RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 RSPH4AQ5TD94 716 aa10.18□□□□□ -0.78
DSG3-201ENST00000257189 HMMRO75330 724 aa10.18□□□□□ -0.78
DSG3-201ENST00000257189 GZF1Q9H116 711 aaPredicted RBP10.18□□□□□ -0.78
DSG3-201ENST00000257189 RRP12Q5JTH9 1297 aaKnown RBP10.17□□□□□ -0.78
DSG3-201ENST00000257189 NGDNQ8NEJ9 315 aaKnown RBP10.17□□□□□ -0.78
DSG3-201ENST00000257189 ARGLU1Q9NWB6 273 aaPredicted RBP10.17□□□□□ -0.78
DSG3-201ENST00000257189 KIF16BQ96L93 1317 aa10.17□□□□□ -0.78
DSG3-201ENST00000257189 CEP89Q96ST8 783 aa10.17□□□□□ -0.78
DSG3-201ENST00000257189 ATP6V1DQ9Y5K8 247 aa10.17□□□□□ -0.78
DSG3-201ENST00000257189 WASHC2AQ641Q2 1341 aa10.17□□□□□ -0.78
DSG3-201ENST00000257189 FANCIQ9NVI1 1328 aa10.17□□□□□ -0.78
DSG3-201ENST00000257189 PKNOX2Q96KN3 472 aa10.17□□□□□ -0.78
DSG3-201ENST00000257189 TPM2P07951 284 aa10.16□□□□□ -0.78
DSG3-201ENST00000257189 RGL3Q3MIN7 710 aa10.16□□□□□ -0.78
DSG3-201ENST00000257189 HDAC5Q9UQL6 1122 aa10.16□□□□□ -0.78
DSG3-201ENST00000257189 GOLGA2Q08379 1002 aa10.16□□□□□ -0.78
DSG3-201ENST00000257189 CARD11Q9BXL7 1154 aa10.16□□□□□ -0.78
DSG3-201ENST00000257189 TPM1P09493 284 aa10.15□□□□□ -0.78
DSG3-201ENST00000257189 TSR1Q2NL82 804 aaKnown RBP10.14□□□□□ -0.79
DSG3-201ENST00000257189 SLKQ9H2G2 1235 aaPredicted RBP10.14□□□□□ -0.79
DSG3-201ENST00000257189 TULP1O00294 542 aaPredicted RBP10.14□□□□□ -0.79
DSG3-201ENST00000257189 ST18O60284 1047 aa10.14□□□□□ -0.79
DSG3-201ENST00000257189 GRIN2BQ13224 1484 aa10.14□□□□□ -0.79
DSG3-201ENST00000257189 PAXIP1Q6ZW49 1069 aaPredicted RBP10.14□□□□□ -0.79
DSG3-201ENST00000257189 C16orf71Q8IYS4 520 aaPredicted RBP10.14□□□□□ -0.79
DSG3-201ENST00000257189 PDE3BQ13370 1112 aa10.13□□□□□ -0.79
DSG3-201ENST00000257189 TNIKQ9UKE5 1360 aa10.13□□□□□ -0.79
DSG3-201ENST00000257189 GAPVD1Q14C86 1478 aa10.13□□□□□ -0.79
DSG3-201ENST00000257189 DIAPH3Q9NSV4 1193 aa10.13□□□□□ -0.79
DSG3-201ENST00000257189 CCDC191Q8NCU4 936 aa10.13□□□□□ -0.79
DSG3-201ENST00000257189 AK7Q96M32 723 aa10.13□□□□□ -0.79
DSG3-201ENST00000257189 SPRYD3Q8NCJ5 442 aa10.12□□□□□ -0.79
DSG3-201ENST00000257189 RCAN3Q9UKA8 241 aa10.12□□□□□ -0.79
DSG3-201ENST00000257189 DCTN1Q14203 1278 aa10.12□□□□□ -0.79
DSG3-201ENST00000257189 TAF3Q5VWG9 929 aa10.12□□□□□ -0.79
DSG3-201ENST00000257189 GOLGA6L19H0YKK7 550 aa10.12□□□□□ -0.79
DSG3-201ENST00000257189 STK26Q9P289 416 aa10.12□□□□□ -0.79
DSG3-201ENST00000257189 AQRO60306 1485 aaKnown RBP eCLIP10.12□□□□□ -0.79
DSG3-201ENST00000257189 PRG4Q92954 1404 aaPredicted RBP10.12□□□□□ -0.79
DSG3-201ENST00000257189 HSP90B1P14625 803 aaKnown RBP10.11□□□□□ -0.79
DSG3-201ENST00000257189 RDXP35241 583 aaKnown RBP10.11□□□□□ -0.79
DSG3-201ENST00000257189 FAM43AQ8N2R8 423 aa10.11□□□□□ -0.79
DSG3-201ENST00000257189 RRP7BPQ9NSQ0 103 aa10.11□□□□□ -0.79
DSG3-201ENST00000257189 MROH2BQ7Z745 1585 aa10.11□□□□□ -0.79
DSG3-201ENST00000257189 SOX12O15370 315 aa10.11□□□□□ -0.79
DSG3-201ENST00000257189 HIRIP3Q9BW71 556 aaPredicted RBP10.11□□□□□ -0.79
DSG3-201ENST00000257189 CLSTN1O94985 981 aa10.11□□□□□ -0.79
DSG3-201ENST00000257189 GPATCH3Q96I76 525 aa10.11□□□□□ -0.79
DSG3-201ENST00000257189 TMF1P82094 1093 aa10.11□□□□□ -0.79
DSG3-201ENST00000257189 PODXL2Q9NZ53 605 aa10.1□□□□□ -0.79
DSG3-201ENST00000257189 FHAD1B1AJZ9 1412 aa10.1□□□□□ -0.79
DSG3-201ENST00000257189 ERCC4Q92889 916 aaPredicted RBP10.1□□□□□ -0.79
DSG3-201ENST00000257189 PHLDB1Q86UU1 1377 aa10.1□□□□□ -0.79
DSG3-201ENST00000257189 PSME1Q06323 249 aa10.1□□□□□ -0.79
DSG3-201ENST00000257189 RALBP1Q15311 655 aa10.09□□□□□ -0.79
DSG3-201ENST00000257189 HSP90B2PQ58FF3 399 aa10.09□□□□□ -0.79
DSG3-201ENST00000257189 GTF2E1P29083 439 aaPredicted RBP10.09□□□□□ -0.79
DSG3-201ENST00000257189 PPP6R1Q9UPN7 881 aa10.09□□□□□ -0.79
DSG3-201ENST00000257189 IPO7O95373 1038 aaKnown RBP10.08□□□□□ -0.8
DSG3-201ENST00000257189 KTN1Q86UP2 1357 aaKnown RBP10.08□□□□□ -0.8
DSG3-201ENST00000257189 NEUROD2Q15784 382 aa10.08□□□□□ -0.8
DSG3-201ENST00000257189 FAM13BQ9NYF5 915 aa10.08□□□□□ -0.8
DSG3-201ENST00000257189 DDX49Q9Y6V7 483 aaKnown RBP10.08□□□□□ -0.8
DSG3-201ENST00000257189 BECN2A8MW95 431 aa10.07□□□□□ -0.8
DSG3-201ENST00000257189 USP8P40818 1118 aa10.07□□□□□ -0.8
DSG3-201ENST00000257189 HMGN5P82970 282 aaKnown RBP10.07□□□□□ -0.8
DSG3-201ENST00000257189 RUFY1Q96T51 708 aa10.07□□□□□ -0.8
DSG3-201ENST00000257189 NGLY1Q96IV0 654 aa10.06□□□□□ -0.8
DSG3-201ENST00000257189 DHX8Q14562 1220 aaKnown RBP10.06□□□□□ -0.8
DSG3-201ENST00000257189 FAM161AQ3B820 660 aa10.06□□□□□ -0.8
DSG3-201ENST00000257189 HDGFL2Q7Z4V5 671 aaPredicted RBP10.06□□□□□ -0.8
DSG3-201ENST00000257189 NESP48681 1621 aa10.06□□□□□ -0.8
DSG3-201ENST00000257189 TXNDC2Q86VQ3 553 aa10.05□□□□□ -0.8
DSG3-201ENST00000257189 TEX14Q8IWB6 1497 aa10.05□□□□□ -0.8
DSG3-201ENST00000257189 HNRNPMP52272 730 aaKnown RBP eCLIP10.05□□□□□ -0.8
DSG3-201ENST00000257189 MFAP1P55081 439 aaKnown RBP10.05□□□□□ -0.8
DSG3-201ENST00000257189 CENPQQ7L2Z9 268 aaPredicted RBP10.05□□□□□ -0.8
DSG3-201ENST00000257189 ANKRD20A12PQ8NF67 263 aa10.05□□□□□ -0.8
DSG3-201ENST00000257189 TSPYL1Q9H0U9 437 aa10.05□□□□□ -0.8
DSG3-201ENST00000257189 CCDC39Q9UFE4 941 aa10.05□□□□□ -0.8
DSG3-201ENST00000257189 SAFB2Q14151 953 aaKnown RBP eCLIP10.04□□□□□ -0.8
DSG3-201ENST00000257189 MRE11P49959 708 aa10.04□□□□□ -0.8
DSG3-201ENST00000257189 SF3A1Q15459 793 aaKnown RBP10.04□□□□□ -0.8
DSG3-201ENST00000257189 ZNF330Q9Y3S2 320 aaPredicted RBP10.04□□□□□ -0.8
DSG3-201ENST00000257189 NBPF8Q3BBV2 869 aa10.04□□□□□ -0.8
DSG3-201ENST00000257189 NBPF14Q5TI25 921 aa10.04□□□□□ -0.8
DSG3-201ENST00000257189 SYNJ1O43426 1573 aa10.04□□□□□ -0.8
DSG3-201ENST00000257189 CCAR2Q8N163 923 aaKnown RBP10.03□□□□□ -0.8
DSG3-201ENST00000257189 TPD52L1Q16890 204 aaPredicted RBP10.03□□□□□ -0.8
DSG3-201ENST00000257189 KRI1Q8N9T8 703 aaKnown RBP10.03□□□□□ -0.8
DSG3-201ENST00000257189 CHMP5Q9NZZ3 219 aa10.03□□□□□ -0.8
DSG3-201ENST00000257189 H0YHG0 523 aa10.03□□□□□ -0.8
DSG3-201ENST00000257189 ZRSR2Q15696 482 aaKnown RBP10.03□□□□□ -0.8
DSG3-201ENST00000257189 MNS1Q8NEH6 495 aa10.03□□□□□ -0.8
DSG3-201ENST00000257189 ISY1Q9ULR0 285 aaKnown RBP10.03□□□□□ -0.8
DSG3-201ENST00000257189 CEP162Q5TB80 1403 aa10.03□□□□□ -0.8
DSG3-201ENST00000257189 LAMC3Q9Y6N6 1575 aa10.03□□□□□ -0.8
DSG3-201ENST00000257189 CCP110O43303 1012 aa10.02□□□□□ -0.8
DSG3-201ENST00000257189 HOOK1Q9UJC3 728 aaKnown RBP10.02□□□□□ -0.8
DSG3-201ENST00000257189 U2SURPO15042 1029 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms