RNA–Protein interactions for RNA: ENSMUST00000225520.1

Ap3s1-204, Transcript of AP-3 complex subunit sigma-1, mousemouse

BASIC

Gene Ap3s1, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1-204ENSMUST00000225520 Kif3bQ61771 747 aa29.23■■■□□ 2.27
Ap3s1-204ENSMUST00000225520 Knl1Q66JQ7 1612 aa29.22■■■□□ 2.27
Ap3s1-204ENSMUST00000225520 Adgrl2Q8JZZ7 1487 aa29.2■■■□□ 2.26
Ap3s1-204ENSMUST00000225520 Adgrb2Q8CGM1 1561 aa29.2■■■□□ 2.26
Ap3s1-204ENSMUST00000225520 Cabp1Q9JLK7 227 aa29.19■■■□□ 2.26
Ap3s1-204ENSMUST00000225520 Usp54Q8BL06 1588 aaKnown RBP29.18■■■□□ 2.26
Ap3s1-204ENSMUST00000225520 Naip5Q9R016 1403 aa29.16■■■□□ 2.26
Ap3s1-204ENSMUST00000225520 Kdm3bQ6ZPY7 1562 aa29.15■■■□□ 2.26
Ap3s1-204ENSMUST00000225520 Myo5cE9Q1F5 1742 aa29.14■■■□□ 2.26
Ap3s1-204ENSMUST00000225520 Chic2Q9D9G3 165 aa29.12■■■□□ 2.25
Ap3s1-204ENSMUST00000225520 Spag9Q58A65 1321 aaKnown RBP29.12■■■□□ 2.25
Ap3s1-204ENSMUST00000225520 Arhgap23Q69ZH9 1483 aa29.11■■■□□ 2.25
Ap3s1-204ENSMUST00000225520 Dip2aQ8BWT5 1523 aa29.11■■■□□ 2.25
Ap3s1-204ENSMUST00000225520 Il16O54824 1322 aa29.11■■■□□ 2.25
Ap3s1-204ENSMUST00000225520 Ssh2Q5SW75 1423 aa29.1■■■□□ 2.25
Ap3s1-204ENSMUST00000225520 ShprhQ7TPQ3 1674 aa29.09■■■□□ 2.25
Ap3s1-204ENSMUST00000225520 Bcl9Q9D219 1425 aa29.05■■■□□ 2.24
Ap3s1-204ENSMUST00000225520 Zbtb7cQ8VCZ7 619 aa29.05■■■□□ 2.24
Ap3s1-204ENSMUST00000225520 Prex1Q69ZK0 1650 aa29.05■■■□□ 2.24
Ap3s1-204ENSMUST00000225520 Kif1bQ60575 1816 aaKnown RBP29.04■■■□□ 2.24
Ap3s1-204ENSMUST00000225520 Med14A2ABV5 1459 aaKnown RBP29.04■■■□□ 2.24
Ap3s1-204ENSMUST00000225520 Rsph4aQ8BYM7 716 aa29.01■■■□□ 2.23
Ap3s1-204ENSMUST00000225520 Vps8Q0P5W1 1427 aa28.99■■■□□ 2.23
Ap3s1-204ENSMUST00000225520 Gm13697A2AK42 830 aa28.96■■■□□ 2.23
Ap3s1-204ENSMUST00000225520 Abcc6Q9R1S7 1498 aa28.95■■■□□ 2.22
Ap3s1-204ENSMUST00000225520 Adamts7Q68SA9 1657 aa28.94■■■□□ 2.22
Ap3s1-204ENSMUST00000225520 Phlpp1Q8CHE4 1687 aa28.91■■■□□ 2.22
Ap3s1-204ENSMUST00000225520 Ltbp4Q8K4G1 1666 aa28.9■■■□□ 2.22
Ap3s1-204ENSMUST00000225520 Hfm1D3Z4R1 1434 aa28.89■■■□□ 2.22
Ap3s1-204ENSMUST00000225520 Rimbp3Q3V0F0 1606 aa28.87■■■□□ 2.21
Ap3s1-204ENSMUST00000225520 UacaQ8CGB3 1411 aa28.87■■■□□ 2.21
Ap3s1-204ENSMUST00000225520 Robo2Q7TPD3 1470 aa28.87■■■□□ 2.21
Ap3s1-204ENSMUST00000225520 Pip4k2bQ80XI4 416 aa28.86■■■□□ 2.21
Ap3s1-204ENSMUST00000225520 Fam50aQ9WV03 339 aaKnown RBP28.86■■■□□ 2.21
Ap3s1-204ENSMUST00000225520 Hnrnpul2Q00PI9 745 aaKnown RBP28.85■■■□□ 2.21
Ap3s1-204ENSMUST00000225520 Ncoa1P70365 1447 aa28.85■■■□□ 2.21
Ap3s1-204ENSMUST00000225520 Akap12Q9WTQ5 1684 aa28.84■■■□□ 2.21
Ap3s1-204ENSMUST00000225520 Rfx7F8VPJ6 1459 aa28.84■■■□□ 2.21
Ap3s1-204ENSMUST00000225520 Pde4cQ3UEI1 686 aa28.82■■■□□ 2.2
Ap3s1-204ENSMUST00000225520 UbtfP25976 765 aaKnown RBP28.81■■■□□ 2.2
Ap3s1-204ENSMUST00000225520 Chd2E9PZM4 1827 aaKnown RBP28.8■■■□□ 2.2
Ap3s1-204ENSMUST00000225520 AlkP97793 1621 aa28.79■■■□□ 2.2
Ap3s1-204ENSMUST00000225520 Tmem131lQ3U3D7 1597 aa28.77■■■□□ 2.2
Ap3s1-204ENSMUST00000225520 NclP09405 707 aaKnown RBP28.77■■■□□ 2.2
Ap3s1-204ENSMUST00000225520 Asxl1P59598 1514 aa28.77■■■□□ 2.2
Ap3s1-204ENSMUST00000225520 Adgrb3Q80ZF8 1522 aa28.75■■■□□ 2.19
Ap3s1-204ENSMUST00000225520 GphnQ8BUV3 769 aaKnown RBP28.75■■■□□ 2.19
Ap3s1-204ENSMUST00000225520 Prdm2A2A7B5 1709 aaKnown RBP28.73■■■□□ 2.19
Ap3s1-204ENSMUST00000225520 Rims2Q9EQZ7 1530 aa28.72■■■□□ 2.19
Ap3s1-204ENSMUST00000225520 Scaf11E9PZM7 1456 aaKnown RBP28.72■■■□□ 2.19
Ap3s1-204ENSMUST00000225520 Fbxo41Q6NS60 873 aa28.7■■■□□ 2.18
Ap3s1-204ENSMUST00000225520 Lamc1P02468 1607 aaKnown RBP28.69■■■□□ 2.18
Ap3s1-204ENSMUST00000225520 Kif13aQ9EQW7 1749 aa28.69■■■□□ 2.18
Ap3s1-204ENSMUST00000225520 Kdm5aQ3UXZ9 1690 aa28.67■■■□□ 2.18
Ap3s1-204ENSMUST00000225520 Zfp644E9QA22 1323 aa28.67■■■□□ 2.18
Ap3s1-204ENSMUST00000225520 Nup155Q99P88 1391 aaKnown RBP28.66■■■□□ 2.18
Ap3s1-204ENSMUST00000225520 AnkarA2RT91 1465 aa28.66■■■□□ 2.18
Ap3s1-204ENSMUST00000225520 DroshaQ5HZJ0 1373 aaKnown RBP28.64■■■□□ 2.18
Ap3s1-204ENSMUST00000225520 Fhad1A6PWD2 1420 aa28.64■■■□□ 2.18
Ap3s1-204ENSMUST00000225520 Map4P27546 1125 aaKnown RBP28.64■■■□□ 2.18
Ap3s1-204ENSMUST00000225520 Gli3Q61602 1583 aa28.62■■■□□ 2.17
Ap3s1-204ENSMUST00000225520 Ino80Q6ZPV2 1559 aa28.61■■■□□ 2.17
Ap3s1-204ENSMUST00000225520 Ttc21bQ0HA38 1315 aa28.61■■■□□ 2.17
Ap3s1-204ENSMUST00000225520 Itsn1Q9Z0R4 1714 aa28.6■■■□□ 2.17
Ap3s1-204ENSMUST00000225520 Clstn2Q9ER65 966 aa28.6■■■□□ 2.17
Ap3s1-204ENSMUST00000225520 Ylpm1Q9R0I7 1386 aaKnown RBP28.6■■■□□ 2.17
Ap3s1-204ENSMUST00000225520 Iqgap1Q9JKF1 1657 aaKnown RBP28.54■■■□□ 2.16
Ap3s1-204ENSMUST00000225520 Skint5A7XUY5 1461 aa28.54■■■□□ 2.16
Ap3s1-204ENSMUST00000225520 Myom3A2ABU4 1439 aa28.54■■■□□ 2.16
Ap3s1-204ENSMUST00000225520 Mia2Q91ZV0 1396 aa28.52■■■□□ 2.16
Ap3s1-204ENSMUST00000225520 Iqgap3F8VQ29 1632 aa28.51■■■□□ 2.15
Ap3s1-204ENSMUST00000225520 Nsd2Q8BVE8 1365 aa28.5■■■□□ 2.15
Ap3s1-204ENSMUST00000225520 Arid4bA2CG63 1314 aaKnown RBP28.5■■■□□ 2.15
Ap3s1-204ENSMUST00000225520 Tubgcp6G5E8P0 1769 aa28.5■■■□□ 2.15
Ap3s1-204ENSMUST00000225520 Ttll5Q8CHB8 1328 aa28.48■■■□□ 2.15
Ap3s1-204ENSMUST00000225520 Cd109Q8R422 1442 aa28.48■■■□□ 2.15
Ap3s1-204ENSMUST00000225520 Rapgef3Q8VCC8 918 aa28.46■■■□□ 2.15
Ap3s1-204ENSMUST00000225520 Eif2ak4Q9QZ05 1648 aa28.46■■■□□ 2.15
Ap3s1-204ENSMUST00000225520 Nrxn3Q6P9K9 1571 aa28.45■■■□□ 2.15
Ap3s1-204ENSMUST00000225520 Ube2uB1AUC4 352 aa28.45■■■□□ 2.14
Ap3s1-204ENSMUST00000225520 Efcab6Q6P1E8 1516 aa28.43■■■□□ 2.14
Ap3s1-204ENSMUST00000225520 Naip7Q9JIB3 1402 aa28.43■■■□□ 2.14
Ap3s1-204ENSMUST00000225520 Tarbp1E9Q368 1579 aa28.42■■■□□ 2.14
Ap3s1-204ENSMUST00000225520 Tecpr2Q3UH45 1423 aa28.42■■■□□ 2.14
Ap3s1-204ENSMUST00000225520 PtprgQ05909 1442 aa28.4■■■□□ 2.14
Ap3s1-204ENSMUST00000225520 Setd1aE9PYH6 1716 aa28.4■■■□□ 2.14
Ap3s1-204ENSMUST00000225520 PzpQ61838 1495 aa28.4■■■□□ 2.14
Ap3s1-204ENSMUST00000225520 Uggt1Q6P5E4 1551 aa28.39■■■□□ 2.14
Ap3s1-204ENSMUST00000225520 Erich6D3Z6S9 713 aa28.37■■■□□ 2.13
Ap3s1-204ENSMUST00000225520 Zc3h13E9Q784 1729 aaKnown RBP28.37■■■□□ 2.13
Ap3s1-204ENSMUST00000225520 Med1Q925J9 1575 aa28.37■■■□□ 2.13
Ap3s1-204ENSMUST00000225520 Myo3aQ8K3H5 1613 aa28.36■■■□□ 2.13
Ap3s1-204ENSMUST00000225520 Gemin5Q8BX17 1502 aaKnown RBP28.36■■■□□ 2.13
Ap3s1-204ENSMUST00000225520 Ecm2Q5FW85 670 aa28.35■■■□□ 2.13
Ap3s1-204ENSMUST00000225520 Txndc2Q6P902 515 aa28.35■■■□□ 2.13
Ap3s1-204ENSMUST00000225520 Trak1Q6PD31 939 aa28.34■■■□□ 2.13
Ap3s1-204ENSMUST00000225520 PplQ9R269 1755 aa28.34■■■□□ 2.13
Ap3s1-204ENSMUST00000225520 Ehbp1l1Q99MS7 1716 aa28.33■■■□□ 2.13
Ap3s1-204ENSMUST00000225520 Atp7aQ64430 1491 aa28.32■■■□□ 2.12
Ap3s1-204ENSMUST00000225520 Kif21bQ9QXL1 1668 aa28.32■■■□□ 2.12
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms