RNA–Protein interactions for RNA: ENSMUST00000225520.1

Ap3s1-204, Transcript of AP-3 complex subunit sigma-1, mousemouse

BASIC

Gene Ap3s1, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1-204ENSMUST00000225520 Gm35339A0A140LHH9 1649 aa43.88■■■■■ 4.62
Ap3s1-204ENSMUST00000225520 NischQ80TM9 1593 aa43.13■■■■■ 4.5
Ap3s1-204ENSMUST00000225520 Abcc9P70170 1546 aa41.76■■■■■ 4.28
Ap3s1-204ENSMUST00000225520 Abcc8B2RUS7 1588 aa41.75■■■■■ 4.27
Ap3s1-204ENSMUST00000225520 ScribQ80U72 1612 aa40.48■■■■■ 4.07
Ap3s1-204ENSMUST00000225520 Kdm5dQ62240 1548 aa39.03■■■■□ 3.84
Ap3s1-204ENSMUST00000225520 NacadQ5SWP3 1504 aa39.02■■■■□ 3.84
Ap3s1-204ENSMUST00000225520 Dcaf1Q80TR8 1506 aa38.35■■■■□ 3.73
Ap3s1-204ENSMUST00000225520 Sycp2Q9CUU3 1500 aa38.29■■■■□ 3.72
Ap3s1-204ENSMUST00000225520 BicraF8VPZ9 1578 aa37.87■■■■□ 3.65
Ap3s1-204ENSMUST00000225520 Rb1cc1Q9ESK9 1588 aa37.63■■■■□ 3.61
Ap3s1-204ENSMUST00000225520 Ccdc180J3QNE4 1664 aa37.05■■■■□ 3.52
Ap3s1-204ENSMUST00000225520 Baz1aO88379 1555 aa37.04■■■■□ 3.52
Ap3s1-204ENSMUST00000225520 Dnajc5bQ9CQ94 199 aa36.97■■■■□ 3.51
Ap3s1-204ENSMUST00000225520 Rhox8Q6VSS7 320 aa36.96■■■■□ 3.51
Ap3s1-204ENSMUST00000225520 Crybg2B7ZCC2 1516 aa36.8■■■■□ 3.48
Ap3s1-204ENSMUST00000225520 Pds5bQ4VA53 1446 aaKnown RBP36.69■■■■□ 3.46
Ap3s1-204ENSMUST00000225520 Thoc2B1AZI6 1594 aaKnown RBP36.61■■■■□ 3.45
Ap3s1-204ENSMUST00000225520 Zcchc6Q5BLK4 1491 aaKnown RBP36.5■■■■□ 3.43
Ap3s1-204ENSMUST00000225520 Atad2bE9Q166 1460 aaKnown RBP36.34■■■■□ 3.41
Ap3s1-204ENSMUST00000225520 Smarca4Q3TKT4 1613 aaKnown RBP36.06■■■■□ 3.36
Ap3s1-204ENSMUST00000225520 Cc2d2aQ8CFW7 1633 aa36■■■■□ 3.35
Ap3s1-204ENSMUST00000225520 Smarca2Q6DIC0 1577 aa35.98■■■■□ 3.35
Ap3s1-204ENSMUST00000225520 Ercc6F8VPZ5 1481 aa35.98■■■■□ 3.35
Ap3s1-204ENSMUST00000225520 Iqgap2Q3UQ44 1575 aa35.89■■■■□ 3.34
Ap3s1-204ENSMUST00000225520 Cecr2E9Q2Z1 1453 aa35.89■■■■□ 3.34
Ap3s1-204ENSMUST00000225520 Fam135aQ6NS59 1506 aa35.71■■■■□ 3.31
Ap3s1-204ENSMUST00000225520 Wdr62Q3U3T8 1523 aa35.62■■■■□ 3.29
Ap3s1-204ENSMUST00000225520 Frmpd1A2AKB4 1549 aa35.52■■■■□ 3.28
Ap3s1-204ENSMUST00000225520 Rtl1Q7M732 1744 aa35.39■■■■□ 3.26
Ap3s1-204ENSMUST00000225520 Phldb1Q6PDH0 1371 aaKnown RBP35.27■■■■□ 3.24
Ap3s1-204ENSMUST00000225520 Unc13aQ4KUS2 1712 aa35.26■■■■□ 3.23
Ap3s1-204ENSMUST00000225520 Baz1bQ9Z277 1479 aa35.15■■■■□ 3.22
Ap3s1-204ENSMUST00000225520 Cttnbp2B9EJA2 1648 aa35.07■■■■□ 3.21
Ap3s1-204ENSMUST00000225520 CftrP26361 1476 aa35.01■■■■□ 3.19
Ap3s1-204ENSMUST00000225520 Synj1Q8CHC4 1574 aa35■■■■□ 3.19
Ap3s1-204ENSMUST00000225520 Ubl4bQ9CQ84 188 aa34.91■■■■□ 3.18
Ap3s1-204ENSMUST00000225520 Mrc2Q64449 1479 aa34.82■■■■□ 3.16
Ap3s1-204ENSMUST00000225520 Brd4Q9ESU6 1400 aaKnown RBP34.81■■■■□ 3.16
Ap3s1-204ENSMUST00000225520 Ccdc136Q3TVA9 1136 aa34.62■■■■□ 3.13
Ap3s1-204ENSMUST00000225520 Esf1Q3V1V3 845 aaKnown RBP34.26■■■■□ 3.08
Ap3s1-204ENSMUST00000225520 Lrriq1Q0P5X1 1673 aa34.19■■■■□ 3.06
Ap3s1-204ENSMUST00000225520 Rsf1E9PWW9 1441 aaKnown RBP34.18■■■■□ 3.06
Ap3s1-204ENSMUST00000225520 Cux2P70298 1426 aa34.17■■■■□ 3.06
Ap3s1-204ENSMUST00000225520 Kif15Q6P9L6 1387 aa34.14■■■■□ 3.06
Ap3s1-204ENSMUST00000225520 Kif21aQ9QXL2 1672 aa34.12■■■■□ 3.05
Ap3s1-204ENSMUST00000225520 Lamc3Q9R0B6 1581 aa34.06■■■■□ 3.04
Ap3s1-204ENSMUST00000225520 Trim41Q5NCC3 630 aa33.99■■■■□ 3.03
Ap3s1-204ENSMUST00000225520 TnnQ80Z71 1560 aa33.69■■■□□ 2.98
Ap3s1-204ENSMUST00000225520 Npm1Q61937 292 aaKnown RBP33.69■■■□□ 2.98
Ap3s1-204ENSMUST00000225520 Eif4g3Q80XI3 1579 aaKnown RBP33.68■■■□□ 2.98
Ap3s1-204ENSMUST00000225520 Top2bQ64511 1612 aa33.68■■■□□ 2.98
Ap3s1-204ENSMUST00000225520 Cep164Q5DU05 1446 aa33.64■■■□□ 2.98
Ap3s1-204ENSMUST00000225520 Golga3P55937 1487 aa33.56■■■□□ 2.96
Ap3s1-204ENSMUST00000225520 Dnajc5P60904 198 aa33.54■■■□□ 2.96
Ap3s1-204ENSMUST00000225520 Ccdc18Q640L5 1455 aa33.48■■■□□ 2.95
Ap3s1-204ENSMUST00000225520 Urb2E9Q7L1 1524 aaKnown RBP33.48■■■□□ 2.95
Ap3s1-204ENSMUST00000225520 Camsap1A2AHC3 1581 aa33.47■■■□□ 2.95
Ap3s1-204ENSMUST00000225520 Dhx29Q6PGC1 1365 aaKnown RBP33.44■■■□□ 2.94
Ap3s1-204ENSMUST00000225520 Il27Q8K3I6 234 aa33.39■■■□□ 2.94
Ap3s1-204ENSMUST00000225520 Plb1Q3TTY0 1478 aa33.38■■■□□ 2.93
Ap3s1-204ENSMUST00000225520 Cngb1E1AZ71 1325 aa33.38■■■□□ 2.93
Ap3s1-204ENSMUST00000225520 Crocc2F6XLV1 1638 aa33.38■■■□□ 2.93
Ap3s1-204ENSMUST00000225520 LrpprcQ6PB66 1392 aaKnown RBP33.33■■■□□ 2.93
Ap3s1-204ENSMUST00000225520 Shroom2A2ALU4 1481 aa33.25■■■□□ 2.91
Ap3s1-204ENSMUST00000225520 Fmn1Q05860 1466 aa33.24■■■□□ 2.91
Ap3s1-204ENSMUST00000225520 PogzQ8BZH4 1409 aaKnown RBP33.15■■■□□ 2.9
Ap3s1-204ENSMUST00000225520 Rusc2Q80U22 1514 aa33.07■■■□□ 2.89
Ap3s1-204ENSMUST00000225520 Ift140E9PY46 1464 aa33.06■■■□□ 2.88
Ap3s1-204ENSMUST00000225520 Duox2A2AQ99 1517 aa33■■■□□ 2.87
Ap3s1-204ENSMUST00000225520 Grin2bQ01097 1482 aa32.94■■■□□ 2.86
Ap3s1-204ENSMUST00000225520 Setd1bQ8CFT2 1985 aa32.89■■■□□ 2.86
Ap3s1-204ENSMUST00000225520 Samd9lQ69Z37 1561 aa32.87■■■□□ 2.85
Ap3s1-204ENSMUST00000225520 Col17a1Q07563 1470 aa32.82■■■□□ 2.84
Ap3s1-204ENSMUST00000225520 Disp1Q3TDN0 1521 aa32.81■■■□□ 2.84
Ap3s1-204ENSMUST00000225520 Pbrm1Q8BSQ9 1634 aaKnown RBP32.78■■■□□ 2.84
Ap3s1-204ENSMUST00000225520 Pabpn1Q8CCS6 302 aaKnown RBP32.76■■■□□ 2.83
Ap3s1-204ENSMUST00000225520 Nup160Q9Z0W3 1402 aaKnown RBP32.68■■■□□ 2.82
Ap3s1-204ENSMUST00000225520 Ccdc88bQ4QRL3 1481 aa32.67■■■□□ 2.82
Ap3s1-204ENSMUST00000225520 Efcab5A0JP43 1406 aa32.64■■■□□ 2.82
Ap3s1-204ENSMUST00000225520 Pelp1Q9DBD5 1123 aaKnown RBP32.62■■■□□ 2.81
Ap3s1-204ENSMUST00000225520 Top2aQ01320 1528 aaKnown RBP32.61■■■□□ 2.81
Ap3s1-204ENSMUST00000225520 Cc2d2bA0A286YDU8 1405 aa32.59■■■□□ 2.81
Ap3s1-204ENSMUST00000225520 Rad54l2Q99NG0 1466 aa32.56■■■□□ 2.8
Ap3s1-204ENSMUST00000225520 Magi3Q9EQJ9 1476 aa32.51■■■□□ 2.79
Ap3s1-204ENSMUST00000225520 Zcchc11B2RX14 1644 aaKnown RBP32.5■■■□□ 2.79
Ap3s1-204ENSMUST00000225520 Grin2aP35436 1464 aa32.49■■■□□ 2.79
Ap3s1-204ENSMUST00000225520 NrkQ9R0G8 1455 aa32.49■■■□□ 2.79
Ap3s1-204ENSMUST00000225520 AqrQ8CFQ3 1481 aaKnown RBP32.42■■■□□ 2.78
Ap3s1-204ENSMUST00000225520 Shroom4Q1W617 1475 aa32.37■■■□□ 2.77
Ap3s1-204ENSMUST00000225520 PtprkP35822 1457 aa32.36■■■□□ 2.77
Ap3s1-204ENSMUST00000225520 Chic1Q8CBW7 227 aa32.34■■■□□ 2.77
Ap3s1-204ENSMUST00000225520 Gpatch8A2A6A1 1505 aa32.34■■■□□ 2.77
Ap3s1-204ENSMUST00000225520 Pla2r1Q62028 1487 aa32.3■■■□□ 2.76
Ap3s1-204ENSMUST00000225520 SynmQ70IV5 1561 aa32.3■■■□□ 2.76
Ap3s1-204ENSMUST00000225520 Fgd6Q69ZL1 1399 aa32.26■■■□□ 2.75
Ap3s1-204ENSMUST00000225520 Cep170Q6A065 1588 aa32.18■■■□□ 2.74
Ap3s1-204ENSMUST00000225520 Adgrl3Q80TS3 1537 aa32.14■■■□□ 2.74
Ap3s1-204ENSMUST00000225520 Gapvd1Q6PAR5 1458 aa32.12■■■□□ 2.73
Ap3s1-204ENSMUST00000225520 AknaQ80VW7 1404 aa32.09■■■□□ 2.73
Retrieved 100 of 22,080 RNA–protein pairs in 88.6 ms