RNA–Protein interactions for RNA: ENSMUST00000125374.7

Halr1-201, mousemouse

TSL 1 (best) BASIC

Gene Halr1, Length 391 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Halr1-201ENSMUST00000125374 Caskin1Q6P9K8 1431 aa11.52□□□□□ -0.57
Halr1-201ENSMUST00000125374 Gli2Q0VGT2 1544 aa11.5□□□□□ -0.57
Halr1-201ENSMUST00000125374 Nos1Q9Z0J4 1429 aa11.5□□□□□ -0.57
Halr1-201ENSMUST00000125374 GphnQ8BUV3 769 aaKnown RBP11.49□□□□□ -0.57
Halr1-201ENSMUST00000125374 Knl1Q66JQ7 1612 aa11.49□□□□□ -0.57
Halr1-201ENSMUST00000125374 Gm13697A2AK42 830 aa11.48□□□□□ -0.57
Halr1-201ENSMUST00000125374 Iqsec2Q5DU25 1478 aa11.48□□□□□ -0.57
Halr1-201ENSMUST00000125374 RictorQ6QI06 1708 aa11.48□□□□□ -0.57
Halr1-201ENSMUST00000125374 Gli3Q61602 1583 aa11.47□□□□□ -0.57
Halr1-201ENSMUST00000125374 Fhod3Q76LL6 1578 aa11.47□□□□□ -0.57
Halr1-201ENSMUST00000125374 Kif3bQ61771 747 aa11.46□□□□□ -0.57
Halr1-201ENSMUST00000125374 Rapgef3Q8VCC8 918 aa11.46□□□□□ -0.57
Halr1-201ENSMUST00000125374 Naip1Q9QWK5 1403 aa11.45□□□□□ -0.58
Halr1-201ENSMUST00000125374 Rimbp3Q3V0F0 1606 aa11.45□□□□□ -0.58
Halr1-201ENSMUST00000125374 Ccnb3Q810T2 1396 aa11.44□□□□□ -0.58
Halr1-201ENSMUST00000125374 Rrp7aQ9D1C9 280 aaKnown RBP11.44□□□□□ -0.58
Halr1-201ENSMUST00000125374 AlkP97793 1621 aa11.44□□□□□ -0.58
Halr1-201ENSMUST00000125374 Med14A2ABV5 1459 aaKnown RBP11.44□□□□□ -0.58
Halr1-201ENSMUST00000125374 Phlpp1Q8CHE4 1687 aa11.43□□□□□ -0.58
Halr1-201ENSMUST00000125374 Bcl11bQ99PV8 884 aa11.43□□□□□ -0.58
Halr1-201ENSMUST00000125374 Znf518aB2RRF6 1478 aaKnown RBP11.43□□□□□ -0.58
Halr1-201ENSMUST00000125374 Scaf11E9PZM7 1456 aaKnown RBP11.43□□□□□ -0.58
Halr1-201ENSMUST00000125374 Cdk11bP24788 784 aaKnown RBP11.42□□□□□ -0.58
Halr1-201ENSMUST00000125374 Arhgap23Q69ZH9 1483 aa11.41□□□□□ -0.58
Halr1-201ENSMUST00000125374 Naip5Q9R016 1403 aa11.41□□□□□ -0.58
Halr1-201ENSMUST00000125374 Xrn1P97789 1719 aaKnown RBP11.4□□□□□ -0.58
Halr1-201ENSMUST00000125374 Gemin5Q8BX17 1502 aaKnown RBP11.4□□□□□ -0.59
Halr1-201ENSMUST00000125374 Kif7B7ZNG0 1348 aa11.39□□□□□ -0.59
Halr1-201ENSMUST00000125374 Prdm16A2A935 1275 aa11.39□□□□□ -0.59
Halr1-201ENSMUST00000125374 Kdm3bQ6ZPY7 1562 aa11.39□□□□□ -0.59
Halr1-201ENSMUST00000125374 Lmtk2Q3TYD6 1471 aa11.38□□□□□ -0.59
Halr1-201ENSMUST00000125374 DroshaQ5HZJ0 1373 aaKnown RBP11.38□□□□□ -0.59
Halr1-201ENSMUST00000125374 Rims2Q9EQZ7 1530 aa11.37□□□□□ -0.59
Halr1-201ENSMUST00000125374 Zbtb7cQ8VCZ7 619 aa11.36□□□□□ -0.59
Halr1-201ENSMUST00000125374 PzpQ61838 1495 aa11.36□□□□□ -0.59
Halr1-201ENSMUST00000125374 Uggt2E9Q4X2 1504 aa11.35□□□□□ -0.59
Halr1-201ENSMUST00000125374 Abcc6Q9R1S7 1498 aa11.35□□□□□ -0.59
Halr1-201ENSMUST00000125374 Arid4bA2CG63 1314 aaKnown RBP11.35□□□□□ -0.59
Halr1-201ENSMUST00000125374 Fmn2Q9JL04 1578 aa11.33□□□□□ -0.6
Halr1-201ENSMUST00000125374 Topbp1Q6ZQF0 1515 aa11.33□□□□□ -0.6
Halr1-201ENSMUST00000125374 Zc3h13E9Q784 1729 aaKnown RBP11.32□□□□□ -0.6
Halr1-201ENSMUST00000125374 Hfm1D3Z4R1 1434 aa11.31□□□□□ -0.6
Halr1-201ENSMUST00000125374 Spag9Q58A65 1321 aaKnown RBP11.31□□□□□ -0.6
Halr1-201ENSMUST00000125374 Plch2A2AP18 1501 aa11.3□□□□□ -0.6
Halr1-201ENSMUST00000125374 Fbln2P37889 1221 aa11.3□□□□□ -0.6
Halr1-201ENSMUST00000125374 Mast1Q9R1L5 1570 aa11.29□□□□□ -0.6
Halr1-201ENSMUST00000125374 Tubgcp6G5E8P0 1769 aa11.28□□□□□ -0.6
Halr1-201ENSMUST00000125374 Chd2E9PZM4 1827 aaKnown RBP11.28□□□□□ -0.6
Halr1-201ENSMUST00000125374 Mtus2Q3UHD3 1353 aa11.28□□□□□ -0.6
Halr1-201ENSMUST00000125374 Abcc5Q9R1X5 1436 aa11.27□□□□□ -0.6
Halr1-201ENSMUST00000125374 Amigo3Q8C2S7 508 aa11.27□□□□□ -0.61
Halr1-201ENSMUST00000125374 Nrxn3Q6P9K9 1571 aa11.27□□□□□ -0.61
Halr1-201ENSMUST00000125374 Iqgap1Q9JKF1 1657 aaKnown RBP11.27□□□□□ -0.61
Halr1-201ENSMUST00000125374 Abca17E9PX95 1733 aa11.26□□□□□ -0.61
Halr1-201ENSMUST00000125374 Hnrnpul2Q00PI9 745 aaKnown RBP11.26□□□□□ -0.61
Halr1-201ENSMUST00000125374 Usp54Q8BL06 1588 aaKnown RBP11.25□□□□□ -0.61
Halr1-201ENSMUST00000125374 Adgrb2Q8CGM1 1561 aa11.25□□□□□ -0.61
Halr1-201ENSMUST00000125374 Cabp1Q9JLK7 227 aa11.25□□□□□ -0.61
Halr1-201ENSMUST00000125374 Robo2Q7TPD3 1470 aa11.25□□□□□ -0.61
Halr1-201ENSMUST00000125374 Asxl1P59598 1514 aa11.24□□□□□ -0.61
Halr1-201ENSMUST00000125374 Tom1O88746 492 aa11.23□□□□□ -0.61
Halr1-201ENSMUST00000125374 Myo5cE9Q1F5 1742 aa11.21□□□□□ -0.61
Halr1-201ENSMUST00000125374 Prex1Q69ZK0 1650 aa11.21□□□□□ -0.61
Halr1-201ENSMUST00000125374 Plekhh2Q8C115 1491 aa11.21□□□□□ -0.61
Halr1-201ENSMUST00000125374 Vps8Q0P5W1 1427 aa11.21□□□□□ -0.61
Halr1-201ENSMUST00000125374 Ssh2Q5SW75 1423 aa11.21□□□□□ -0.61
Halr1-201ENSMUST00000125374 Txndc2Q6P902 515 aa11.21□□□□□ -0.61
Halr1-201ENSMUST00000125374 Nyap1Q6PFX7 833 aa11.21□□□□□ -0.61
Halr1-201ENSMUST00000125374 Adamts7Q68SA9 1657 aa11.2□□□□□ -0.62
Halr1-201ENSMUST00000125374 Pde4cQ3UEI1 686 aa11.2□□□□□ -0.62
Halr1-201ENSMUST00000125374 Cypt2Q6P924 180 aa11.2□□□□□ -0.62
Halr1-201ENSMUST00000125374 Chic2Q9D9G3 165 aa11.2□□□□□ -0.62
Halr1-201ENSMUST00000125374 Atf5O70191 283 aa11.19□□□□□ -0.62
Halr1-201ENSMUST00000125374 ShprhQ7TPQ3 1674 aa11.19□□□□□ -0.62
Halr1-201ENSMUST00000125374 Adgrb3Q80ZF8 1522 aa11.19□□□□□ -0.62
Halr1-201ENSMUST00000125374 Adgrl2Q8JZZ7 1487 aa11.19□□□□□ -0.62
Halr1-201ENSMUST00000125374 Fhad1A6PWD2 1420 aa11.18□□□□□ -0.62
Halr1-201ENSMUST00000125374 Med1Q925J9 1575 aa11.17□□□□□ -0.62
Halr1-201ENSMUST00000125374 Akap12Q9WTQ5 1684 aa11.17□□□□□ -0.62
Halr1-201ENSMUST00000125374 Brinp3Q499E0 766 aa11.16□□□□□ -0.62
Halr1-201ENSMUST00000125374 DnmbpQ6TXD4 1580 aa11.16□□□□□ -0.62
Halr1-201ENSMUST00000125374 Cdk13Q69ZA1 1511 aaKnown RBP11.15□□□□□ -0.62
Halr1-201ENSMUST00000125374 Il16O54824 1322 aa11.15□□□□□ -0.62
Halr1-201ENSMUST00000125374 Kif1bQ60575 1816 aaKnown RBP11.15□□□□□ -0.62
Halr1-201ENSMUST00000125374 Gimap5Q8BWF2 308 aa11.15□□□□□ -0.62
Halr1-201ENSMUST00000125374 Mbd5B1AYB6 1498 aa11.14□□□□□ -0.63
Halr1-201ENSMUST00000125374 Kif13aQ9EQW7 1749 aa11.14□□□□□ -0.63
Halr1-201ENSMUST00000125374 Kdm5aQ3UXZ9 1690 aa11.14□□□□□ -0.63
Halr1-201ENSMUST00000125374 Ttc21bQ0HA38 1315 aa11.13□□□□□ -0.63
Halr1-201ENSMUST00000125374 IghaA0A0A6YXW6 389 aa11.13□□□□□ -0.63
Halr1-201ENSMUST00000125374 P3h3Q8CG70 732 aa11.13□□□□□ -0.63
Halr1-201ENSMUST00000125374 Slit2Q9R1B9 1521 aa11.13□□□□□ -0.63
Halr1-201ENSMUST00000125374 3425401B19RikD3Z1D3 1412 aa11.12□□□□□ -0.63
Halr1-201ENSMUST00000125374 Gm13695A2AK44 830 aa11.12□□□□□ -0.63
Halr1-201ENSMUST00000125374 Psme1P97371 249 aa11.12□□□□□ -0.63
Halr1-201ENSMUST00000125374 Slc5a4bQ91ZP4 660 aa11.11□□□□□ -0.63
Halr1-201ENSMUST00000125374 Itsn1Q9Z0R4 1714 aa11.11□□□□□ -0.63
Halr1-201ENSMUST00000125374 Skint5A7XUY5 1461 aa11.11□□□□□ -0.63
Halr1-201ENSMUST00000125374 Eif2ak4Q9QZ05 1648 aa11.1□□□□□ -0.63
Halr1-201ENSMUST00000125374 Naip7Q9JIB3 1402 aa11.09□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms