RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 AppP12023 770 aa15.48■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Aebp1Q640N1 1128 aa15.48■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Srcin1Q9QWI6 1250 aa15.47■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Irx3P81067 507 aa15.47■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Gpatch11Q3UFS4 262 aa15.47■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Kif3bQ61771 747 aa15.46■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Dhx57Q6P5D3 1388 aaKnown RBP15.46■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Nup155Q99P88 1391 aaKnown RBP15.46■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Odf2A3KGV1 830 aaKnown RBP15.46■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Mphosph9A6H5Y1 991 aa15.46■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Kiaa0754Q69ZZ9 979 aa15.46■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Chrna2Q91X60 512 aa15.46■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Tpm1P58771 284 aa15.45■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Paf1Q8K2T8 535 aa15.45■□□□□ 0.06
Col6a3-208ENSMUST00000188587 1700123L14RikQ3V2K7 440 aa15.45■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Smc4Q8CG47 1286 aa15.45■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Exoc6Q8R313 802 aa15.43■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Stard8Q8K031 1019 aa15.43■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Rab11fip3Q8CHD8 1047 aa15.43■□□□□ 0.06
Col6a3-208ENSMUST00000188587 CrbnQ8C7D2 445 aa15.42■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Cabp4Q8VHC5 271 aa15.42■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Polr1aO35134 1717 aaKnown RBP15.41■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Dhx16G3X8X0 1044 aaKnown RBP15.41■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Map7d2A2AG50 781 aa15.41■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Gabpb2P81069 414 aa15.4■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Stk31Q99MW1 1018 aa15.4■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Ipo9Q91YE6 1041 aa15.4■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Cabp1Q9JLK7 227 aa15.4■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Filip1lQ6P6L0 1131 aa15.4■□□□□ 0.06
Col6a3-208ENSMUST00000188587 BccipQ9CWI3 316 aa15.4■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Cspp1B2RX88 1205 aa15.4■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Ccdc43Q9CR29 222 aaKnown RBP15.4■□□□□ 0.06
Col6a3-208ENSMUST00000188587 Becn1O88597 448 aa15.39■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Utp14aQ640M1 767 aaKnown RBP15.39■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Trim30aP15533 496 aa15.39■□□□□ 0.05
Col6a3-208ENSMUST00000188587 St18Q80TY4 1045 aa15.38■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Fan1Q69ZT1 1020 aa15.38■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Rrp12Q6P5B0 1295 aaKnown RBP15.38■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Ylpm1Q9R0I7 1386 aaKnown RBP15.38■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Evc2Q8K1G2 1220 aa15.38■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Sf3a1Q8K4Z5 791 aaKnown RBP15.38■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Arid4aF8VPQ2 1261 aaKnown RBP15.37■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Rsph3aQ3UFY4 516 aa15.37■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Cgnl1Q6AW69 1298 aa15.37■□□□□ 0.05
Col6a3-208ENSMUST00000188587 SafbD3YXK2 937 aaKnown RBP15.36■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Cttnbp2B9EJA2 1648 aa15.36■□□□□ 0.05
Col6a3-208ENSMUST00000188587 A0A1L1SQF0 893 aa15.35■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Tsen2Q6P7W5 460 aa15.35■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Cplx2P84086 134 aa15.35■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Cc2d2aQ8CFW7 1633 aa15.35■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Chmp7Q8R1T1 451 aa15.35■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Nap1l3Q794H2 544 aa15.35■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Srek1Q8BZX4 494 aaKnown RBP15.34■□□□□ 0.05
Col6a3-208ENSMUST00000188587 CntlnA2AM05 1397 aa15.34■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Tceal9Q9DD24 104 aa15.34■□□□□ 0.05
Col6a3-208ENSMUST00000188587 Ccdc146E9Q9F7 977 aa15.32■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Ccp110Q7TSH4 1004 aa15.32■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Hook1Q8BIL5 728 aa15.32■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Eif2s2Q99L45 331 aaKnown RBP15.32■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Cep162Q6ZQ06 1403 aa15.32■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Ncbp3Q8BZR9 615 aaKnown RBP15.32■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Bcl11bQ99PV8 884 aa15.31■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Sh3bgrQ9WUZ7 214 aa15.31■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Fam193aQ8CGI1 1231 aaKnown RBP15.31■□□□□ 0.04
Col6a3-208ENSMUST00000188587 UvssaQ9D479 717 aa15.3■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Cplx1P63040 134 aa15.3■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Zrsr2Q62377 462 aaKnown RBP15.3■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Sin3aQ60520 1274 aaKnown RBP15.29■□□□□ 0.04
Col6a3-208ENSMUST00000188587 SlkO54988 1233 aa15.29■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Ipo7Q9EPL8 1038 aaKnown RBP15.29■□□□□ 0.04
Col6a3-208ENSMUST00000188587 PhaxQ9JJT9 385 aaKnown RBP15.29■□□□□ 0.04
Col6a3-208ENSMUST00000188587 CrcpO35427 148 aa15.28■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Glipr1l2Q9CQ35 332 aa15.28■□□□□ 0.04
Col6a3-208ENSMUST00000188587 March6Q6ZQ89 909 aa15.28■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Utp3Q9JI13 469 aaKnown RBP15.28■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Drc7Q6V3W6 876 aa15.27■□□□□ 0.04
Col6a3-208ENSMUST00000188587 Gm21190A0A0G2JGJ6 266 aa15.27■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Eva1cP58659 440 aa15.26■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Ccdc60Q8C4J0 545 aa15.26■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Ddrgk1Q80WW9 315 aa15.26■□□□□ 0.03
Col6a3-208ENSMUST00000188587 4933402E13RikQ9D4D2 429 aa15.26■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Fyb1O35601 819 aa15.26■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Rnf20Q5DTM8 973 aa15.26■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Neurod6P48986 337 aa15.25■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Ppp4r3bQ922R5 820 aa15.25■□□□□ 0.03
Col6a3-208ENSMUST00000188587 VgfQ0VGU4 617 aa15.25■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Casq1O09165 405 aa15.25■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Cc2d1aQ8K1A6 943 aa15.24■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Cux1P53564 1515 aa15.24■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Rec8Q8C5S7 591 aa15.24■□□□□ 0.03
Col6a3-208ENSMUST00000188587 WrnO09053 1401 aa15.24■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Ccdc34Q3UI66 367 aa15.24■□□□□ 0.03
Col6a3-208ENSMUST00000188587 UacaQ8CGB3 1411 aa15.24■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Cux2P70298 1426 aa15.24■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Ush1cQ9ES64 910 aa15.24■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Pank3Q8R2W9 370 aa15.23■□□□□ 0.03
Col6a3-208ENSMUST00000188587 GsdmaQ9EST1 446 aa15.23■□□□□ 0.03
Col6a3-208ENSMUST00000188587 KinQ8K339 391 aa15.22■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Shq1Q7TMX5 569 aa15.22■□□□□ 0.03
Col6a3-208ENSMUST00000188587 Gsdma3Q5Y4Y6 464 aa15.22■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms