RNA–Protein interactions for RNA: ENSMUST00000210309.1

Usp47-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp47, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-202ENSMUST00000210309 Inpp5dQ9ES52 1191 aa7.74□□□□□ -1.17
Usp47-202ENSMUST00000210309 Atp10dQ8K2X1 1416 aa7.73□□□□□ -1.17
Usp47-202ENSMUST00000210309 Utp14aQ640M1 767 aaKnown RBP7.73□□□□□ -1.17
Usp47-202ENSMUST00000210309 Smg6P61406 1418 aaKnown RBP7.73□□□□□ -1.17
Usp47-202ENSMUST00000210309 BC005561E9Q5E2 1589 aa7.73□□□□□ -1.17
Usp47-202ENSMUST00000210309 Trim30dE9PWL0 497 aa7.72□□□□□ -1.17
Usp47-202ENSMUST00000210309 Map1bP14873 2464 aaKnown RBP7.72□□□□□ -1.17
Usp47-202ENSMUST00000210309 Pank3Q8R2W9 370 aa7.72□□□□□ -1.17
Usp47-202ENSMUST00000210309 Stag3O70576 1240 aa7.72□□□□□ -1.17
Usp47-202ENSMUST00000210309 Dcaf11Q91VU6 549 aa7.72□□□□□ -1.17
Usp47-202ENSMUST00000210309 Sall3Q62255 1320 aa7.72□□□□□ -1.17
Usp47-202ENSMUST00000210309 1700019A02RikA0A087WPV9 146 aa7.71□□□□□ -1.17
Usp47-202ENSMUST00000210309 Znf710Q3U288 666 aa7.71□□□□□ -1.18
Usp47-202ENSMUST00000210309 Afap1Q80YS6 731 aa7.7□□□□□ -1.18
Usp47-202ENSMUST00000210309 Myom3A2ABU4 1439 aa7.7□□□□□ -1.18
Usp47-202ENSMUST00000210309 Zfp777B9EKF4 885 aa7.7□□□□□ -1.18
Usp47-202ENSMUST00000210309 Hsp90ab1P11499 724 aaKnown RBP7.7□□□□□ -1.18
Usp47-202ENSMUST00000210309 Lmtk2Q3TYD6 1471 aa7.7□□□□□ -1.18
Usp47-202ENSMUST00000210309 Washc2Q6PGL7 1334 aa7.7□□□□□ -1.18
Usp47-202ENSMUST00000210309 Fam184bQ0KK56 942 aa7.7□□□□□ -1.18
Usp47-202ENSMUST00000210309 Usp40Q8BWR4 1235 aa7.7□□□□□ -1.18
Usp47-202ENSMUST00000210309 Mak16Q8BGS0 296 aaKnown RBP7.7□□□□□ -1.18
Usp47-202ENSMUST00000210309 Rock2P70336 1388 aa7.7□□□□□ -1.18
Usp47-202ENSMUST00000210309 Slc4a2P13808 1237 aaKnown RBP7.7□□□□□ -1.18
Usp47-202ENSMUST00000210309 Trim44Q9QXA7 346 aa7.7□□□□□ -1.18
Usp47-202ENSMUST00000210309 PtmaP26350 111 aa7.69□□□□□ -1.18
Usp47-202ENSMUST00000210309 Neurod2Q62414 383 aa7.69□□□□□ -1.18
Usp47-202ENSMUST00000210309 Rprd2Q6NXI6 1469 aaKnown RBP7.69□□□□□ -1.18
Usp47-202ENSMUST00000210309 Puf60Q3UEB3 564 aaKnown RBP7.69□□□□□ -1.18
Usp47-202ENSMUST00000210309 Stard8Q8K031 1019 aa7.69□□□□□ -1.18
Usp47-202ENSMUST00000210309 Armcx1Q9CX83 456 aa7.69□□□□□ -1.18
Usp47-202ENSMUST00000210309 Tmf1B9EKI3 1091 aa7.69□□□□□ -1.18
Usp47-202ENSMUST00000210309 Zscan10Q3URR7 782 aa7.69□□□□□ -1.18
Usp47-202ENSMUST00000210309 Wdr43Q6ZQL4 677 aaKnown RBP7.69□□□□□ -1.18
Usp47-202ENSMUST00000210309 Arhgap5P97393 1501 aa7.69□□□□□ -1.18
Usp47-202ENSMUST00000210309 Txndc2Q6P902 515 aa7.69□□□□□ -1.18
Usp47-202ENSMUST00000210309 CanxP35564 591 aaKnown RBP7.68□□□□□ -1.18
Usp47-202ENSMUST00000210309 Rsph4aQ8BYM7 716 aa7.68□□□□□ -1.18
Usp47-202ENSMUST00000210309 Rfx7F8VPJ6 1459 aa7.67□□□□□ -1.18
Usp47-202ENSMUST00000210309 Gm6268A2A3U9 297 aa7.67□□□□□ -1.18
Usp47-202ENSMUST00000210309 Esx1O88933 382 aa7.67□□□□□ -1.18
Usp47-202ENSMUST00000210309 ErbinQ80TH2 1402 aa7.67□□□□□ -1.18
Usp47-202ENSMUST00000210309 Kif21aQ9QXL2 1672 aa7.67□□□□□ -1.18
Usp47-202ENSMUST00000210309 Q8BT18 775 aa7.67□□□□□ -1.18
Usp47-202ENSMUST00000210309 Arhgef40Q3UPH7 1517 aa7.67□□□□□ -1.18
Usp47-202ENSMUST00000210309 Plekhg5Q66T02 1073 aa7.67□□□□□ -1.18
Usp47-202ENSMUST00000210309 Rpgrip1lQ8CG73 1264 aa7.67□□□□□ -1.18
Usp47-202ENSMUST00000210309 Fancd2Q80V62 1450 aa7.66□□□□□ -1.18
Usp47-202ENSMUST00000210309 Plcb2A3KGF7 1181 aa7.66□□□□□ -1.18
Usp47-202ENSMUST00000210309 Shq1Q7TMX5 569 aa7.66□□□□□ -1.18
Usp47-202ENSMUST00000210309 Ttc21bQ0HA38 1315 aa7.66□□□□□ -1.18
Usp47-202ENSMUST00000210309 WizO88286 1684 aaKnown RBP7.66□□□□□ -1.18
Usp47-202ENSMUST00000210309 Spryd3E9Q9B3 442 aa7.66□□□□□ -1.18
Usp47-202ENSMUST00000210309 Ggt6Q6PDE7 497 aa7.66□□□□□ -1.18
Usp47-202ENSMUST00000210309 Q7TT23 1179 aa7.66□□□□□ -1.18
Usp47-202ENSMUST00000210309 Q9D9H8 365 aa7.66□□□□□ -1.18
Usp47-202ENSMUST00000210309 Znf316Q6PGE4 1016 aa7.65□□□□□ -1.18
Usp47-202ENSMUST00000210309 PnnO35691 725 aaKnown RBP7.65□□□□□ -1.19
Usp47-202ENSMUST00000210309 Pes1Q9EQ61 584 aaKnown RBP7.65□□□□□ -1.19
Usp47-202ENSMUST00000210309 Adamts12Q811B3 1600 aa7.65□□□□□ -1.19
Usp47-202ENSMUST00000210309 Dbr1Q923B1 550 aa7.65□□□□□ -1.19
Usp47-202ENSMUST00000210309 Caskin1Q6P9K8 1431 aa7.64□□□□□ -1.19
Usp47-202ENSMUST00000210309 Kdm5bQ80Y84 1544 aa7.64□□□□□ -1.19
Usp47-202ENSMUST00000210309 Mink1Q9JM52 1308 aa7.64□□□□□ -1.19
Usp47-202ENSMUST00000210309 U2af1Q9D883 239 aaKnown RBP7.63□□□□□ -1.19
Usp47-202ENSMUST00000210309 Abcc1O35379 1528 aa7.63□□□□□ -1.19
Usp47-202ENSMUST00000210309 Mapkbp1Q6NS57 1503 aa7.63□□□□□ -1.19
Usp47-202ENSMUST00000210309 Plin1Q8CGN5 517 aa7.63□□□□□ -1.19
Usp47-202ENSMUST00000210309 Ccdc9Q8VC31 543 aaKnown RBP7.62□□□□□ -1.19
Usp47-202ENSMUST00000210309 Chmp4bQ9D8B3 224 aaKnown RBP7.62□□□□□ -1.19
Usp47-202ENSMUST00000210309 Atp2b2Q9R0K7 1198 aa7.62□□□□□ -1.19
Usp47-202ENSMUST00000210309 Speer4f1Q9D5Q6 258 aa7.62□□□□□ -1.19
Usp47-202ENSMUST00000210309 Lmo7E9PYF4 1699 aaKnown RBP7.61□□□□□ -1.19
Usp47-202ENSMUST00000210309 Birc3O08863 600 aa7.61□□□□□ -1.19
Usp47-202ENSMUST00000210309 Pik3c2gO70167 1506 aa7.61□□□□□ -1.19
Usp47-202ENSMUST00000210309 PnisrA2AJT4 805 aaKnown RBP7.61□□□□□ -1.19
Usp47-202ENSMUST00000210309 Ubap1lG3UW59 384 aa7.61□□□□□ -1.19
Usp47-202ENSMUST00000210309 Iqcf3Q9D498 203 aa7.61□□□□□ -1.19
Usp47-202ENSMUST00000210309 Slc4a3P16283 1227 aa7.61□□□□□ -1.19
Usp47-202ENSMUST00000210309 Adgrb2Q8CGM1 1561 aa7.61□□□□□ -1.19
Usp47-202ENSMUST00000210309 Kif7B7ZNG0 1348 aa7.6□□□□□ -1.19
Usp47-202ENSMUST00000210309 Ssh2Q5SW75 1423 aa7.6□□□□□ -1.19
Usp47-202ENSMUST00000210309 Arhgef12Q8R4H2 1543 aaKnown RBP7.6□□□□□ -1.19
Usp47-202ENSMUST00000210309 Rapgef6Q5NCJ1 1609 aa7.6□□□□□ -1.19
Usp47-202ENSMUST00000210309 Prex2Q3LAC4 1598 aa7.6□□□□□ -1.19
Usp47-202ENSMUST00000210309 Psme1P97371 249 aa7.6□□□□□ -1.19
Usp47-202ENSMUST00000210309 Ylpm1Q9R0I7 1386 aaKnown RBP7.6□□□□□ -1.19
Usp47-202ENSMUST00000210309 Wdr7Q920I9 1489 aa7.6□□□□□ -1.19
Usp47-202ENSMUST00000210309 CrbnQ8C7D2 445 aa7.6□□□□□ -1.19
Usp47-202ENSMUST00000210309 Sh3bp5Q9Z131 463 aa7.6□□□□□ -1.19
Usp47-202ENSMUST00000210309 Rock1P70335 1354 aa7.59□□□□□ -1.19
Usp47-202ENSMUST00000210309 Golga2Q921M4 999 aa7.59□□□□□ -1.19
Usp47-202ENSMUST00000210309 Polr3aB2RXC6 1390 aa7.59□□□□□ -1.19
Usp47-202ENSMUST00000210309 Gapvd1Q6PAR5 1458 aa7.59□□□□□ -1.19
Usp47-202ENSMUST00000210309 Ncoa1P70365 1447 aa7.59□□□□□ -1.19
Usp47-202ENSMUST00000210309 PrxO55103 1391 aa7.59□□□□□ -1.19
Usp47-202ENSMUST00000210309 Mapk8ip3Q9ESN9 1337 aa7.59□□□□□ -1.19
Usp47-202ENSMUST00000210309 Senp3Q9EP97 568 aaKnown RBP7.58□□□□□ -1.2
Usp47-202ENSMUST00000210309 Atp7aQ64430 1491 aa7.58□□□□□ -1.2
Usp47-202ENSMUST00000210309 Hsp90b1P08113 802 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms