RNA–Protein interactions for RNA: ENST00000159111.8

KDM4B-201, Transcript of lysine demethylase 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4B, Length 5,593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-201ENST00000159111 PRKRIP1Q9H875 184 aaPredicted RBP21.45■■□□□ 1.02
KDM4B-201ENST00000159111 CASKIN1Q8WXD9 1431 aa21.45■■□□□ 1.02
KDM4B-201ENST00000159111 FYCO1Q9BQS8 1478 aa21.44■■□□□ 1.02
KDM4B-201ENST00000159111 GPATCH3Q96I76 525 aa21.44■■□□□ 1.02
KDM4B-201ENST00000159111 EVC2Q86UK5 1308 aa21.44■■□□□ 1.02
KDM4B-201ENST00000159111 CGNL1Q0VF96 1302 aa21.43■■□□□ 1.02
KDM4B-201ENST00000159111 ZBED9Q6R2W3 1325 aa21.43■■□□□ 1.02
KDM4B-201ENST00000159111 NUTM2DQ5VT03 806 aaPredicted RBP21.43■■□□□ 1.02
KDM4B-201ENST00000159111 DEKP35659 375 aaKnown RBP21.42■■□□□ 1.02
KDM4B-201ENST00000159111 NGDNQ8NEJ9 315 aaKnown RBP21.42■■□□□ 1.02
KDM4B-201ENST00000159111 TAOK2Q9UL54 1235 aa21.42■■□□□ 1.02
KDM4B-201ENST00000159111 MSNP26038 577 aaKnown RBP21.41■■□□□ 1.02
KDM4B-201ENST00000159111 IPO9Q96P70 1041 aaKnown RBP21.4■■□□□ 1.02
KDM4B-201ENST00000159111 TSHZ2Q9NRE2 1034 aa21.4■■□□□ 1.02
KDM4B-201ENST00000159111 CHAF1AQ13111 956 aaPredicted RBP21.4■■□□□ 1.02
KDM4B-201ENST00000159111 STAC3Q96MF2 364 aa21.39■■□□□ 1.02
KDM4B-201ENST00000159111 E9PSI1 815 aa21.39■■□□□ 1.01
KDM4B-201ENST00000159111 AMPHP49418 695 aa21.39■■□□□ 1.01
KDM4B-201ENST00000159111 PRDM2Q13029 1718 aa21.38■■□□□ 1.01
KDM4B-201ENST00000159111 HTATSF1O43719 755 aaKnown RBP21.38■■□□□ 1.01
KDM4B-201ENST00000159111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.37■■□□□ 1.01
KDM4B-201ENST00000159111 MFAP1P55081 439 aaKnown RBP21.37■■□□□ 1.01
KDM4B-201ENST00000159111 CENPQQ7L2Z9 268 aaPredicted RBP21.37■■□□□ 1.01
KDM4B-201ENST00000159111 NGEFQ8N5V2 710 aa21.36■■□□□ 1.01
KDM4B-201ENST00000159111 GNL2Q13823 731 aaKnown RBP21.35■■□□□ 1.01
KDM4B-201ENST00000159111 NCOA2Q15596 1464 aa21.35■■□□□ 1.01
KDM4B-201ENST00000159111 SYAP1Q96A49 352 aaPredicted RBP21.35■■□□□ 1.01
KDM4B-201ENST00000159111 MIA2Q96PC5 1412 aa21.33■■□□□ 1.01
KDM4B-201ENST00000159111 CLUAP1Q96AJ1 413 aa21.33■■□□□ 1.01
KDM4B-201ENST00000159111 COG3Q96JB2 828 aa21.33■■□□□ 1
KDM4B-201ENST00000159111 RTN4Q9NQC3 1192 aaKnown RBP21.33■■□□□ 1
KDM4B-201ENST00000159111 RRP1P56182 461 aaKnown RBP21.32■■□□□ 1
KDM4B-201ENST00000159111 EFCAB5A4FU69 1503 aa21.32■■□□□ 1
KDM4B-201ENST00000159111 GRIN2BQ13224 1484 aa21.31■■□□□ 1
KDM4B-201ENST00000159111 DRC7Q8IY82 874 aa21.31■■□□□ 1
KDM4B-201ENST00000159111 SLKQ9H2G2 1235 aaPredicted RBP21.31■■□□□ 1
KDM4B-201ENST00000159111 TRIM6-TRIM34B2RNG4 842 aa21.3■■□□□ 1
KDM4B-201ENST00000159111 SLC4A10Q6U841 1118 aa21.3■■□□□ 1
KDM4B-201ENST00000159111 CFTRP13569 1480 aa21.3■■□□□ 1
KDM4B-201ENST00000159111 SYNJ1O43426 1573 aa21.29■■□□□ 1
KDM4B-201ENST00000159111 CCDC7Q96M83 1385 aa21.28■■□□□ 1
KDM4B-201ENST00000159111 ZKSCAN2Q63HK3 967 aa21.28■■□□□ 1
KDM4B-201ENST00000159111 CSPP1Q1MSJ5 1256 aa21.28■■□□□ 1
KDM4B-201ENST00000159111 RRP7AQ9Y3A4 280 aaKnown RBP21.28■■□□□ 1
KDM4B-201ENST00000159111 ANKRD50Q9ULJ7 1429 aa21.27■■□□□ 1
KDM4B-201ENST00000159111 GORABQ5T7V8 394 aa21.27■■□□□ 1
KDM4B-201ENST00000159111 CNTLNQ9NXG0 1405 aa21.27■■□□□ 1
KDM4B-201ENST00000159111 RRBP1Q9P2E9 1410 aaKnown RBP21.27■■□□□ 1
KDM4B-201ENST00000159111 AQRO60306 1485 aaKnown RBP eCLIP21.27■■□□□ 17e-7■■■■□ 19.5
KDM4B-201ENST00000159111 TULP1O00294 542 aaPredicted RBP21.26■□□□□ 0.99
KDM4B-201ENST00000159111 ZNF330Q9Y3S2 320 aaPredicted RBP21.26■□□□□ 0.99
KDM4B-201ENST00000159111 OSCARQ8IYS5 282 aa21.26■□□□□ 0.99
KDM4B-201ENST00000159111 TAF7LQ5H9L4 462 aa21.24■□□□□ 0.99
KDM4B-201ENST00000159111 FAM161AQ3B820 660 aa21.24■□□□□ 0.99
KDM4B-201ENST00000159111 EHBP1L1Q8N3D4 1523 aa21.24■□□□□ 0.99
KDM4B-201ENST00000159111 TOP2BQ02880 1626 aa21.24■□□□□ 0.99
KDM4B-201ENST00000159111 ST18O60284 1047 aa21.23■□□□□ 0.99
KDM4B-201ENST00000159111 CHMP3Q9Y3E7 222 aa21.23■□□□□ 0.99
KDM4B-201ENST00000159111 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.22■□□□□ 0.99
KDM4B-201ENST00000159111 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
KDM4B-201ENST00000159111 GOLGA6L3A6NEY3 463 aa21.21■□□□□ 0.99
KDM4B-201ENST00000159111 ZNF644Q9H582 1327 aaPredicted RBP21.21■□□□□ 0.99
KDM4B-201ENST00000159111 LTV1Q96GA3 475 aaPredicted RBP21.21■□□□□ 0.99
KDM4B-201ENST00000159111 ARAP1Q96P48 1450 aa21.21■□□□□ 0.99
KDM4B-201ENST00000159111 KIF7Q2M1P5 1343 aa21.21■□□□□ 0.99
KDM4B-201ENST00000159111 KIAA2012Q0VF49 1180 aa21.2■□□□□ 0.98
KDM4B-201ENST00000159111 MINK1Q8N4C8 1332 aaPredicted RBP21.2■□□□□ 0.98
KDM4B-201ENST00000159111 CRBNQ96SW2 442 aa21.2■□□□□ 0.98
KDM4B-201ENST00000159111 ARHGAP5Q13017 1502 aa21.2■□□□□ 0.98
KDM4B-201ENST00000159111 DIAPH1O60610 1272 aaKnown RBP21.2■□□□□ 0.98
KDM4B-201ENST00000159111 HSP90B1P14625 803 aaKnown RBP21.19■□□□□ 0.98
KDM4B-201ENST00000159111 EXOC6Q8TAG9 804 aa21.19■□□□□ 0.98
KDM4B-201ENST00000159111 SYNJ2O15056 1496 aa21.19■□□□□ 0.98
KDM4B-201ENST00000159111 TPM4P67936 248 aa21.18■□□□□ 0.98
KDM4B-201ENST00000159111 GZF1Q9H116 711 aaPredicted RBP21.18■□□□□ 0.98
KDM4B-201ENST00000159111 PDE4AP27815 886 aa21.18■□□□□ 0.98
KDM4B-201ENST00000159111 C1orf141Q5JVX7 400 aa21.18■□□□□ 0.98
KDM4B-201ENST00000159111 NUTM2FA1L443 756 aa21.17■□□□□ 0.98
KDM4B-201ENST00000159111 APAF1O14727 1248 aa21.17■□□□□ 0.98
KDM4B-201ENST00000159111 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
KDM4B-201ENST00000159111 DDX19BQ9UMR2 479 aa21.16■□□□□ 0.98
KDM4B-201ENST00000159111 RUNDC1Q96C34 613 aa21.16■□□□□ 0.98
KDM4B-201ENST00000159111 CCDC34Q96HJ3 373 aa21.16■□□□□ 0.98
KDM4B-201ENST00000159111 TMX4Q9H1E5 349 aaPredicted RBP21.16■□□□□ 0.98
KDM4B-201ENST00000159111 ISY1Q9ULR0 285 aaKnown RBP21.16■□□□□ 0.98
KDM4B-201ENST00000159111 DDX11L8A8MPP1 907 aa21.15■□□□□ 0.98
KDM4B-201ENST00000159111 USP35Q9P2H5 1018 aa21.15■□□□□ 0.98
KDM4B-201ENST00000159111 PLIN1O60240 522 aa21.15■□□□□ 0.98
KDM4B-201ENST00000159111 IFT140Q96RY7 1462 aa21.15■□□□□ 0.98
KDM4B-201ENST00000159111 ROCK1Q13464 1354 aa21.15■□□□□ 0.98
KDM4B-201ENST00000159111 HECW1Q76N89 1606 aa21.15■□□□□ 0.98
KDM4B-201ENST00000159111 PRXQ9BXM0 1461 aa21.14■□□□□ 0.98
KDM4B-201ENST00000159111 PHF14O94880 888 aa21.14■□□□□ 0.97
KDM4B-201ENST00000159111 KIF3AQ9Y496 699 aa21.14■□□□□ 0.97
KDM4B-201ENST00000159111 KIF16BQ96L93 1317 aa21.14■□□□□ 0.97
KDM4B-201ENST00000159111 ANKRD45Q5TZF3 282 aa21.13■□□□□ 0.97
KDM4B-201ENST00000159111 BRD4O60885 1362 aaPredicted RBP21.13■□□□□ 0.97
KDM4B-201ENST00000159111 API5Q9BZZ5 524 aaKnown RBP21.12■□□□□ 0.97
KDM4B-201ENST00000159111 BCL2L13Q9BXK5 485 aa21.12■□□□□ 0.97
KDM4B-201ENST00000159111 AAMPQ13685 434 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms