBP15.76■□□□□ 0.11
USP30-201ENST00000257548 PRG4Q92954 1404 aaPredicted RBP15.76■□□□□ 0.11
USP30-201ENST00000257548 APAF1O14727 1248 aa15.75■□□□□ 0.11
USP30-201ENST00000257548 CTTNBP2Q8WZ74 1663 aa15.75■□□□□ 0.11
USP30-201ENST00000257548 FTSJ3Q8IY81 847 aaKnown RBP15.75■□□□□ 0.11
USP30-201ENST00000257548 EPRSP07814 1512 aaKnown RBP15.75■□□□□ 0.11
USP30-201ENST00000257548 WASHC2CQ9Y4E1 1318 aa15.75■□□□□ 0.11
USP30-201ENST00000257548 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
USP30-201ENST00000257548 PANK1Q8TE04 598 aa15.74■□□□□ 0.11
USP30-201ENST00000257548 NCOA1Q15788 1441 aa15.74■□□□□ 0.11
USP30-201ENST00000257548 THOC2Q8NI27 1593 aaKnown RBP15.74■□□□□ 0.11
USP30-201ENST00000257548 BCAR3O75815 825 aa15.74■□□□□ 0.11
USP30-201ENST00000257548 ABCA5Q8WWZ7 1642 aa15.74■□□□□ 0.11
USP30-201ENST00000257548 HSP90AB1P08238 724 aaKnown RBP15.73■□□□□ 0.11
USP30-201ENST00000257548 JPH4Q96JJ6 628 aa15.73■□□□□ 0.11
USP30-201ENST00000257548 TMF1P82094 1093 aa15.73■□□□□ 0.11
USP30-201ENST00000257548 KDM6BO15054 1643 aa15.73■□□□□ 0.11
USP30-201ENST00000257548 LRRIQ1Q96JM4 1722 aa15.72■□□□□ 0.11
USP30-201ENST00000257548 PTPN23Q9H3S7 1636 aa15.72■□□□□ 0.11
USP30-201ENST00000257548 HSCBQ8IWL3 235 aa15.71■□□□□ 0.11
USP30-201ENST00000257548 ZMYND15Q9H091 742 aa15.71■□□□□ 0.11
USP30-201ENST00000257548 PLB1Q6P1J6 1458 aa15.71■□□□□ 0.11
USP30-201ENST00000257548 HNRNPMP52272 730 aaKnown RBP eCLIP15.7■□□□□ 0.1
USP30-201ENST00000257548 NBPF1Q3BBV0 1214 aa15.69■□□□□ 0.1
USP30-201ENST00000257548 PANK2Q9BZ23 570 aa15.69■□□□□ 0.1
USP30-201ENST00000257548 DNTTIP2Q5QJE6 756 aaKnown RBP15.68■□□□□ 0.1
USP30-201ENST00000257548 TARBP1Q13395 1621 aaKnown RBP15.68■□□□□ 0.1
USP30-201ENST00000257548 MRC2Q9UBG0 1479 aa15.68■□□□□ 0.1
USP30-201ENST00000257548 IQGAP2Q13576 1575 aa15.67■□□□□ 0.1
USP30-201ENST00000257548 BRD4O60885 1362 aaPredicted RBP15.67■□□□□ 0.1
USP30-201ENST00000257548 MSNP26038 577 aaKnown RBP15.67■□□□□ 0.1
USP30-201ENST00000257548 RRAGDQ9NQL2 400 aaPredicted RBP15.67■□□□□ 0.1
USP30-201ENST00000257548 SAMD9Q5K651 1589 aa15.66■□□□□ 0.1
USP30-201ENST00000257548 FAM13BQ9NYF5 915 aa15.66■□□□□ 0.1
USP30-201ENST00000257548 AMER1Q5JTC6 1135 aaPredicted RBP15.65■□□□□ 0.1
USP30-201ENST00000257548 GOLGA6L22H0YM25 854 aa15.65■□□□□ 0.1
USP30-201ENST00000257548 RBM10P98175 930 aaKnown RBP15.65■□□□□ 0.1
USP30-201ENST00000257548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.65■□□□□ 0.1
USP30-201ENST00000257548 PLEKHD1A6NEE1 506 aa15.65■□□□□ 0.1
USP30-201ENST00000257548 DENND4BO75064 1496 aaPredicted RBP15.65■□□□□ 0.1
USP30-201ENST00000257548 SUPT6HQ7KZ85 1726 aaKnown RBP15.65■□□□□ 0.1
USP30-201ENST00000257548 EHBP1L1Q8N3D4 1523 aa15.64■□□□□ 0.1
USP30-201ENST00000257548 UGGT2Q9NYU1 1516 aa15.64■□□□□ 0.1
USP30-201ENST00000257548 TRAK2O60296 914 aa15.64■□□□□ 0.09
USP30-201ENST00000257548 PTMAP06454 111 aaKnown RBP15.64■□□□□ 0.09
USP30-201ENST00000257548 CENPJQ9HC77 1338 aaPredicted RBP15.64■□□□□ 0.09
USP30-201ENST00000257548 A0A0U1RQG5 324 aaPredicted RBP15.63■□□□□ 0.09
USP30-201ENST00000257548 SEC24BO95487 1268 aa15.62■□□□□ 0.09
USP30-201ENST00000257548 C8orf34Q49A92 452 aa15.62■□□□□ 0.09
USP30-201ENST00000257548 ABCC5O15440 1437 aa15.61■□□□□ 0.09
USP30-201ENST00000257548 RNF123Q5XPI4 1314 aa15.61■□□□□ 0.09
USP30-201ENST00000257548 PLCB2Q00722 1185 aa15.61■□□□□ 0.09
USP30-201ENST00000257548 NUP153P49790 1475 aaKnown RBP15.61■□□□□ 0.09
USP30-201ENST00000257548 ANKRD30BQ9BXX2 1392 aa15.59■□□□□ 0.09
USP30-201ENST00000257548 DAPK1P53355 1430 aa15.59■□□□□ 0.09
USP30-201ENST00000257548 ITPRIPQ8IWB1 547 aa15.59■□□□□ 0.09
USP30-201ENST00000257548 FOXD4L5Q5VV16 416 aaPredicted RBP15.59■□□□□ 0.09
USP30-201ENST00000257548 FOXD4L4Q8WXT5 416 aaPredicted RBP15.59■□□□□ 0.09
USP30-201ENST00000257548 DISP1Q96F81 1524 aa15.58■□□□□ 0.09
USP30-201ENST00000257548 U2SURPO15042 1029 aaKnown RBP15.58■□□□□ 0.09
USP30-201ENST00000257548 XRCC6P12956 609 aaKnown RBP eCLIP15.58■□□□□ 0.09
USP30-201ENST00000257548 IGHDP01880 384 aa15.58■□□□□ 0.08
USP30-201ENST00000257548 RWDD1Q9H446 243 aaPredicted RBP15.58■□□□□ 0.08
USP30-201ENST00000257548 MAPK8IP3Q9UPT6 1336 aa15.58■□□□□ 0.08
USP30-201ENST00000257548 ADAMTS12P58397 1594 aa15.57■□□□□ 0.08
USP30-201ENST00000257548 APBB1O00213 710 aa15.57■□□□□ 0.08
USP30-201ENST00000257548 MCM4P33991 863 aa15.56■□□□□ 0.08
USP30-201ENST00000257548 GRIN2AQ12879 1464 aa15.56■□□□□ 0.08
USP30-201ENST00000257548 DHX29Q7Z478 1369 aaKnown RBP15.56■□□□□ 0.08
USP30-201ENST00000257548 ESPNB1AK53 854 aa15.56■□□□□ 0.08
USP30-201ENST00000257548 GBP4Q96PP9 640 aa15.56■□□□□ 0.08
USP30-201ENST00000257548 CHMP5Q9NZZ3 219 aa15.56■□□□□ 0.08
USP30-201ENST00000257548 HECW1Q76N89 1606 aa15.56■□□□□ 0.08
USP30-201ENST00000257548 C22orf23Q9BZE7 217 aa15.55■□□□□ 0.08
USP30-201ENST00000257548 DDX49Q9Y6V7 483 aaKnown RBP15.55■□□□□ 0.08
USP30-201ENST00000257548 PMFBP1Q8TBY8 1022 aa15.55■□□□□ 0.08
USP30-201ENST00000257548 KIAA0586Q9BVV6 1533 aa15.54■□□□□ 0.08
USP30-201ENST00000257548 TBC1D2Q9BYX2 928 aa15.54■□□□□ 0.08
USP30-201ENST00000257548 IFT140Q96RY7 1462 aa15.54■□□□□ 0.08
USP30-201ENST00000257548 WDR62O43379 1518 aa15.54■□□□□ 0.08
USP30-201ENST00000257548 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
USP30-201ENST00000257548 SLC24A1O60721 1099 aa15.54■□□□□ 0.08
USP30-201ENST00000257548 MRE11P49959 708 aa15.54■□□□□ 0.08
USP30-201ENST00000257548 PDZRN3Q9UPQ7 1066 aa15.54■□□□□ 0.08
USP30-201ENST00000257548 CGNL1Q0VF96 1302 aa15.54■□□□□ 0.08
USP30-201ENST00000257548 FOXD4L6Q3SYB3 417 aaPredicted RBP15.53■□□□□ 0.08
USP30-201ENST00000257548 FOXD4L3Q6VB84 417 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms