RNA–Protein interactions for RNA: ENSMUST00000113251.9

Trem1-202, Transcript of Triggering receptor expressed on myeloid cells 1, mousemouse

TSL 1 (best) BASIC

Gene Trem1, Length 2,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1-202ENSMUST00000113251 Clstn2Q9ER65 966 aa20.77■□□□□ 0.92
Trem1-202ENSMUST00000113251 Nup155Q99P88 1391 aaKnown RBP20.75■□□□□ 0.91
Trem1-202ENSMUST00000113251 Zmym4A2A791 1549 aaKnown RBP20.74■□□□□ 0.91
Trem1-202ENSMUST00000113251 Gli2Q0VGT2 1544 aa20.74■□□□□ 0.91
Trem1-202ENSMUST00000113251 Topbp1Q6ZQF0 1515 aa20.74■□□□□ 0.91
Trem1-202ENSMUST00000113251 Qser1A2BIE1 1698 aa20.73■□□□□ 0.91
Trem1-202ENSMUST00000113251 Zfp644E9QA22 1323 aa20.72■□□□□ 0.91
Trem1-202ENSMUST00000113251 Uggt2E9Q4X2 1504 aa20.72■□□□□ 0.91
Trem1-202ENSMUST00000113251 Mphosph9A6H5Y1 991 aa20.69■□□□□ 0.9
Trem1-202ENSMUST00000113251 Yeats2Q3TUF7 1407 aa20.69■□□□□ 0.9
Trem1-202ENSMUST00000113251 Map4P27546 1125 aaKnown RBP20.68■□□□□ 0.9
Trem1-202ENSMUST00000113251 Pcdh10E9PXQ7 1057 aa20.68■□□□□ 0.9
Trem1-202ENSMUST00000113251 Asxl1P59598 1514 aa20.66■□□□□ 0.9
Trem1-202ENSMUST00000113251 Robo2Q7TPD3 1470 aa20.65■□□□□ 0.9
Trem1-202ENSMUST00000113251 Naip6Q9JIB6 1403 aa20.65■□□□□ 0.9
Trem1-202ENSMUST00000113251 Kif3bQ61771 747 aa20.64■□□□□ 0.89
Trem1-202ENSMUST00000113251 Ttll5Q8CHB8 1328 aa20.64■□□□□ 0.89
Trem1-202ENSMUST00000113251 PtprgQ05909 1442 aa20.63■□□□□ 0.89
Trem1-202ENSMUST00000113251 NpatQ8BMA5 1420 aa20.62■□□□□ 0.89
Trem1-202ENSMUST00000113251 Prex1Q69ZK0 1650 aa20.61■□□□□ 0.89
Trem1-202ENSMUST00000113251 Eid3Q3V124 375 aa20.6■□□□□ 0.89
Trem1-202ENSMUST00000113251 Abca6Q8K441 1624 aa20.6■□□□□ 0.89
Trem1-202ENSMUST00000113251 Pde4cQ3UEI1 686 aa20.59■□□□□ 0.89
Trem1-202ENSMUST00000113251 Zbtb7cQ8VCZ7 619 aa20.58■□□□□ 0.89
Trem1-202ENSMUST00000113251 Nsd2Q8BVE8 1365 aa20.57■□□□□ 0.88
Trem1-202ENSMUST00000113251 Cd109Q8R422 1442 aa20.57■□□□□ 0.88
Trem1-202ENSMUST00000113251 Camsap2Q8C1B1 1461 aa20.57■□□□□ 0.88
Trem1-202ENSMUST00000113251 Trak1Q6PD31 939 aa20.56■□□□□ 0.88
Trem1-202ENSMUST00000113251 Hnrnpul2Q00PI9 745 aaKnown RBP20.55■□□□□ 0.88
Trem1-202ENSMUST00000113251 Adamtsl3G3UXC7 1706 aa20.55■□□□□ 0.88
Trem1-202ENSMUST00000113251 Pkd2O35245 966 aa20.54■□□□□ 0.88
Trem1-202ENSMUST00000113251 Ylpm1Q9R0I7 1386 aaKnown RBP20.54■□□□□ 0.88
Trem1-202ENSMUST00000113251 Myom3A2ABU4 1439 aa20.54■□□□□ 0.88
Trem1-202ENSMUST00000113251 Tmem131lQ3U3D7 1597 aa20.54■□□□□ 0.88
Trem1-202ENSMUST00000113251 Prdm2A2A7B5 1709 aaKnown RBP20.53■□□□□ 0.88
Trem1-202ENSMUST00000113251 Adamts7Q68SA9 1657 aa20.52■□□□□ 0.88
Trem1-202ENSMUST00000113251 DroshaQ5HZJ0 1373 aaKnown RBP20.51■□□□□ 0.87
Trem1-202ENSMUST00000113251 TonslQ6NZL6 1363 aa20.51■□□□□ 0.87
Trem1-202ENSMUST00000113251 Rsph4aQ8BYM7 716 aa20.51■□□□□ 0.87
Trem1-202ENSMUST00000113251 Akap12Q9WTQ5 1684 aa20.5■□□□□ 0.87
Trem1-202ENSMUST00000113251 Pik3c2gO70167 1506 aa20.5■□□□□ 0.87
Trem1-202ENSMUST00000113251 Rprd2Q6NXI6 1469 aaKnown RBP20.49■□□□□ 0.87
Trem1-202ENSMUST00000113251 Naip5Q9R016 1403 aa20.49■□□□□ 0.87
Trem1-202ENSMUST00000113251 AnkarA2RT91 1465 aa20.49■□□□□ 0.87
Trem1-202ENSMUST00000113251 RictorQ6QI06 1708 aa20.48■□□□□ 0.87
Trem1-202ENSMUST00000113251 CltcQ68FD5 1675 aaKnown RBP20.48■□□□□ 0.87
Trem1-202ENSMUST00000113251 Hdac5Q9Z2V6 1113 aa20.47■□□□□ 0.87
Trem1-202ENSMUST00000113251 Atp7aQ64430 1491 aa20.46■□□□□ 0.87
Trem1-202ENSMUST00000113251 Talpid3E9PV87 1520 aa20.46■□□□□ 0.87
Trem1-202ENSMUST00000113251 Iqgap3F8VQ29 1632 aa20.45■□□□□ 0.86
Trem1-202ENSMUST00000113251 Dhx9O70133 1380 aaKnown RBP20.44■□□□□ 0.86
Trem1-202ENSMUST00000113251 Las1lA2BE28 776 aaKnown RBP20.44■□□□□ 0.86
Trem1-202ENSMUST00000113251 Dnajc5gQ8C632 165 aa20.44■□□□□ 0.86
Trem1-202ENSMUST00000113251 Dot1lQ6XZL8 1540 aa20.44■□□□□ 0.86
Trem1-202ENSMUST00000113251 Usp47Q8BY87 1376 aa20.43■□□□□ 0.86
Trem1-202ENSMUST00000113251 Neurod1Q60867 357 aa20.43■□□□□ 0.86
Trem1-202ENSMUST00000113251 Hspa5P20029 655 aaKnown RBP20.42■□□□□ 0.86
Trem1-202ENSMUST00000113251 Tarbp1E9Q368 1579 aa20.42■□□□□ 0.86
Trem1-202ENSMUST00000113251 Ppip5k1A2ARP1 1436 aa20.41■□□□□ 0.86
Trem1-202ENSMUST00000113251 Alpk3Q924C5 1678 aa20.4■□□□□ 0.86
Trem1-202ENSMUST00000113251 Ttc21bQ0HA38 1315 aa20.4■□□□□ 0.86
Trem1-202ENSMUST00000113251 Ino80Q6ZPV2 1559 aa20.39■□□□□ 0.86
Trem1-202ENSMUST00000113251 Plppr3Q7TPB0 716 aa20.39■□□□□ 0.85
Trem1-202ENSMUST00000113251 Knl1Q66JQ7 1612 aa20.38■□□□□ 0.85
Trem1-202ENSMUST00000113251 Myom2Q14BI5 1463 aa20.37■□□□□ 0.85
Trem1-202ENSMUST00000113251 Ehbp1l1Q99MS7 1716 aa20.36■□□□□ 0.85
Trem1-202ENSMUST00000113251 Rock1P70335 1354 aa20.36■□□□□ 0.85
Trem1-202ENSMUST00000113251 Edc4Q3UJB9 1406 aaKnown RBP20.36■□□□□ 0.85
Trem1-202ENSMUST00000113251 Afap1Q80YS6 731 aa20.36■□□□□ 0.85
Trem1-202ENSMUST00000113251 Abca8aQ8K442 1620 aa20.35■□□□□ 0.85
Trem1-202ENSMUST00000113251 Arhgap23Q69ZH9 1483 aa20.33■□□□□ 0.84
Trem1-202ENSMUST00000113251 Tecpr2Q3UH45 1423 aa20.33■□□□□ 0.84
Trem1-202ENSMUST00000113251 Hfm1D3Z4R1 1434 aa20.32■□□□□ 0.84
Trem1-202ENSMUST00000113251 Uggt1Q6P5E4 1551 aa20.31■□□□□ 0.84
Trem1-202ENSMUST00000113251 Efcab6Q6P1E8 1516 aa20.31■□□□□ 0.84
Trem1-202ENSMUST00000113251 Sall2Q9QX96 1004 aa20.28■□□□□ 0.84
Trem1-202ENSMUST00000113251 Adgrb3Q80ZF8 1522 aa20.28■□□□□ 0.84
Trem1-202ENSMUST00000113251 Safb2Q80YR5 991 aaKnown RBP20.28■□□□□ 0.84
Trem1-202ENSMUST00000113251 Iqgap1Q9JKF1 1657 aaKnown RBP20.27■□□□□ 0.84
Trem1-202ENSMUST00000113251 ErbinQ80TH2 1402 aa20.27■□□□□ 0.84
Trem1-202ENSMUST00000113251 Anks4bQ8K3X6 423 aa20.26■□□□□ 0.83
Trem1-202ENSMUST00000113251 Erich6D3Z6S9 713 aa20.25■□□□□ 0.83
Trem1-202ENSMUST00000113251 Ahdc1Q6PAL7 1594 aaKnown RBP20.25■□□□□ 0.83
Trem1-202ENSMUST00000113251 Kdm5aQ3UXZ9 1690 aa20.24■□□□□ 0.83
Trem1-202ENSMUST00000113251 Med14A2ABV5 1459 aaKnown RBP20.24■□□□□ 0.83
Trem1-202ENSMUST00000113251 Skint5A7XUY5 1461 aa20.23■□□□□ 0.83
Trem1-202ENSMUST00000113251 Abcc6Q9R1S7 1498 aa20.23■□□□□ 0.83
Trem1-202ENSMUST00000113251 Kif13aQ9EQW7 1749 aa20.22■□□□□ 0.83
Trem1-202ENSMUST00000113251 Rgl3Q3UYI5 709 aa20.22■□□□□ 0.83
Trem1-202ENSMUST00000113251 Dip2bQ3UH60 1574 aa20.21■□□□□ 0.83
Trem1-202ENSMUST00000113251 Washc2Q6PGL7 1334 aa20.21■□□□□ 0.83
Trem1-202ENSMUST00000113251 Cep152A2AUM9 1736 aaKnown RBP20.18■□□□□ 0.82
Trem1-202ENSMUST00000113251 Tulp4Q9JIL5 1547 aa20.17■□□□□ 0.82
Trem1-202ENSMUST00000113251 Mbd5B1AYB6 1498 aa20.17■□□□□ 0.82
Trem1-202ENSMUST00000113251 Gm13697A2AK42 830 aa20.17■□□□□ 0.82
Trem1-202ENSMUST00000113251 Mroh1E0CZ22 1640 aa20.17■□□□□ 0.82
Trem1-202ENSMUST00000113251 Itsn1Q9Z0R4 1714 aa20.16■□□□□ 0.82
Trem1-202ENSMUST00000113251 Mroh3A0A1D5RM54 893 aa20.16■□□□□ 0.82
Trem1-202ENSMUST00000113251 Plxnc1Q9QZC2 1574 aa20.16■□□□□ 0.82
Trem1-202ENSMUST00000113251 Chd2E9PZM4 1827 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms