RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 MlecQ6ZQI3 291 aaKnown RBP17.74■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Cd109Q8R422 1442 aa17.74■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Map3k5O35099 1380 aa17.74■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Speer4f1Q9D5Q6 258 aa17.73■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 U2af1Q9D883 239 aaKnown RBP17.73■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Golga2Q921M4 999 aa17.73■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Gm6268A2A3U9 297 aa17.73■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 NexmifQ5DTT1 1515 aa17.72■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Pank3Q8R2W9 370 aa17.72■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Ipo9Q91YE6 1041 aa17.71■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Irx6Q9ER75 438 aa17.7■□□□□ 0.42
Pcdha1-202ENSMUST00000193839 Shq1Q7TMX5 569 aa17.7■□□□□ 0.42
Pcdha1-202ENSMUST00000193839 Ankrd26Q811D2 1581 aa17.69■□□□□ 0.42
Pcdha1-202ENSMUST00000193839 Fam184bQ0KK56 942 aa17.69■□□□□ 0.42
Pcdha1-202ENSMUST00000193839 AU015836B2RUM3 263 aa17.69■□□□□ 0.42
Pcdha1-202ENSMUST00000193839 Ttll5Q8CHB8 1328 aa17.68■□□□□ 0.42
Pcdha1-202ENSMUST00000193839 Birc3O08863 600 aa17.68■□□□□ 0.42
Pcdha1-202ENSMUST00000193839 Mlh3A0A1Y7VMP7 1443 aa17.67■□□□□ 0.42
Pcdha1-202ENSMUST00000193839 Naip2Q9QUK4 1447 aa17.67■□□□□ 0.42
Pcdha1-202ENSMUST00000193839 Rtf1A2AQ19 715 aaKnown RBP17.67■□□□□ 0.42
Pcdha1-202ENSMUST00000193839 Caskin1Q6P9K8 1431 aa17.66■□□□□ 0.42
Pcdha1-202ENSMUST00000193839 A2mQ6GQT1 1474 aa17.66■□□□□ 0.42
Pcdha1-202ENSMUST00000193839 Myom3A2ABU4 1439 aa17.65■□□□□ 0.42
Pcdha1-202ENSMUST00000193839 DekQ7TNV0 380 aaKnown RBP17.64■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 Inpp5dQ9ES52 1191 aa17.64■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 Rfx7F8VPJ6 1459 aa17.62■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 1700019A02RikA0A087WPV9 146 aa17.62■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 Znf316Q6PGE4 1016 aa17.62■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 Abcc5Q9R1X5 1436 aa17.62■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 Gpatch8A2A6A1 1505 aa17.62■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 HdgfP51859 237 aaKnown RBP17.61■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 Disp1Q3TDN0 1521 aa17.61■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 Map7O88735 730 aa17.61■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 Zscan10Q3URR7 782 aa17.61■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 Ap3b2Q9JME5 1082 aa17.6■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 Sox12Q04890 314 aa17.6■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 Thoc2B1AZI6 1594 aaKnown RBP17.59■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 Rock1P70335 1354 aa17.58■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 Puf60Q3UEB3 564 aaKnown RBP17.58■□□□□ 0.41
Pcdha1-202ENSMUST00000193839 HnrnpuQ8VEK3 800 aaKnown RBP17.56■□□□□ 0.4
Pcdha1-202ENSMUST00000193839 Kif7B7ZNG0 1348 aa17.56■□□□□ 0.4
Pcdha1-202ENSMUST00000193839 Mink1Q9JM52 1308 aa17.56■□□□□ 0.4
Pcdha1-202ENSMUST00000193839 Dhx9O70133 1380 aaKnown RBP17.55■□□□□ 0.4
Pcdha1-202ENSMUST00000193839 Pla2r1Q62028 1487 aa17.55■□□□□ 0.4
Pcdha1-202ENSMUST00000193839 Dnai1Q8C0M8 701 aa17.55■□□□□ 0.4
Pcdha1-202ENSMUST00000193839 Tsen2Q6P7W5 460 aa17.54■□□□□ 0.4
Pcdha1-202ENSMUST00000193839 U2surpQ6NV83 1029 aaKnown RBP17.53■□□□□ 0.4
Pcdha1-202ENSMUST00000193839 4933402E13RikQ9D4D2 429 aa17.53■□□□□ 0.4
Pcdha1-202ENSMUST00000193839 Slx4Q6P1D7 1565 aa17.53■□□□□ 0.4
Pcdha1-202ENSMUST00000193839 Fancd2Q80V62 1450 aa17.53■□□□□ 0.4
Pcdha1-202ENSMUST00000193839 Samd9lQ69Z37 1561 aa17.53■□□□□ 0.4
Pcdha1-202ENSMUST00000193839 CrbnQ8C7D2 445 aa17.53■□□□□ 0.4
Pcdha1-202ENSMUST00000193839 Plcb2A3KGF7 1181 aa17.52■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Ccar1Q8CH18 1146 aaKnown RBP17.52■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Atp10dQ8K2X1 1416 aa17.52■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 EspnQ9ET47 871 aa17.52■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Gsto1O09131 240 aa17.51■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 PtmaP26350 111 aa17.51■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 GsdmaQ9EST1 446 aa17.51■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Plin1Q8CGN5 517 aa17.5■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 FanciQ8K368 1330 aa17.5■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 KnstrnQ9D9Z1 312 aaKnown RBP17.49■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Gm1043A0A140LJC2 1431 aa17.49■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Chmp5Q9D7S9 219 aa17.47■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Q3TQI7 289 aaKnown RBP17.47■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Ksr2Q3UVC0 959 aa17.47■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Kif21aQ9QXL2 1672 aa17.46■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Stk31Q99MW1 1018 aa17.46■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Ncoa3O09000 1398 aa17.46■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Ralbp1Q62172 648 aa17.46■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 PxdnQ3UQ28 1475 aa17.46■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Sart3Q9JLI8 962 aaKnown RBP17.46■□□□□ 0.39
Pcdha1-202ENSMUST00000193839 Tmco5bQ80X59 307 aa17.45■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Adam1bQ8R534 806 aa17.45■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Q9D9H8 365 aa17.45■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 CatipB9EKE5 520 aa17.45■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 WizO88286 1684 aaKnown RBP17.45■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 PtmsQ9D0J8 101 aaKnown RBP17.45■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 DroshaQ5HZJ0 1373 aaKnown RBP17.44■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Nolc1E9Q5C9 702 aaKnown RBP17.44■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Dbr1Q923B1 550 aa17.44■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Atp2b2Q9R0K7 1198 aa17.44■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Plekhg5Q66T02 1073 aa17.44■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Afap1Q80YS6 731 aa17.44■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Shroom2A2ALU4 1481 aa17.44■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Cabp4Q8VHC5 271 aa17.44■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Rab11fip3Q8CHD8 1047 aa17.43■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Ciz1Q8VEH2 845 aa17.43■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 OvosQ3UU35 1456 aa17.43■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Rapgef6Q5NCJ1 1609 aa17.43■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Armcx1Q9CX83 456 aa17.43■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Eif4g1Q6NZJ6 1600 aaKnown RBP17.43■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Nup160Q9Z0W3 1402 aaKnown RBP17.42■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Gtf3c3Q3TMP1 882 aa17.42■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 B4galnt3Q6L8S8 986 aa17.42■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Slc52a2Q9D8F3 450 aa17.41■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Slc4a3P16283 1227 aa17.4■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Ttc21bQ0HA38 1315 aa17.4■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 BC005561E9Q5E2 1589 aa17.4■□□□□ 0.38
Pcdha1-202ENSMUST00000193839 Eif4g2Q62448 906 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms