RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 Tmf1B9EKI3 1091 aa26.6■■□□□ 1.85
Sox1-201ENSMUST00000180353 Pdia4P08003 638 aaKnown RBP26.6■■□□□ 1.85
Sox1-201ENSMUST00000180353 Golga2Q921M4 999 aa26.6■■□□□ 1.85
Sox1-201ENSMUST00000180353 Kif16bB1AVY7 1312 aa26.6■■□□□ 1.85
Sox1-201ENSMUST00000180353 Ncapd3Q6ZQK0 1506 aa26.59■■□□□ 1.85
Sox1-201ENSMUST00000180353 Cald1E9QA15 768 aaKnown RBP26.59■■□□□ 1.85
Sox1-201ENSMUST00000180353 Casq1O09165 405 aa26.58■■□□□ 1.85
Sox1-201ENSMUST00000180353 Ankrd36D3Z4K0 1415 aa26.57■■□□□ 1.84
Sox1-201ENSMUST00000180353 Cux2P70298 1426 aa26.56■■□□□ 1.84
Sox1-201ENSMUST00000180353 UacaQ8CGB3 1411 aa26.56■■□□□ 1.84
Sox1-201ENSMUST00000180353 Fez1Q8K0X8 392 aa26.56■■□□□ 1.84
Sox1-201ENSMUST00000180353 Rock2P70336 1388 aa26.54■■□□□ 1.84
Sox1-201ENSMUST00000180353 Stag3O70576 1240 aa26.52■■□□□ 1.84
Sox1-201ENSMUST00000180353 Cc2d2aQ8CFW7 1633 aa26.52■■□□□ 1.84
Sox1-201ENSMUST00000180353 Mrvi1Q9WUX5 899 aaKnown RBP26.51■■□□□ 1.83
Sox1-201ENSMUST00000180353 Plekhh2Q8C115 1491 aa26.51■■□□□ 1.83
Sox1-201ENSMUST00000180353 Top2aQ01320 1528 aaKnown RBP26.51■■□□□ 1.83
Sox1-201ENSMUST00000180353 Tnpo1Q8BFY9 898 aaKnown RBP26.51■■□□□ 1.83
Sox1-201ENSMUST00000180353 Gripap1Q8VD04 806 aa26.5■■□□□ 1.83
Sox1-201ENSMUST00000180353 SetQ9EQU5 289 aaKnown RBP26.49■■□□□ 1.83
Sox1-201ENSMUST00000180353 KarsQ99MN1 595 aaKnown RBP26.49■■□□□ 1.83
Sox1-201ENSMUST00000180353 Ccdc173A0JLY1 547 aa26.49■■□□□ 1.83
Sox1-201ENSMUST00000180353 Podxl2Q8CAE9 603 aa26.48■■□□□ 1.83
Sox1-201ENSMUST00000180353 Rock1P70335 1354 aa26.48■■□□□ 1.83
Sox1-201ENSMUST00000180353 Atp6v1dP57746 247 aa26.48■■□□□ 1.83
Sox1-201ENSMUST00000180353 Nup155Q99P88 1391 aaKnown RBP26.47■■□□□ 1.83
Sox1-201ENSMUST00000180353 Vgll3P85442 326 aa26.47■■□□□ 1.83
Sox1-201ENSMUST00000180353 Kif4P33174 1231 aa26.46■■□□□ 1.83
Sox1-201ENSMUST00000180353 Ralbp1Q62172 648 aa26.44■■□□□ 1.82
Sox1-201ENSMUST00000180353 Ssh1Q76I79 1042 aa26.44■■□□□ 1.82
Sox1-201ENSMUST00000180353 Atad2bE9Q166 1460 aaKnown RBP26.44■■□□□ 1.82
Sox1-201ENSMUST00000180353 Dcaf11Q91VU6 549 aa26.42■■□□□ 1.82
Sox1-201ENSMUST00000180353 CgnP59242 1191 aa26.41■■□□□ 1.82
Sox1-201ENSMUST00000180353 Gtf2e1Q9D0D5 440 aa26.41■■□□□ 1.82
Sox1-201ENSMUST00000180353 Smarce1O54941 411 aaKnown RBP26.41■■□□□ 1.82
Sox1-201ENSMUST00000180353 Plppr3Q7TPB0 716 aa26.4■■□□□ 1.82
Sox1-201ENSMUST00000180353 Sf3a1Q8K4Z5 791 aaKnown RBP26.4■■□□□ 1.82
Sox1-201ENSMUST00000180353 Zfp777B9EKF4 885 aa26.4■■□□□ 1.82
Sox1-201ENSMUST00000180353 Atl3Q91YH5 541 aa26.4■■□□□ 1.82
Sox1-201ENSMUST00000180353 Tpd52l1O54818 204 aa26.39■■□□□ 1.82
Sox1-201ENSMUST00000180353 Arap1Q4LDD4 1452 aa26.39■■□□□ 1.82
Sox1-201ENSMUST00000180353 Znf330Q922H9 316 aa26.39■■□□□ 1.82
Sox1-201ENSMUST00000180353 Slc4a1apE9PX68 744 aa26.39■■□□□ 1.81
Sox1-201ENSMUST00000180353 Pnmal2G3X9N3 661 aa26.39■■□□□ 1.81
Sox1-201ENSMUST00000180353 Ksr2Q3UVC0 959 aa26.39■■□□□ 1.81
Sox1-201ENSMUST00000180353 Ccar1Q8CH18 1146 aaKnown RBP26.38■■□□□ 1.81
Sox1-201ENSMUST00000180353 Naip1Q9QWK5 1403 aa26.38■■□□□ 1.81
Sox1-201ENSMUST00000180353 PnnO35691 725 aaKnown RBP26.38■■□□□ 1.81
Sox1-201ENSMUST00000180353 Trim58Q5NCC9 485 aa26.38■■□□□ 1.81
Sox1-201ENSMUST00000180353 Tomm22Q9CPQ3 142 aa26.37■■□□□ 1.81
Sox1-201ENSMUST00000180353 Srcin1Q9QWI6 1250 aa26.37■■□□□ 1.81
Sox1-201ENSMUST00000180353 Pank3Q8R2W9 370 aa26.37■■□□□ 1.81
Sox1-201ENSMUST00000180353 Sptbn5F6UCX4 1208 aa26.37■■□□□ 1.81
Sox1-201ENSMUST00000180353 EzrP26040 586 aaKnown RBP26.37■■□□□ 1.81
Sox1-201ENSMUST00000180353 Esx1O88933 382 aa26.37■■□□□ 1.81
Sox1-201ENSMUST00000180353 Zfp444Q3TDV8 331 aaKnown RBP26.36■■□□□ 1.81
Sox1-201ENSMUST00000180353 Tmco5bQ80X59 307 aa26.36■■□□□ 1.81
Sox1-201ENSMUST00000180353 Rpgrip1lQ8CG73 1264 aa26.36■■□□□ 1.81
Sox1-201ENSMUST00000180353 Irx6Q9ER75 438 aa26.36■■□□□ 1.81
Sox1-201ENSMUST00000180353 Utp3Q9JI13 469 aaKnown RBP26.36■■□□□ 1.81
Sox1-201ENSMUST00000180353 St18Q80TY4 1045 aa26.35■■□□□ 1.81
Sox1-201ENSMUST00000180353 Znf771Q8BJ90 317 aa26.34■■□□□ 1.81
Sox1-201ENSMUST00000180353 Dapk1Q80YE7 1442 aa26.34■■□□□ 1.81
Sox1-201ENSMUST00000180353 Anp32eP97822 260 aaKnown RBP26.34■■□□□ 1.81
Sox1-201ENSMUST00000180353 Mcm4P49717 862 aa26.34■■□□□ 1.81
Sox1-201ENSMUST00000180353 Rnf214Q8BFU3 668 aaKnown RBP26.33■■□□□ 1.81
Sox1-201ENSMUST00000180353 Vps8Q0P5W1 1427 aa26.33■■□□□ 1.81
Sox1-201ENSMUST00000180353 LrpprcQ6PB66 1392 aaKnown RBP26.33■■□□□ 1.81
Sox1-201ENSMUST00000180353 L3mbtl2P59178 703 aa26.33■■□□□ 1.81
Sox1-201ENSMUST00000180353 Ppp2r3aB2RXC8 1150 aa26.32■■□□□ 1.8
Sox1-201ENSMUST00000180353 U2af1Q9D883 239 aaKnown RBP26.32■■□□□ 1.8
Sox1-201ENSMUST00000180353 1700019A02RikA0A087WPV9 146 aa26.31■■□□□ 1.8
Sox1-201ENSMUST00000180353 Inpp5dQ9ES52 1191 aa26.31■■□□□ 1.8
Sox1-201ENSMUST00000180353 PogkQ80TC5 607 aa26.31■■□□□ 1.8
Sox1-201ENSMUST00000180353 Gse1Q3U3C9 1213 aa26.3■■□□□ 1.8
Sox1-201ENSMUST00000180353 Cgnl1Q6AW69 1298 aa26.3■■□□□ 1.8
Sox1-201ENSMUST00000180353 Plekhh1Q80TI1 1356 aa26.3■■□□□ 1.8
Sox1-201ENSMUST00000180353 Egfem1Q8C088 590 aa26.3■■□□□ 1.8
Sox1-201ENSMUST00000180353 Shroom4Q1W617 1475 aa26.29■■□□□ 1.8
Sox1-201ENSMUST00000180353 Tex2Q6ZPJ0 1128 aaKnown RBP26.28■■□□□ 1.8
Sox1-201ENSMUST00000180353 Samd1D3YXK1 519 aa26.28■■□□□ 1.8
Sox1-201ENSMUST00000180353 NcapgE9PWG6 1004 aa26.28■■□□□ 1.8
Sox1-201ENSMUST00000180353 Ecm2Q5FW85 670 aa26.28■■□□□ 1.8
Sox1-201ENSMUST00000180353 Filip1lQ6P6L0 1131 aa26.26■■□□□ 1.79
Sox1-201ENSMUST00000180353 Tpm3P21107 285 aaKnown RBP26.25■■□□□ 1.79
Sox1-201ENSMUST00000180353 Pes1Q9EQ61 584 aaKnown RBP26.25■■□□□ 1.79
Sox1-201ENSMUST00000180353 Iqgap2Q3UQ44 1575 aa26.24■■□□□ 1.79
Sox1-201ENSMUST00000180353 R3hcc1Q8BSI6 488 aa26.23■■□□□ 1.79
Sox1-201ENSMUST00000180353 Ccdc146E9Q9F7 977 aa26.23■■□□□ 1.79
Sox1-201ENSMUST00000180353 Cbx1P83917 185 aaKnown RBP26.22■■□□□ 1.79
Sox1-201ENSMUST00000180353 Dixdc1Q80Y83 711 aa26.22■■□□□ 1.79
Sox1-201ENSMUST00000180353 Arhgef5E9Q7D5 1581 aa26.21■■□□□ 1.79
Sox1-201ENSMUST00000180353 Dhx57Q6P5D3 1388 aaKnown RBP26.21■■□□□ 1.79
Sox1-201ENSMUST00000180353 Zfp644E9QA22 1323 aa26.21■■□□□ 1.79
Sox1-201ENSMUST00000180353 Ccdc30Q8BVF4 654 aa26.21■■□□□ 1.79
Sox1-201ENSMUST00000180353 Cwc15Q9JHS9 229 aaKnown RBP26.21■■□□□ 1.79
Sox1-201ENSMUST00000180353 Phldb1Q6PDH0 1371 aaKnown RBP26.2■■□□□ 1.78
Sox1-201ENSMUST00000180353 Cdkn1cP49919 348 aa26.2■■□□□ 1.78
Sox1-201ENSMUST00000180353 Pank1Q8K4K6 548 aa26.2■■□□□ 1.78
Sox1-201ENSMUST00000180353 Ppp1r9bQ6R891 817 aaKnown RBP26.19■■□□□ 1.78
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms