RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 Rassf8Q8CJ96 419 aa13.27□□□□□ -0.29
Nup50-201ENSMUST00000165443 Stk26Q99JT2 416 aa13.26□□□□□ -0.29
Nup50-201ENSMUST00000165443 Spag9Q58A65 1321 aaKnown RBP13.26□□□□□ -0.29
Nup50-201ENSMUST00000165443 Iffo2Q8R2V2 512 aa13.26□□□□□ -0.29
Nup50-201ENSMUST00000165443 Slc4a1apE9PX68 744 aa13.26□□□□□ -0.29
Nup50-201ENSMUST00000165443 CrbnQ8C7D2 445 aa13.26□□□□□ -0.29
Nup50-201ENSMUST00000165443 Ccnb3Q810T2 1396 aa13.24□□□□□ -0.29
Nup50-201ENSMUST00000165443 Nolc1E9Q5C9 702 aaKnown RBP13.24□□□□□ -0.29
Nup50-201ENSMUST00000165443 MecomP14404 1042 aa13.24□□□□□ -0.29
Nup50-201ENSMUST00000165443 RdxP26043 583 aaKnown RBP13.24□□□□□ -0.29
Nup50-201ENSMUST00000165443 Dnajc5bQ9CQ94 199 aa13.24□□□□□ -0.29
Nup50-201ENSMUST00000165443 Anapc15P60007 132 aa13.23□□□□□ -0.29
Nup50-201ENSMUST00000165443 Birc3O08863 600 aa13.23□□□□□ -0.29
Nup50-201ENSMUST00000165443 Mroh2bQ7M6Y6 1581 aa13.23□□□□□ -0.29
Nup50-201ENSMUST00000165443 AknaQ80VW7 1404 aa13.23□□□□□ -0.29
Nup50-201ENSMUST00000165443 Usp47Q8BY87 1376 aa13.22□□□□□ -0.29
Nup50-201ENSMUST00000165443 CenpjQ569L8 1344 aa13.21□□□□□ -0.29
Nup50-201ENSMUST00000165443 Cspp1B2RX88 1205 aa13.21□□□□□ -0.29
Nup50-201ENSMUST00000165443 Rsph3aQ3UFY4 516 aa13.21□□□□□ -0.29
Nup50-201ENSMUST00000165443 Kif3bQ61771 747 aa13.21□□□□□ -0.29
Nup50-201ENSMUST00000165443 Rock1P70335 1354 aa13.21□□□□□ -0.3
Nup50-201ENSMUST00000165443 Cald1E9QA15 768 aaKnown RBP13.21□□□□□ -0.3
Nup50-201ENSMUST00000165443 Ralbp1Q62172 648 aa13.21□□□□□ -0.3
Nup50-201ENSMUST00000165443 Arid3cA6PWV5 409 aa13.2□□□□□ -0.3
Nup50-201ENSMUST00000165443 Znf330Q922H9 316 aa13.2□□□□□ -0.3
Nup50-201ENSMUST00000165443 Glipr1l2Q9CQ35 332 aa13.2□□□□□ -0.3
Nup50-201ENSMUST00000165443 CgnP59242 1191 aa13.2□□□□□ -0.3
Nup50-201ENSMUST00000165443 Mre11Q61216 706 aa13.2□□□□□ -0.3
Nup50-201ENSMUST00000165443 Dnai2A2AC93 623 aa13.2□□□□□ -0.3
Nup50-201ENSMUST00000165443 Pank3Q8R2W9 370 aa13.2□□□□□ -0.3
Nup50-201ENSMUST00000165443 Unc13aQ4KUS2 1712 aa13.19□□□□□ -0.3
Nup50-201ENSMUST00000165443 Tpm3-rs7D3Z2H9 248 aa13.19□□□□□ -0.3
Nup50-201ENSMUST00000165443 GorabQ8BRM2 368 aa13.19□□□□□ -0.3
Nup50-201ENSMUST00000165443 MyclP10166 368 aa13.19□□□□□ -0.3
Nup50-201ENSMUST00000165443 Nol10Q5RJG1 687 aaKnown RBP13.19□□□□□ -0.3
Nup50-201ENSMUST00000165443 Ylpm1Q9R0I7 1386 aaKnown RBP13.19□□□□□ -0.3
Nup50-201ENSMUST00000165443 Sart1Q9Z315 806 aaKnown RBP13.18□□□□□ -0.3
Nup50-201ENSMUST00000165443 Becn1O88597 448 aa13.18□□□□□ -0.3
Nup50-201ENSMUST00000165443 Plin1Q8CGN5 517 aa13.18□□□□□ -0.3
Nup50-201ENSMUST00000165443 ChgaP26339 463 aaKnown RBP13.17□□□□□ -0.3
Nup50-201ENSMUST00000165443 VgfQ0VGU4 617 aa13.17□□□□□ -0.3
Nup50-201ENSMUST00000165443 Tsen2Q6P7W5 460 aa13.17□□□□□ -0.3
Nup50-201ENSMUST00000165443 Clstn1Q9EPL2 979 aa13.16□□□□□ -0.3
Nup50-201ENSMUST00000165443 Psme1P97371 249 aa13.16□□□□□ -0.3
Nup50-201ENSMUST00000165443 Ankrd36D3Z4K0 1415 aa13.16□□□□□ -0.3
Nup50-201ENSMUST00000165443 Fam184bQ0KK56 942 aa13.15□□□□□ -0.3
Nup50-201ENSMUST00000165443 HdgfP51859 237 aaKnown RBP13.15□□□□□ -0.3
Nup50-201ENSMUST00000165443 Fan1Q69ZT1 1020 aa13.15□□□□□ -0.3
Nup50-201ENSMUST00000165443 Ppp1r18Q8BQ30 594 aa13.14□□□□□ -0.31
Nup50-201ENSMUST00000165443 SlkO54988 1233 aa13.14□□□□□ -0.31
Nup50-201ENSMUST00000165443 Gtf3c3Q3TMP1 882 aa13.13□□□□□ -0.31
Nup50-201ENSMUST00000165443 Ciz1Q8VEH2 845 aa13.13□□□□□ -0.31
Nup50-201ENSMUST00000165443 Rad54l2Q99NG0 1466 aa13.13□□□□□ -0.31
Nup50-201ENSMUST00000165443 Ush1cQ9ES64 910 aa13.13□□□□□ -0.31
Nup50-201ENSMUST00000165443 St18Q80TY4 1045 aa13.13□□□□□ -0.31
Nup50-201ENSMUST00000165443 GsdmaQ9EST1 446 aa13.13□□□□□ -0.31
Nup50-201ENSMUST00000165443 Inpp5dQ9ES52 1191 aa13.13□□□□□ -0.31
Nup50-201ENSMUST00000165443 Txndc2Q6P902 515 aa13.12□□□□□ -0.31
Nup50-201ENSMUST00000165443 Stk31Q99MW1 1018 aa13.12□□□□□ -0.31
Nup50-201ENSMUST00000165443 Trim58Q5NCC9 485 aa13.12□□□□□ -0.31
Nup50-201ENSMUST00000165443 AqrQ8CFQ3 1481 aaKnown RBP13.12□□□□□ -0.31
Nup50-201ENSMUST00000165443 Crocc2F6XLV1 1638 aa13.12□□□□□ -0.31
Nup50-201ENSMUST00000165443 Kiaa0754Q69ZZ9 979 aa13.11□□□□□ -0.31
Nup50-201ENSMUST00000165443 Brpf1B2RRD7 1212 aa13.11□□□□□ -0.31
Nup50-201ENSMUST00000165443 Kif16bB1AVY7 1312 aa13.11□□□□□ -0.31
Nup50-201ENSMUST00000165443 Ccdc60Q8C4J0 545 aa13.11□□□□□ -0.31
Nup50-201ENSMUST00000165443 Dapk1Q80YE7 1442 aa13.11□□□□□ -0.31
Nup50-201ENSMUST00000165443 G3bp1P97855 465 aaKnown RBP13.1□□□□□ -0.31
Nup50-201ENSMUST00000165443 Utp14aQ640M1 767 aaKnown RBP13.1□□□□□ -0.31
Nup50-201ENSMUST00000165443 Atl3Q91YH5 541 aa13.1□□□□□ -0.31
Nup50-201ENSMUST00000165443 Polr1aO35134 1717 aaKnown RBP13.1□□□□□ -0.31
Nup50-201ENSMUST00000165443 Trim30aP15533 496 aa13.1□□□□□ -0.31
Nup50-201ENSMUST00000165443 Zscan10Q3URR7 782 aa13.1□□□□□ -0.31
Nup50-201ENSMUST00000165443 Urb2E9Q7L1 1524 aaKnown RBP13.1□□□□□ -0.31
Nup50-201ENSMUST00000165443 Ccdc146E9Q9F7 977 aa13.1□□□□□ -0.31
Nup50-201ENSMUST00000165443 Filip1lQ6P6L0 1131 aa13.1□□□□□ -0.31
Nup50-201ENSMUST00000165443 Znf316Q6PGE4 1016 aa13.1□□□□□ -0.31
Nup50-201ENSMUST00000165443 Tnnt1O88346 262 aa13.09□□□□□ -0.31
Nup50-201ENSMUST00000165443 Casq1O09165 405 aa13.09□□□□□ -0.31
Nup50-201ENSMUST00000165443 CrebrfQ8CDG5 640 aaKnown RBP13.09□□□□□ -0.31
Nup50-201ENSMUST00000165443 Arap1Q4LDD4 1452 aa13.08□□□□□ -0.32
Nup50-201ENSMUST00000165443 Rab11fip3Q8CHD8 1047 aa13.08□□□□□ -0.32
Nup50-201ENSMUST00000165443 Sf3a1Q8K4Z5 791 aaKnown RBP13.08□□□□□ -0.32
Nup50-201ENSMUST00000165443 Kif7B7ZNG0 1348 aa13.08□□□□□ -0.32
Nup50-201ENSMUST00000165443 Prkrip1Q9CWV6 186 aaKnown RBP13.08□□□□□ -0.32
Nup50-201ENSMUST00000165443 Plb1Q3TTY0 1478 aa13.08□□□□□ -0.32
Nup50-201ENSMUST00000165443 SynmQ70IV5 1561 aa13.07□□□□□ -0.32
Nup50-201ENSMUST00000165443 Ccer1Q9CQL2 403 aa13.07□□□□□ -0.32
Nup50-201ENSMUST00000165443 Usp40Q8BWR4 1235 aa13.07□□□□□ -0.32
Nup50-201ENSMUST00000165443 WrnO09053 1401 aa13.06□□□□□ -0.32
Nup50-201ENSMUST00000165443 Rabep1O35551 862 aa13.05□□□□□ -0.32
Nup50-201ENSMUST00000165443 Esx1O88933 382 aa13.05□□□□□ -0.32
Nup50-201ENSMUST00000165443 Ak7Q9D2H2 614 aa13.05□□□□□ -0.32
Nup50-201ENSMUST00000165443 Gprasp1Q5U4C1 1347 aa13.05□□□□□ -0.32
Nup50-201ENSMUST00000165443 Arhgef5E9Q7D5 1581 aa13.05□□□□□ -0.32
Nup50-201ENSMUST00000165443 Nap1l3Q794H2 544 aa13.04□□□□□ -0.32
Nup50-201ENSMUST00000165443 Map7d2A2AG50 781 aa13.04□□□□□ -0.32
Nup50-201ENSMUST00000165443 Tpm3P21107 285 aaKnown RBP13.04□□□□□ -0.32
Nup50-201ENSMUST00000165443 Chmp3Q9CQ10 224 aa13.04□□□□□ -0.32
Nup50-201ENSMUST00000165443 Pibf1E9Q6K3 756 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms