RNA–Protein interactions for RNA: ENSMUST00000111564.7

Clip1-204, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clip1, Length 5,609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-204ENSMUST00000111564 Abca16E9PWJ7 1678 aa13.73□□□□□ -0.21
Clip1-204ENSMUST00000111564 Shroom2A2ALU4 1481 aa13.73□□□□□ -0.21
Clip1-204ENSMUST00000111564 Ncoa2Q61026 1462 aa13.72□□□□□ -0.21
Clip1-204ENSMUST00000111564 Pabpn1Q8CCS6 302 aaKnown RBP13.72□□□□□ -0.21
Clip1-204ENSMUST00000111564 Ncapd3Q6ZQK0 1506 aa13.72□□□□□ -0.21
Clip1-204ENSMUST00000111564 Dhx57Q6P5D3 1388 aaKnown RBP13.71□□□□□ -0.21
Clip1-204ENSMUST00000111564 Gm1043A0A140LJC2 1431 aa13.71□□□□□ -0.21
Clip1-204ENSMUST00000111564 Ubap1lG3UW59 384 aa13.71□□□□□ -0.21
Clip1-204ENSMUST00000111564 Spag9Q58A65 1321 aaKnown RBP13.7□□□□□ -0.22
Clip1-204ENSMUST00000111564 Gm14025A2AP89 1413 aa13.7□□□□□ -0.22
Clip1-204ENSMUST00000111564 Ifit1bl1D3Z6F0 470 aa13.7□□□□□ -0.22
Clip1-204ENSMUST00000111564 Pak3Q61036 559 aa13.7□□□□□ -0.22
Clip1-204ENSMUST00000111564 Znf316Q6PGE4 1016 aa13.7□□□□□ -0.22
Clip1-204ENSMUST00000111564 Ccdc141E9Q8Q6 1531 aa13.69□□□□□ -0.22
Clip1-204ENSMUST00000111564 Ciz1Q8VEH2 845 aa13.69□□□□□ -0.22
Clip1-204ENSMUST00000111564 Ppm1gQ61074 542 aa13.69□□□□□ -0.22
Clip1-204ENSMUST00000111564 Setd1bQ8CFT2 1985 aa13.68□□□□□ -0.22
Clip1-204ENSMUST00000111564 Chmp3Q9CQ10 224 aa13.67□□□□□ -0.22
Clip1-204ENSMUST00000111564 Ap3b2Q9JME5 1082 aa13.67□□□□□ -0.22
Clip1-204ENSMUST00000111564 Dbr1Q923B1 550 aa13.67□□□□□ -0.22
Clip1-204ENSMUST00000111564 NexmifQ5DTT1 1515 aa13.67□□□□□ -0.22
Clip1-204ENSMUST00000111564 Mug1P28665 1476 aa13.67□□□□□ -0.22
Clip1-204ENSMUST00000111564 U2af1Q9D883 239 aaKnown RBP13.67□□□□□ -0.22
Clip1-204ENSMUST00000111564 Abcc2Q8VI47 1543 aa13.66□□□□□ -0.22
Clip1-204ENSMUST00000111564 Kif3bQ61771 747 aa13.66□□□□□ -0.22
Clip1-204ENSMUST00000111564 MecomP14404 1042 aa13.65□□□□□ -0.22
Clip1-204ENSMUST00000111564 Iffo2Q8R2V2 512 aa13.65□□□□□ -0.22
Clip1-204ENSMUST00000111564 Ccdc9Q8VC31 543 aaKnown RBP13.65□□□□□ -0.22
Clip1-204ENSMUST00000111564 Peg3Q3URU2 1571 aa13.65□□□□□ -0.22
Clip1-204ENSMUST00000111564 Cabp1Q9JLK7 227 aa13.65□□□□□ -0.22
Clip1-204ENSMUST00000111564 Rwdd1Q9CQK7 243 aa13.65□□□□□ -0.22
Clip1-204ENSMUST00000111564 BC005561E9Q5E2 1589 aa13.64□□□□□ -0.23
Clip1-204ENSMUST00000111564 Gm973E9Q295 1059 aa13.64□□□□□ -0.23
Clip1-204ENSMUST00000111564 Tmf1B9EKI3 1091 aa13.64□□□□□ -0.23
Clip1-204ENSMUST00000111564 Ecm2Q5FW85 670 aa13.64□□□□□ -0.23
Clip1-204ENSMUST00000111564 Adam1bQ8R534 806 aa13.64□□□□□ -0.23
Clip1-204ENSMUST00000111564 Rapgef6Q5NCJ1 1609 aa13.64□□□□□ -0.23
Clip1-204ENSMUST00000111564 Pkd2O35245 966 aa13.63□□□□□ -0.23
Clip1-204ENSMUST00000111564 Rundc1Q0VDN7 615 aa13.63□□□□□ -0.23
Clip1-204ENSMUST00000111564 Tmco5bQ80X59 307 aa13.63□□□□□ -0.23
Clip1-204ENSMUST00000111564 Ncoa3O09000 1398 aa13.63□□□□□ -0.23
Clip1-204ENSMUST00000111564 Tpm3-rs7D3Z2H9 248 aa13.63□□□□□ -0.23
Clip1-204ENSMUST00000111564 Bcl11bQ99PV8 884 aa13.62□□□□□ -0.23
Clip1-204ENSMUST00000111564 Magi1Q6RHR9 1471 aa13.62□□□□□ -0.23
Clip1-204ENSMUST00000111564 Speer4f1Q9D5Q6 258 aa13.61□□□□□ -0.23
Clip1-204ENSMUST00000111564 Mbd3Q9Z2D8 285 aaKnown RBP13.61□□□□□ -0.23
Clip1-204ENSMUST00000111564 Isy1Q69ZQ2 285 aaKnown RBP13.61□□□□□ -0.23
Clip1-204ENSMUST00000111564 Plekhh2Q8C115 1491 aa13.61□□□□□ -0.23
Clip1-204ENSMUST00000111564 Trak1Q6PD31 939 aa13.6□□□□□ -0.23
Clip1-204ENSMUST00000111564 Fam163aQ8CAA5 168 aa13.6□□□□□ -0.23
Clip1-204ENSMUST00000111564 Map3k4O08648 1597 aa13.59□□□□□ -0.23
Clip1-204ENSMUST00000111564 3425401B19RikD3Z1D3 1412 aa13.59□□□□□ -0.23
Clip1-204ENSMUST00000111564 Tdrd9Q14BI7 1383 aa13.59□□□□□ -0.23
Clip1-204ENSMUST00000111564 Abcc1O35379 1528 aa13.59□□□□□ -0.23
Clip1-204ENSMUST00000111564 Dcaf11Q91VU6 549 aa13.58□□□□□ -0.24
Clip1-204ENSMUST00000111564 Arhgef12Q8R4H2 1543 aaKnown RBP13.58□□□□□ -0.24
Clip1-204ENSMUST00000111564 B4galnt3Q6L8S8 986 aa13.57□□□□□ -0.24
Clip1-204ENSMUST00000111564 Vps53Q8CCB4 832 aa13.57□□□□□ -0.24
Clip1-204ENSMUST00000111564 Utp14aQ640M1 767 aaKnown RBP13.57□□□□□ -0.24
Clip1-204ENSMUST00000111564 Chrna2Q91X60 512 aa13.57□□□□□ -0.24
Clip1-204ENSMUST00000111564 PtmsQ9D0J8 101 aaKnown RBP13.57□□□□□ -0.24
Clip1-204ENSMUST00000111564 UacaQ8CGB3 1411 aa13.56□□□□□ -0.24
Clip1-204ENSMUST00000111564 A2mQ6GQT1 1474 aa13.55□□□□□ -0.24
Clip1-204ENSMUST00000111564 Tomm22Q9CPQ3 142 aa13.55□□□□□ -0.24
Clip1-204ENSMUST00000111564 Dnmt1P13864 1620 aaKnown RBP13.55□□□□□ -0.24
Clip1-204ENSMUST00000111564 Noc3lQ8VI84 807 aaKnown RBP13.55□□□□□ -0.24
Clip1-204ENSMUST00000111564 CenpjQ569L8 1344 aa13.54□□□□□ -0.24
Clip1-204ENSMUST00000111564 Hspa5P20029 655 aaKnown RBP13.54□□□□□ -0.24
Clip1-204ENSMUST00000111564 Pcmtd1P59913 357 aa13.54□□□□□ -0.24
Clip1-204ENSMUST00000111564 R3hcc1Q8BSI6 488 aa13.54□□□□□ -0.24
Clip1-204ENSMUST00000111564 Golga2Q921M4 999 aa13.54□□□□□ -0.24
Clip1-204ENSMUST00000111564 Brpf1B2RRD7 1212 aa13.53□□□□□ -0.24
Clip1-204ENSMUST00000111564 Cabp4Q8VHC5 271 aa13.53□□□□□ -0.24
Clip1-204ENSMUST00000111564 Pibf1E9Q6K3 756 aa13.53□□□□□ -0.24
Clip1-204ENSMUST00000111564 Ythdc2B2RR83 1445 aaKnown RBP13.52□□□□□ -0.24
Clip1-204ENSMUST00000111564 CgnP59242 1191 aa13.52□□□□□ -0.24
Clip1-204ENSMUST00000111564 Prex2Q3LAC4 1598 aa13.52□□□□□ -0.25
Clip1-204ENSMUST00000111564 Lmtk2Q3TYD6 1471 aa13.52□□□□□ -0.25
Clip1-204ENSMUST00000111564 Naip2Q9QUK4 1447 aa13.51□□□□□ -0.25
Clip1-204ENSMUST00000111564 Srcin1Q9QWI6 1250 aa13.51□□□□□ -0.25
Clip1-204ENSMUST00000111564 Rock2P70336 1388 aa13.51□□□□□ -0.25
Clip1-204ENSMUST00000111564 Fancd2Q80V62 1450 aa13.51□□□□□ -0.25
Clip1-204ENSMUST00000111564 Arhgef11Q68FM7 1552 aa13.51□□□□□ -0.25
Clip1-204ENSMUST00000111564 Vps8Q0P5W1 1427 aa13.5□□□□□ -0.25
Clip1-204ENSMUST00000111564 Stard8Q8K031 1019 aa13.5□□□□□ -0.25
Clip1-204ENSMUST00000111564 Nup155Q99P88 1391 aaKnown RBP13.5□□□□□ -0.25
Clip1-204ENSMUST00000111564 Znf330Q922H9 316 aa13.49□□□□□ -0.25
Clip1-204ENSMUST00000111564 Sart1Q9Z315 806 aaKnown RBP13.49□□□□□ -0.25
Clip1-204ENSMUST00000111564 Smc4Q8CG47 1286 aa13.49□□□□□ -0.25
Clip1-204ENSMUST00000111564 Ccdc47Q9D024 483 aaKnown RBP13.49□□□□□ -0.25
Clip1-204ENSMUST00000111564 Aebp2Q9Z248 504 aaKnown RBP13.49□□□□□ -0.25
Clip1-204ENSMUST00000111564 Arhgap5P97393 1501 aa13.49□□□□□ -0.25
Clip1-204ENSMUST00000111564 Stk31Q99MW1 1018 aa13.48□□□□□ -0.25
Clip1-204ENSMUST00000111564 Senp3Q9EP97 568 aaKnown RBP13.48□□□□□ -0.25
Clip1-204ENSMUST00000111564 Abcc5Q9R1X5 1436 aa13.48□□□□□ -0.25
Clip1-204ENSMUST00000111564 Rrbp1Q99PL5 1605 aaKnown RBP13.48□□□□□ -0.25
Clip1-204ENSMUST00000111564 Spryd3E9Q9B3 442 aa13.47□□□□□ -0.25
Clip1-204ENSMUST00000111564 Ddx11Q6AXC6 880 aa13.47□□□□□ -0.25
Clip1-204ENSMUST00000111564 Gapvd1Q6PAR5 1458 aa13.47□□□□□ -0.25
Clip1-204ENSMUST00000111564 Fan1Q69ZT1 1020 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms