RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Dixdc1Q80Y83 711 aa9.39□□□□□ -0.91
Ccdc38-203ENSMUST00000132214 Il27Q8K3I6 234 aa9.39□□□□□ -0.91
Ccdc38-203ENSMUST00000132214 Apbb1Q9QXJ1 710 aa9.39□□□□□ -0.91
Ccdc38-203ENSMUST00000132214 Ift140E9PY46 1464 aa9.39□□□□□ -0.91
Ccdc38-203ENSMUST00000132214 Crocc2F6XLV1 1638 aa9.39□□□□□ -0.91
Ccdc38-203ENSMUST00000132214 Gm45233A0A0N4SVE0 221 aa9.39□□□□□ -0.91
Ccdc38-203ENSMUST00000132214 Recql4Q75NR7 1216 aaKnown RBP9.39□□□□□ -0.91
Ccdc38-203ENSMUST00000132214 LrpprcQ6PB66 1392 aaKnown RBP9.38□□□□□ -0.91
Ccdc38-203ENSMUST00000132214 LipiF6YQT7 476 aa9.37□□□□□ -0.91
Ccdc38-203ENSMUST00000132214 Pkd2O35245 966 aa9.36□□□□□ -0.91
Ccdc38-203ENSMUST00000132214 Aldh16a1Q571I9 802 aa9.36□□□□□ -0.91
Ccdc38-203ENSMUST00000132214 Zranb1Q7M760 708 aa9.33□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Jph4Q80WT0 628 aa9.33□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Ankrd65F6YK91 380 aa9.32□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Hs1bp3Q3TC93 395 aa9.32□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Clec2iQ9WVF9 217 aa9.32□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Arhgef5E9Q7D5 1581 aa9.32□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Plcd3Q8K2J0 785 aa9.32□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Pcdh10E9PXQ7 1057 aa9.31□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Actn4P57780 912 aaKnown RBP9.31□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 PogzQ8BZH4 1409 aaKnown RBP9.31□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Camsap1A2AHC3 1581 aa9.31□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 TnnQ80Z71 1560 aa9.31□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Prr29B1ARI9 187 aa9.3□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Adgrl3Q80TS3 1537 aa9.3□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Phox2bO35690 314 aa9.29□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Prrt3Q6PE13 971 aa9.29□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 AW822073A0A0N4SUK1 652 aa9.28□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Eif5bQ05D44 1216 aaKnown RBP9.28□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Ccdc9Q8VC31 543 aaKnown RBP9.28□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Mnx1Q9QZW9 404 aa9.28□□□□□ -0.92
Ccdc38-203ENSMUST00000132214 Kcnn1Q9EQR3 537 aa9.27□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Golga3P55937 1487 aa9.27□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Gm38655A0A286YDK6 273 aa9.26□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Skiv2lQ6NZR5 1244 aa9.25□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 PtprkP35822 1457 aa9.25□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Cc2d2bA0A286YDU8 1405 aa9.25□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Adra2bP30545 450 aa9.25□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Hic1Q9R1Y5 733 aa9.25□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Duox2A2AQ99 1517 aa9.24□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Disp1Q3TDN0 1521 aa9.24□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 GnpatP98192 678 aa9.24□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Zbtb7cQ8VCZ7 619 aa9.23□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 TraipQ8VIG6 470 aa9.23□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Rnf25Q9QZR0 456 aa9.23□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Kiaa1211Q5PR69 1207 aa9.23□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Cep170Q6A065 1588 aa9.22□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Fchsd2Q3USJ8 740 aa9.22□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Nup160Q9Z0W3 1402 aaKnown RBP9.22□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Gapvd1Q6PAR5 1458 aa9.21□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 PtprtQ99M80 1454 aa9.21□□□□□ -0.93
Ccdc38-203ENSMUST00000132214 Gtf3c3Q3TMP1 882 aa9.21□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Lrfn2Q80TG9 788 aa9.21□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Chst12Q99LL3 419 aa9.21□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Pbrm1Q8BSQ9 1634 aaKnown RBP9.21□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Ccdc88bQ4QRL3 1481 aa9.2□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Gm156Q58A37 223 aa9.2□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Fgd6Q69ZL1 1399 aa9.2□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Trbv21A0A0A6YX06 97 aa9.19□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Inpp5dQ9ES52 1191 aa9.19□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Abcf1Q6P542 837 aaKnown RBP9.19□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Nkx2-3P97334 362 aa9.18□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Dsg2O55111 1122 aa9.17□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Kri1Q8VDQ9 704 aaKnown RBP9.17□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 MarsQ68FL6 902 aaKnown RBP9.17□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Grin2bQ01097 1482 aa9.16□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 AqrQ8CFQ3 1481 aaKnown RBP9.16□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Lmod2Q3UHZ5 550 aa9.16□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Scnn1bQ9WU38 638 aa9.16□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Fmn1Q05860 1466 aa9.16□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Samd9lQ69Z37 1561 aa9.16□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Ncbp3Q8BZR9 615 aaKnown RBP9.16□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Ipo4Q8VI75 1082 aa9.16□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Apba1B2RUJ5 842 aa9.15□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 Pak3Q61036 559 aa9.15□□□□□ -0.94
Ccdc38-203ENSMUST00000132214 AknaQ80VW7 1404 aa9.13□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 GcgrQ61606 485 aa9.12□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Alkbh8Q80Y20 664 aa9.12□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Efcab5A0JP43 1406 aa9.12□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Grin2aP35436 1464 aa9.12□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Rpusd2Q149F1 553 aa9.11□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Abcc1O35379 1528 aa9.11□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Znf703P0CL69 594 aa9.11□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 RydenQ8CAK3 290 aaKnown RBP9.11□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 NptxrQ99J85 493 aa9.11□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Rad54l2Q99NG0 1466 aa9.1□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Anp32bQ9EST5 272 aaKnown RBP9.1□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Pprc1Q6NZN1 1644 aa9.1□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Ythdc2B2RR83 1445 aaKnown RBP9.1□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Psen1P49769 467 aa9.09□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Ube2q2Q8K2Z8 378 aa9.09□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Rapgef2Q8CHG7 1496 aa9.09□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 LtbrP50284 415 aa9.09□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 4930567H17RikQ3V0K5 233 aa9.09□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 CadpsQ80TJ1 1355 aa9.09□□□□□ -0.95
Ccdc38-203ENSMUST00000132214 Magi3Q9EQJ9 1476 aa9.08□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Ythdc1E9Q5K9 736 aaKnown RBP9.08□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Adam19O35674 920 aa9.08□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Irx3P81067 507 aa9.08□□□□□ -0.96
Ccdc38-203ENSMUST00000132214 Gigyf2Q6Y7W8 1291 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms