RNA–Protein interactions for RNA: ENSMUST00000209578.1

Ebf3-205, Transcript of Transcription factor COE3, mousemouse

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Gene Ebf3, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-205ENSMUST00000209578 Trak1Q6PD31 939 aa14.46□□□□□ -0.09
Ebf3-205ENSMUST00000209578 Clstn2Q9ER65 966 aa14.46□□□□□ -0.09
Ebf3-205ENSMUST00000209578 Zmym4A2A791 1549 aaKnown RBP14.46□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Kdm5cP41230 1554 aa14.46□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Supt6hQ62383 1726 aaKnown RBP14.44□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Hnrnpul2Q00PI9 745 aaKnown RBP14.44□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Qser1A2BIE1 1698 aa14.44□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Camsap2Q8C1B1 1461 aa14.43□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Adamtsl3G3UXC7 1706 aa14.43□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Yeats2Q3TUF7 1407 aa14.43□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Ptch1Q61115 1434 aa14.42□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Kif21bQ9QXL1 1668 aa14.42□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Dhx9O70133 1380 aaKnown RBP14.41□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Ercc6l2Q9JIM3 1537 aa14.41□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Dip2cE9PWR4 1557 aa14.41□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Nos1Q9Z0J4 1429 aa14.41□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Wdr66E9Q743 1299 aa14.4□□□□□ -0.1
Ebf3-205ENSMUST00000209578 PtprmP28828 1452 aa14.4□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Xrn1P97789 1719 aaKnown RBP14.4□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Kif3bQ61771 747 aa14.4□□□□□ -0.1
Ebf3-205ENSMUST00000209578 Usp47Q8BY87 1376 aa14.4□□□□□ -0.1
Ebf3-205ENSMUST00000209578 RereQ80TZ9 1558 aa14.4□□□□□ -0.11
Ebf3-205ENSMUST00000209578 Usp54Q8BL06 1588 aaKnown RBP14.39□□□□□ -0.11
Ebf3-205ENSMUST00000209578 Asxl1P59598 1514 aa14.39□□□□□ -0.11
Ebf3-205ENSMUST00000209578 Pde4cQ3UEI1 686 aa14.39□□□□□ -0.11
Ebf3-205ENSMUST00000209578 Aebp2Q9Z248 504 aaKnown RBP14.39□□□□□ -0.11
Ebf3-205ENSMUST00000209578 PtprgQ05909 1442 aa14.37□□□□□ -0.11
Ebf3-205ENSMUST00000209578 Safb2Q80YR5 991 aaKnown RBP14.37□□□□□ -0.11
Ebf3-205ENSMUST00000209578 Rprd2Q6NXI6 1469 aaKnown RBP14.37□□□□□ -0.11
Ebf3-205ENSMUST00000209578 Cd109Q8R422 1442 aa14.36□□□□□ -0.11
Ebf3-205ENSMUST00000209578 Abca17E9PX95 1733 aa14.36□□□□□ -0.11
Ebf3-205ENSMUST00000209578 Znf518aB2RRF6 1478 aaKnown RBP14.36□□□□□ -0.11
Ebf3-205ENSMUST00000209578 Naip5Q9R016 1403 aa14.36□□□□□ -0.11
Ebf3-205ENSMUST00000209578 Pik3c2gO70167 1506 aa14.36□□□□□ -0.11
Ebf3-205ENSMUST00000209578 Ppargc1bQ8VHJ7 1014 aa14.35□□□□□ -0.11
Ebf3-205ENSMUST00000209578 ShprhQ7TPQ3 1674 aa14.34□□□□□ -0.11
Ebf3-205ENSMUST00000209578 MyclP10166 368 aa14.33□□□□□ -0.12
Ebf3-205ENSMUST00000209578 Neurod1Q60867 357 aa14.33□□□□□ -0.12
Ebf3-205ENSMUST00000209578 Talpid3E9PV87 1520 aa14.33□□□□□ -0.12
Ebf3-205ENSMUST00000209578 Kif1bQ60575 1816 aaKnown RBP14.31□□□□□ -0.12
Ebf3-205ENSMUST00000209578 Atp7aQ64430 1491 aa14.3□□□□□ -0.12
Ebf3-205ENSMUST00000209578 Rgl3Q3UYI5 709 aa14.3□□□□□ -0.12
Ebf3-205ENSMUST00000209578 Gli2Q0VGT2 1544 aa14.3□□□□□ -0.12
Ebf3-205ENSMUST00000209578 Myom3A2ABU4 1439 aa14.3□□□□□ -0.12
Ebf3-205ENSMUST00000209578 Robo2Q7TPD3 1470 aa14.3□□□□□ -0.12
Ebf3-205ENSMUST00000209578 Cul9Q80TT8 1865 aa14.29□□□□□ -0.12
Ebf3-205ENSMUST00000209578 Cdc42bpgQ80UW5 1551 aa14.28□□□□□ -0.12
Ebf3-205ENSMUST00000209578 Nsd2Q8BVE8 1365 aa14.28□□□□□ -0.12
Ebf3-205ENSMUST00000209578 Naip6Q9JIB6 1403 aa14.28□□□□□ -0.12
Ebf3-205ENSMUST00000209578 Plch2A2AP18 1501 aa14.28□□□□□ -0.12
Ebf3-205ENSMUST00000209578 DroshaQ5HZJ0 1373 aaKnown RBP14.27□□□□□ -0.13
Ebf3-205ENSMUST00000209578 Ahdc1Q6PAL7 1594 aaKnown RBP14.27□□□□□ -0.13
Ebf3-205ENSMUST00000209578 Sall2Q9QX96 1004 aa14.27□□□□□ -0.13
Ebf3-205ENSMUST00000209578 Topbp1Q6ZQF0 1515 aa14.26□□□□□ -0.13
Ebf3-205ENSMUST00000209578 Myo5cE9Q1F5 1742 aa14.26□□□□□ -0.13
Ebf3-205ENSMUST00000209578 Myom2Q14BI5 1463 aa14.26□□□□□ -0.13
Ebf3-205ENSMUST00000209578 Erich6D3Z6S9 713 aa14.26□□□□□ -0.13
Ebf3-205ENSMUST00000209578 Dot1lQ6XZL8 1540 aa14.25□□□□□ -0.13
Ebf3-205ENSMUST00000209578 Ylpm1Q9R0I7 1386 aaKnown RBP14.24□□□□□ -0.13
Ebf3-205ENSMUST00000209578 ClspnQ80YR7 1315 aa14.24□□□□□ -0.13
Ebf3-205ENSMUST00000209578 Abca6Q8K441 1624 aa14.23□□□□□ -0.13
Ebf3-205ENSMUST00000209578 Trpm1Q2TV84 1622 aa14.23□□□□□ -0.13
Ebf3-205ENSMUST00000209578 Ttc21bQ0HA38 1315 aa14.23□□□□□ -0.13
Ebf3-205ENSMUST00000209578 Tarbp1E9Q368 1579 aa14.21□□□□□ -0.13
Ebf3-205ENSMUST00000209578 Uggt2E9Q4X2 1504 aa14.21□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Rock1P70335 1354 aa14.21□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Edc4Q3UJB9 1406 aaKnown RBP14.2□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Afap1Q80YS6 731 aa14.2□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Rsph4aQ8BYM7 716 aa14.2□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Hdac5Q9Z2V6 1113 aa14.2□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Prex1Q69ZK0 1650 aa14.19□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Washc2Q6PGL7 1334 aa14.19□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Cfap65Q3V0B4 1847 aa14.19□□□□□ -0.14
Ebf3-205ENSMUST00000209578 AnkarA2RT91 1465 aa14.19□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Grwd1Q810D6 446 aaKnown RBP14.18□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Ppip5k1A2ARP1 1436 aa14.18□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Gm13697A2AK42 830 aa14.17□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Tmem131lQ3U3D7 1597 aa14.17□□□□□ -0.14
Ebf3-205ENSMUST00000209578 4930407I10RikD3Z5T8 1512 aa14.16□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Mroh3A0A1D5RM54 893 aa14.15□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Bcl9Q9D219 1425 aa14.15□□□□□ -0.14
Ebf3-205ENSMUST00000209578 Stk24Q99KH8 431 aa14.14□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Dip2bQ3UH60 1574 aa14.14□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Sall3Q62255 1320 aa14.14□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Mbd5B1AYB6 1498 aa14.14□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Mug2P28666 1451 aa14.13□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Sin3aQ60520 1274 aaKnown RBP14.13□□□□□ -0.15
Ebf3-205ENSMUST00000209578 ErbinQ80TH2 1402 aa14.13□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Iqgap3F8VQ29 1632 aa14.12□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Fbxo41Q6NS60 873 aa14.12□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Dapk1Q80YE7 1442 aa14.12□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Ifit1bl1D3Z6F0 470 aa14.11□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Knl1Q66JQ7 1612 aa14.11□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Cdk13Q69ZA1 1511 aaKnown RBP14.11□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Dip2aQ8BWT5 1523 aa14.1□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Polr3aB2RXC6 1390 aa14.1□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Rundc1Q0VDN7 615 aa14.1□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Abcc6Q9R1S7 1498 aa14.09□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Cpsf1Q9EPU4 1441 aaKnown RBP14.08□□□□□ -0.15
Ebf3-205ENSMUST00000209578 Iqgap1Q9JKF1 1657 aaKnown RBP14.08□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms