RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 ZFYVE16Q7Z3T8 1539 aa13.06□□□□□ -0.32
HLA-DOA-201ENST00000229829 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
HLA-DOA-201ENST00000229829 UNC13BO14795 1591 aa13.05□□□□□ -0.32
HLA-DOA-201ENST00000229829 HNRNPUQ00839 825 aaKnown RBP eCLIP13.04□□□□□ -0.32
HLA-DOA-201ENST00000229829 PTPRGP23470 1445 aa13.04□□□□□ -0.32
HLA-DOA-201ENST00000229829 JPH4Q96JJ6 628 aa13.03□□□□□ -0.32
HLA-DOA-201ENST00000229829 GCC2Q8IWJ2 1684 aa13.02□□□□□ -0.32
HLA-DOA-201ENST00000229829 CDK11AQ9UQ88 783 aaPredicted RBP13.02□□□□□ -0.32
HLA-DOA-201ENST00000229829 SALL2Q9Y467 1007 aaPredicted RBP13.02□□□□□ -0.32
HLA-DOA-201ENST00000229829 CCDC184Q52MB2 194 aa13.02□□□□□ -0.33
HLA-DOA-201ENST00000229829 MPHOSPH9Q99550 1183 aa13.02□□□□□ -0.33
HLA-DOA-201ENST00000229829 C3P01024 1663 aa13.02□□□□□ -0.33
HLA-DOA-201ENST00000229829 CDK13Q14004 1512 aaKnown RBP13.02□□□□□ -0.33
HLA-DOA-201ENST00000229829 PIK3C2BO00750 1634 aa13.02□□□□□ -0.33
HLA-DOA-201ENST00000229829 PLCH2O75038 1416 aa13.01□□□□□ -0.33
HLA-DOA-201ENST00000229829 IQGAP3Q86VI3 1631 aa13.01□□□□□ -0.33
HLA-DOA-201ENST00000229829 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
HLA-DOA-201ENST00000229829 RTEL1-TNFRSF6BF6WH68 1400 aa13.01□□□□□ -0.33
HLA-DOA-201ENST00000229829 C11orf95C9JLR9 678 aaPredicted RBP13.01□□□□□ -0.33
HLA-DOA-201ENST00000229829 POGZQ7Z3K3 1410 aa13.01□□□□□ -0.33
HLA-DOA-201ENST00000229829 DNMT1P26358 1616 aaKnown RBP13.01□□□□□ -0.33
HLA-DOA-201ENST00000229829 PRDM15P57071 1507 aaPredicted RBP13□□□□□ -0.33
HLA-DOA-201ENST00000229829 POLR1AO95602 1720 aaPredicted RBP13□□□□□ -0.33
HLA-DOA-201ENST00000229829 PLEKHH2Q8IVE3 1493 aa13□□□□□ -0.33
HLA-DOA-201ENST00000229829 EIF4G2P78344 907 aaKnown RBP eCLIP12.98□□□□□ -0.33
HLA-DOA-201ENST00000229829 AEBP2Q6ZN18 517 aaPredicted RBP12.98□□□□□ -0.33
HLA-DOA-201ENST00000229829 EIF5BO60841 1220 aaKnown RBP12.97□□□□□ -0.33
HLA-DOA-201ENST00000229829 ADGRL2O95490 1459 aa12.97□□□□□ -0.33
HLA-DOA-201ENST00000229829 COL17A1Q9UMD9 1497 aaPredicted RBP12.97□□□□□ -0.33
HLA-DOA-201ENST00000229829 ZNF644Q9H582 1327 aaPredicted RBP12.97□□□□□ -0.33
HLA-DOA-201ENST00000229829 TROQ12816 1431 aaPredicted RBP12.97□□□□□ -0.33
HLA-DOA-201ENST00000229829 CHMP7Q8WUX9 453 aaPredicted RBP12.97□□□□□ -0.33
HLA-DOA-201ENST00000229829 LAMC1P11047 1609 aa12.96□□□□□ -0.33
HLA-DOA-201ENST00000229829 NBPF8Q3BBV2 869 aa12.96□□□□□ -0.34
HLA-DOA-201ENST00000229829 TSPOAP1O95153 1857 aa12.95□□□□□ -0.34
HLA-DOA-201ENST00000229829 STRCQ7RTU9 1775 aa12.94□□□□□ -0.34
HLA-DOA-201ENST00000229829 RTL5Q5HYW3 569 aaPredicted RBP12.93□□□□□ -0.34
HLA-DOA-201ENST00000229829 PRAG1Q86YV5 1406 aa12.93□□□□□ -0.34
HLA-DOA-201ENST00000229829 FAM9BQ8IZU0 186 aa12.93□□□□□ -0.34
HLA-DOA-201ENST00000229829 MIA2Q96PC5 1412 aa12.92□□□□□ -0.34
HLA-DOA-201ENST00000229829 MYO3AQ8NEV4 1616 aa12.92□□□□□ -0.34
HLA-DOA-201ENST00000229829 AKNAQ7Z591 1439 aa12.91□□□□□ -0.34
HLA-DOA-201ENST00000229829 MADDQ8WXG6 1647 aa12.91□□□□□ -0.34
HLA-DOA-201ENST00000229829 PRKRIP1Q9H875 184 aaPredicted RBP12.91□□□□□ -0.34
HLA-DOA-201ENST00000229829 CNTLNQ9NXG0 1405 aa12.91□□□□□ -0.34
HLA-DOA-201ENST00000229829 CCDC7Q96M83 1385 aa12.9□□□□□ -0.34
HLA-DOA-201ENST00000229829 ANKRD30BQ9BXX2 1392 aa12.9□□□□□ -0.34
HLA-DOA-201ENST00000229829 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
HLA-DOA-201ENST00000229829 MBD5Q9P267 1494 aa12.9□□□□□ -0.35
HLA-DOA-201ENST00000229829 DAPK1P53355 1430 aa12.9□□□□□ -0.35
HLA-DOA-201ENST00000229829 SPATA31D1Q6ZQQ2 1576 aa12.89□□□□□ -0.35
HLA-DOA-201ENST00000229829 CNGB1Q14028 1251 aaPredicted RBP12.89□□□□□ -0.35
HLA-DOA-201ENST00000229829 IFT172Q9UG01 1749 aa12.89□□□□□ -0.35
HLA-DOA-201ENST00000229829 ABCC5O15440 1437 aa12.89□□□□□ -0.35
HLA-DOA-201ENST00000229829 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
HLA-DOA-201ENST00000229829 ZNF518AQ6AHZ1 1483 aa12.88□□□□□ -0.35
HLA-DOA-201ENST00000229829 MRS2Q9HD23 443 aa12.88□□□□□ -0.35
HLA-DOA-201ENST00000229829 SYNMO15061 1565 aa12.88□□□□□ -0.35
HLA-DOA-201ENST00000229829 RPRD2Q5VT52 1461 aaKnown RBP12.87□□□□□ -0.35
HLA-DOA-201ENST00000229829 KCNA4P22459 653 aa12.87□□□□□ -0.35
HLA-DOA-201ENST00000229829 KIF7Q2M1P5 1343 aa12.87□□□□□ -0.35
HLA-DOA-201ENST00000229829 NPATQ14207 1427 aa12.86□□□□□ -0.35
HLA-DOA-201ENST00000229829 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
HLA-DOA-201ENST00000229829 UGGT1Q9NYU2 1555 aa12.86□□□□□ -0.35
HLA-DOA-201ENST00000229829 IL27Q8NEV9 243 aa12.86□□□□□ -0.35
HLA-DOA-201ENST00000229829 CAMSAP1Q5T5Y3 1602 aa12.85□□□□□ -0.35
HLA-DOA-201ENST00000229829 SETD1AO15047 1707 aaKnown RBP12.84□□□□□ -0.35
HLA-DOA-201ENST00000229829 ROCK1Q13464 1354 aa12.84□□□□□ -0.35
HLA-DOA-201ENST00000229829 RIMS1Q86UR5 1692 aaKnown RBP12.84□□□□□ -0.35
HLA-DOA-201ENST00000229829 SPATA31E1Q6ZUB1 1445 aa12.84□□□□□ -0.35
HLA-DOA-201ENST00000229829 ZNF326Q5BKZ1 582 aaKnown RBP12.83□□□□□ -0.36
HLA-DOA-201ENST00000229829 ZNF777Q9ULD5 760 aaPredicted RBP12.83□□□□□ -0.36
HLA-DOA-201ENST00000229829 ATP7AQ04656 1500 aa12.83□□□□□ -0.36
HLA-DOA-201ENST00000229829 SENP3-EIF4A1A0A087X0R7 540 aa12.83□□□□□ -0.36
HLA-DOA-201ENST00000229829 POLR3GLQ9BT43 218 aa12.83□□□□□ -0.36
HLA-DOA-201ENST00000229829 EFCAB6Q5THR3 1501 aa12.83□□□□□ -0.36
HLA-DOA-201ENST00000229829 AMER1Q5JTC6 1135 aaPredicted RBP12.82□□□□□ -0.36
HLA-DOA-201ENST00000229829 C9orf84Q5VXU9 1444 aa12.82□□□□□ -0.36
HLA-DOA-201ENST00000229829 GPATCH8Q9UKJ3 1502 aaKnown RBP12.82□□□□□ -0.36
HLA-DOA-201ENST00000229829 CD109Q6YHK3 1445 aa12.81□□□□□ -0.36
HLA-DOA-201ENST00000229829 B4GALNT3Q6L9W6 998 aa12.81□□□□□ -0.36
HLA-DOA-201ENST00000229829 CFDP1Q9UEE9 299 aaPredicted RBP12.81□□□□□ -0.36
HLA-DOA-201ENST00000229829 PLA2R1Q13018 1463 aa12.8□□□□□ -0.36
HLA-DOA-201ENST00000229829 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
HLA-DOA-201ENST00000229829 FANCAO15360 1455 aa12.8□□□□□ -0.36
HLA-DOA-201ENST00000229829 TET3O43151 1660 aa12.8□□□□□ -0.36
HLA-DOA-201ENST00000229829 PZPP20742 1482 aa12.79□□□□□ -0.36
HLA-DOA-201ENST00000229829 ZBED9Q6R2W3 1325 aa12.79□□□□□ -0.36
HLA-DOA-201ENST00000229829 PPP4R2Q9NY27 417 aa12.79□□□□□ -0.36
HLA-DOA-201ENST00000229829 UBR1Q8IWV7 1749 aa12.78□□□□□ -0.36
HLA-DOA-201ENST00000229829 NOP58Q9Y2X3 529 aaKnown RBP12.78□□□□□ -0.36
HLA-DOA-201ENST00000229829 FANCIQ9NVI1 1328 aa12.78□□□□□ -0.36
HLA-DOA-201ENST00000229829 ARHGAP31Q2M1Z3 1444 aa12.78□□□□□ -0.36
HLA-DOA-201ENST00000229829 ADGRL1O94910 1474 aa12.78□□□□□ -0.36
HLA-DOA-201ENST00000229829 PKD2Q13563 968 aa12.77□□□□□ -0.36
HLA-DOA-201ENST00000229829 NPM2Q86SE8 214 aaKnown RBP12.77□□□□□ -0.36
HLA-DOA-201ENST00000229829 PAK3O75914 559 aaPredicted RBP12.77□□□□□ -0.37
HLA-DOA-201ENST00000229829 ATP10AO60312 1499 aa12.76□□□□□ -0.37
HLA-DOA-201ENST00000229829 KNDC1Q76NI1 1749 aa12.75□□□□□ -0.37
HLA-DOA-201ENST00000229829 FBLN2P98095 1184 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms