RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Smarce1O54941 411 aaKnown RBP9.95□□□□□ -0.82
Scn8a-204ENSMUST00000108909 NgefQ8CHT1 710 aa9.95□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Cacna1dQ99246 2179 aa9.94□□□□□ -0.82
Scn8a-204ENSMUST00000108909 St18Q80TY4 1045 aa9.94□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Setd1bQ8CFT2 1985 aa9.94□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Polr3gQ6NXY9 223 aa9.94□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Tpd52l1O54818 204 aa9.94□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Casq1O09165 405 aa9.94□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Map4P27546 1125 aaKnown RBP9.93□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Ttll13A4Q9F6 804 aa9.93□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Filip1lQ6P6L0 1131 aa9.93□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Fam43aQ8BUP8 424 aa9.93□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Rock1P70335 1354 aa9.93□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Rabep1O35551 862 aa9.93□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Gripap1Q8VD04 806 aa9.93□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Gtf2e1Q9D0D5 440 aa9.93□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Tnnt1O88346 262 aa9.92□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Prkrip1Q9CWV6 186 aaKnown RBP9.92□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Rnf214Q8BFU3 668 aaKnown RBP9.92□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Dcaf11Q91VU6 549 aa9.92□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Brpf1B2RRD7 1212 aa9.92□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Ice1E9Q286 2241 aaKnown RBP9.92□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Anp32eP97822 260 aaKnown RBP9.92□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Drc7Q6V3W6 876 aa9.92□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Znf771Q8BJ90 317 aa9.92□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Glipr1l2Q9CQ35 332 aa9.92□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Usp47Q8BY87 1376 aa9.91□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Tpm3P21107 285 aaKnown RBP9.91□□□□□ -0.82
Scn8a-204ENSMUST00000108909 MecomP14404 1042 aa9.91□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Ftsj3Q9DBE9 838 aaKnown RBP9.91□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Pibf1E9Q6K3 756 aa9.91□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Ralbp1Q62172 648 aa9.91□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Arhgap27A2AB59 869 aa9.91□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Safb2Q80YR5 991 aaKnown RBP9.9□□□□□ -0.82
Scn8a-204ENSMUST00000108909 KarsQ99MN1 595 aaKnown RBP9.9□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Cabp1Q9JLK7 227 aa9.9□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Phf14Q9D4H9 881 aa9.9□□□□□ -0.82
Scn8a-204ENSMUST00000108909 Rtf1A2AQ19 715 aaKnown RBP9.89□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Kif4P33174 1231 aa9.89□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Eif4g2Q62448 906 aaKnown RBP9.89□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Pank3Q8R2W9 370 aa9.89□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Rapgef2Q8CHG7 1496 aa9.89□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Slc4a1apE9PX68 744 aa9.89□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Arid4aF8VPQ2 1261 aaKnown RBP9.89□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Pde3bQ61409 1100 aa9.88□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Ccdc183A2AJB1 534 aa9.88□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Chmp4cQ9D7F7 232 aa9.88□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Stk26Q99JT2 416 aa9.88□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Stard8Q8K031 1019 aa9.88□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Kif16bB1AVY7 1312 aa9.88□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Fam193aQ8CGI1 1231 aaKnown RBP9.88□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Cgnl1Q6AW69 1298 aa9.88□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Fmn1Q05860 1466 aa9.87□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Znhit6Q3UFB2 460 aaKnown RBP9.87□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Kcnh8P59111 1102 aa9.87□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Kif3aP28741 701 aa9.87□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Sh3bgrQ9WUZ7 214 aa9.87□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Q3TQI7 289 aaKnown RBP9.87□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Nap1l3Q794H2 544 aa9.87□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Inpp5dQ9ES52 1191 aa9.87□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Pank1Q8K4K6 548 aa9.86□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Ccdc173A0JLY1 547 aa9.86□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Ccdc34Q3UI66 367 aa9.86□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Trim58Q5NCC9 485 aa9.86□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Kif27Q7M6Z4 1394 aa9.86□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Esx1O88933 382 aa9.86□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Kdm5dQ62240 1548 aa9.85□□□□□ -0.83
Scn8a-204ENSMUST00000108909 A0A0U1RNP2 1173 aa9.85□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Srcin1Q9QWI6 1250 aa9.84□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Ccdc60Q8C4J0 545 aa9.84□□□□□ -0.83
Scn8a-204ENSMUST00000108909 EzrP26040 586 aaKnown RBP9.84□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Birc3O08863 600 aa9.84□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Phactr2B1AVP0 632 aa9.84□□□□□ -0.83
Scn8a-204ENSMUST00000108909 Nup155Q99P88 1391 aaKnown RBP9.83□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Aebp1Q640N1 1128 aa9.83□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Cwc15Q9JHS9 229 aaKnown RBP9.83□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Mrvi1Q9WUX5 899 aaKnown RBP9.83□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Nol12Q8BG17 217 aa9.83□□□□□ -0.84
Scn8a-204ENSMUST00000108909 KinQ8K339 391 aa9.83□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Cc2d2aQ8CFW7 1633 aa9.83□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Zrsr2Q62377 462 aaKnown RBP9.83□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Pdia4P08003 638 aaKnown RBP9.83□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Zfp777B9EKF4 885 aa9.83□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Dusp9Q7TNL7 452 aa9.83□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Plekhh2Q8C115 1491 aa9.82□□□□□ -0.84
Scn8a-204ENSMUST00000108909 FosbP13346 338 aa9.82□□□□□ -0.84
Scn8a-204ENSMUST00000108909 PogkQ80TC5 607 aa9.82□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Ccdc30Q8BVF4 654 aa9.82□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Washc2Q6PGL7 1334 aa9.82□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Tpm1P58771 284 aa9.81□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Bicd2Q921C5 820 aa9.81□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Dapk1Q80YE7 1442 aa9.81□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Slc4a10Q5DTL9 1118 aa9.81□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Gabpb2P81069 414 aa9.81□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Tsen2Q6P7W5 460 aa9.81□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Cc2d1aQ8K1A6 943 aa9.81□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Stk11ipQ3TAA7 1072 aa9.81□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Tnpo1Q8BFY9 898 aaKnown RBP9.81□□□□□ -0.84
Scn8a-204ENSMUST00000108909 Mad1l1Q9WTX8 717 aaKnown RBP9.8□□□□□ -0.84
Scn8a-204ENSMUST00000108909 DmtnQ9WV69 405 aa9.8□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms