RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Drc7Q6V3W6 876 aa22,49■■□□□ 1,19
Trim71-201ENSMUST00000111816 Spag9Q58A65 1321 aaKnown RBP22,49■■□□□ 1,19
Trim71-201ENSMUST00000111816 Mfap1aC0HKD8 439 aaKnown RBP22,49■■□□□ 1,19
Trim71-201ENSMUST00000111816 Mfap1bC0HKD9 439 aaKnown RBP22,49■■□□□ 1,19
Trim71-201ENSMUST00000111816 Srek1Q8BZX4 494 aaKnown RBP22,48■■□□□ 1,19
Trim71-201ENSMUST00000111816 Setd5Q5XJV7 1441 aa22,48■■□□□ 1,19
Trim71-201ENSMUST00000111816 Mia2Q91ZV0 1396 aa22,47■■□□□ 1,19
Trim71-201ENSMUST00000111816 Krt82Q99M74 516 aa22,47■■□□□ 1,19
Trim71-201ENSMUST00000111816 Evc2Q8K1G2 1220 aa22,47■■□□□ 1,19
Trim71-201ENSMUST00000111816 Nap1l3Q794H2 544 aa22,47■■□□□ 1,19
Trim71-201ENSMUST00000111816 Plcd4Q8K3R3 807 aa22,47■■□□□ 1,19
Trim71-201ENSMUST00000111816 Map3k7clP58500 142 aa22,46■■□□□ 1,19
Trim71-201ENSMUST00000111816 OptnQ8K3K8 584 aa22,46■■□□□ 1,19
Trim71-201ENSMUST00000111816 NaspQ99MD9 773 aaKnown RBP22,46■■□□□ 1,19
Trim71-201ENSMUST00000111816 Utp3Q9JI13 469 aaKnown RBP22,46■■□□□ 1,19
Trim71-201ENSMUST00000111816 NgefQ8CHT1 710 aa22,44■■□□□ 1,18
Trim71-201ENSMUST00000111816 Gtf2a1Q99PM3 378 aa22,43■■□□□ 1,18
Trim71-201ENSMUST00000111816 AcrbpQ3V140 540 aa22,43■■□□□ 1,18
Trim71-201ENSMUST00000111816 Ccdc43Q9CR29 222 aaKnown RBP22,42■■□□□ 1,18
Trim71-201ENSMUST00000111816 Gripap1Q8VD04 806 aa22,42■■□□□ 1,18
Trim71-201ENSMUST00000111816 Rb1cc1Q9ESK9 1588 aa22,42■■□□□ 1,18
Trim71-201ENSMUST00000111816 Mtus2Q3UHD3 1353 aa22,42■■□□□ 1,18
Trim71-201ENSMUST00000111816 Brpf1B2RRD7 1212 aa22,41■■□□□ 1,18
Trim71-201ENSMUST00000111816 GorabQ8BRM2 368 aa22,41■■□□□ 1,18
Trim71-201ENSMUST00000111816 Tmf1B9EKI3 1091 aa22,4■■□□□ 1,18
Trim71-201ENSMUST00000111816 Aebp2Q9Z248 504 aaKnown RBP22,39■■□□□ 1,18
Trim71-201ENSMUST00000111816 U2surpQ6NV83 1029 aaKnown RBP22,39■■□□□ 1,18
Trim71-201ENSMUST00000111816 Dixdc1Q80Y83 711 aa22,38■■□□□ 1,17
Trim71-201ENSMUST00000111816 Necab1Q8BG18 352 aa22,38■■□□□ 1,17
Trim71-201ENSMUST00000111816 Tmx4Q8C0L0 335 aa22,38■■□□□ 1,17
Trim71-201ENSMUST00000111816 Kif4P33174 1231 aa22,37■■□□□ 1,17
Trim71-201ENSMUST00000111816 Cdkn1cP49919 348 aa22,37■■□□□ 1,17
Trim71-201ENSMUST00000111816 Cgnl1Q6AW69 1298 aa22,37■■□□□ 1,17
Trim71-201ENSMUST00000111816 Plagl1Q9JLQ4 704 aa22,36■■□□□ 1,17
Trim71-201ENSMUST00000111816 Tmco5bQ80X59 307 aa22,35■■□□□ 1,17
Trim71-201ENSMUST00000111816 Ddx11Q6AXC6 880 aa22,35■■□□□ 1,17
Trim71-201ENSMUST00000111816 Ccar1Q8CH18 1146 aaKnown RBP22,35■■□□□ 1,17
Trim71-201ENSMUST00000111816 Q3TQI7 289 aaKnown RBP22,34■■□□□ 1,17
Trim71-201ENSMUST00000111816 Cplx2P84086 134 aa22,34■■□□□ 1,17
Trim71-201ENSMUST00000111816 Eea1Q8BL66 1411 aa22,33■■□□□ 1,16
Trim71-201ENSMUST00000111816 Kif7B7ZNG0 1348 aa22,32■■□□□ 1,16
Trim71-201ENSMUST00000111816 Dhx8A2A4P0 1244 aaKnown RBP22,32■■□□□ 1,16
Trim71-201ENSMUST00000111816 Cep112Q5PR68 954 aa22,31■■□□□ 1,16
Trim71-201ENSMUST00000111816 Arglu1Q3UL36 271 aaKnown RBP22,31■■□□□ 1,16
Trim71-201ENSMUST00000111816 Stard8Q8K031 1019 aa22,3■■□□□ 1,16
Trim71-201ENSMUST00000111816 Chmp3Q9CQ10 224 aa22,3■■□□□ 1,16
Trim71-201ENSMUST00000111816 Ccdc83Q9D4V3 305 aa22,3■■□□□ 1,16
Trim71-201ENSMUST00000111816 Casq1O09165 405 aa22,29■■□□□ 1,16
Trim71-201ENSMUST00000111816 Speer4f1Q9D5Q6 258 aa22,28■■□□□ 1,16
Trim71-201ENSMUST00000111816 Chmp4cQ9D7F7 232 aa22,27■■□□□ 1,16
Trim71-201ENSMUST00000111816 Erlin2Q8BFZ9 340 aa22,27■■□□□ 1,16
Trim71-201ENSMUST00000111816 Pmfbp1Q9WVQ0 1022 aa22,27■■□□□ 1,16
Trim71-201ENSMUST00000111816 Gbp4Q61107 620 aa22,27■■□□□ 1,16
Trim71-201ENSMUST00000111816 Nap1l1P28656 391 aaKnown RBP22,26■■□□□ 1,15
Trim71-201ENSMUST00000111816 Phf14Q9D4H9 881 aa22,26■■□□□ 1,15
Trim71-201ENSMUST00000111816 Spata24Q6P926 205 aa22,26■■□□□ 1,15
Trim71-201ENSMUST00000111816 Gpatch3Q8BIY1 525 aa22,26■■□□□ 1,15
Trim71-201ENSMUST00000111816 Zscan21Q07231 555 aa22,25■■□□□ 1,15
Trim71-201ENSMUST00000111816 Rec8Q8C5S7 591 aa22,25■■□□□ 1,15
Trim71-201ENSMUST00000111816 Wdr78E9PYY5 807 aa22,25■■□□□ 1,15
Trim71-201ENSMUST00000111816 HdgfP51859 237 aaKnown RBP22,24■■□□□ 1,15
Trim71-201ENSMUST00000111816 Golga2Q921M4 999 aa22,24■■□□□ 1,15
Trim71-201ENSMUST00000111816 Sparcl1P70663 650 aa22,24■■□□□ 1,15
Trim71-201ENSMUST00000111816 Ncbp3Q8BZR9 615 aaKnown RBP22,24■■□□□ 1,15
Trim71-201ENSMUST00000111816 ChgaP26339 463 aaKnown RBP22,23■■□□□ 1,15
Trim71-201ENSMUST00000111816 Cplx1P63040 134 aa22,23■■□□□ 1,15
Trim71-201ENSMUST00000111816 ItpripQ3TNL8 555 aa22,22■■□□□ 1,15
Trim71-201ENSMUST00000111816 Dydc1Q9D9T0 175 aa22,22■■□□□ 1,15
Trim71-201ENSMUST00000111816 Paip2Q9D6V8 124 aa22,21■■□□□ 1,15
Trim71-201ENSMUST00000111816 Sept6Q9R1T4 434 aa22,21■■□□□ 1,15
Trim71-201ENSMUST00000111816 Rsph6aQ8CDR2 708 aa22,21■■□□□ 1,15
Trim71-201ENSMUST00000111816 CntlnA2AM05 1397 aa22,21■■□□□ 1,15
Trim71-201ENSMUST00000111816 KinQ8K339 391 aa22,19■■□□□ 1,14
Trim71-201ENSMUST00000111816 Cluap1Q8R3P7 413 aa22,18■■□□□ 1,14
Trim71-201ENSMUST00000111816 March6Q6ZQ89 909 aa22,18■■□□□ 1,14
Trim71-201ENSMUST00000111816 Bicd2Q921C5 820 aa22,17■■□□□ 1,14
Trim71-201ENSMUST00000111816 Smc2Q8CG48 1191 aaKnown RBP22,17■■□□□ 1,14
Trim71-201ENSMUST00000111816 Rabep1O35551 862 aa22,17■■□□□ 1,14
Trim71-201ENSMUST00000111816 A0A0U1RNP2 1173 aa22,17■■□□□ 1,14
Trim71-201ENSMUST00000111816 Rnf20Q5DTM8 973 aa22,16■■□□□ 1,14
Trim71-201ENSMUST00000111816 U2af1Q9D883 239 aaKnown RBP22,15■■□□□ 1,14
Trim71-201ENSMUST00000111816 Kiaa0753Q6A000 959 aa22,15■■□□□ 1,14
Trim71-201ENSMUST00000111816 Ppp4r3bQ922R5 820 aa22,14■■□□□ 1,13
Trim71-201ENSMUST00000111816 Tnnt1O88346 262 aa22,14■■□□□ 1,13
Trim71-201ENSMUST00000111816 Ubxn4Q8VCH8 506 aa22,14■■□□□ 1,13
Trim71-201ENSMUST00000111816 Cnga1P29974 684 aa22,13■■□□□ 1,13
Trim71-201ENSMUST00000111816 Luc7lQ9CYI4 371 aaKnown RBP22,13■■□□□ 1,13
Trim71-201ENSMUST00000111816 Trap1aP19473 224 aa22,13■■□□□ 1,13
Trim71-201ENSMUST00000111816 Stk24Q99KH8 431 aa22,12■■□□□ 1,13
Trim71-201ENSMUST00000111816 Ccdc18Q640L5 1455 aa22,12■■□□□ 1,13
Trim71-201ENSMUST00000111816 Samd1D3YXK1 519 aa22,11■■□□□ 1,13
Trim71-201ENSMUST00000111816 Polr3gQ6NXY9 223 aa22,1■■□□□ 1,13
Trim71-201ENSMUST00000111816 PhaxQ9JJT9 385 aaKnown RBP22,1■■□□□ 1,13
Trim71-201ENSMUST00000111816 PdiltQ9DAN1 588 aa22,09■■□□□ 1,13
Trim71-201ENSMUST00000111816 Lrrcc1Q69ZB0 1026 aa22,09■■□□□ 1,13
Trim71-201ENSMUST00000111816 Tmco3Q8BH01 678 aa22,08■■□□□ 1,13
Trim71-201ENSMUST00000111816 Ccar2Q8VDP4 922 aaKnown RBP22,08■■□□□ 1,13
Trim71-201ENSMUST00000111816 Map9Q3TRR0 646 aa22,08■■□□□ 1,13
Trim71-201ENSMUST00000111816 Ubl4bQ9CQ84 188 aa22,08■■□□□ 1,12
Trim71-201ENSMUST00000111816 Spag5Q7TME2 1165 aa22,07■■□□□ 1,12
Retrieved 100 of 22,080 RNA–protein pairs in 10,9 ms