RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Cd109Q8R422 1442 aa21■□□□□ 0.95
Trim11-203ENSMUST00000108810 Pabpn1Q8CCS6 302 aaKnown RBP20.99■□□□□ 0.95
Trim11-203ENSMUST00000108810 Map3k5O35099 1380 aa20.99■□□□□ 0.95
Trim11-203ENSMUST00000108810 Rock1P70335 1354 aa20.99■□□□□ 0.95
Trim11-203ENSMUST00000108810 Ifnlr1Q8CGK5 535 aa20.98■□□□□ 0.95
Trim11-203ENSMUST00000108810 Spag9Q58A65 1321 aaKnown RBP20.98■□□□□ 0.95
Trim11-203ENSMUST00000108810 Atp7aQ64430 1491 aa20.98■□□□□ 0.95
Trim11-203ENSMUST00000108810 Rgl3Q3UYI5 709 aa20.98■□□□□ 0.95
Trim11-203ENSMUST00000108810 Kif1bQ60575 1816 aaKnown RBP20.96■□□□□ 0.95
Trim11-203ENSMUST00000108810 Anks4bQ8K3X6 423 aa20.96■□□□□ 0.95
Trim11-203ENSMUST00000108810 Myom3A2ABU4 1439 aa20.95■□□□□ 0.94
Trim11-203ENSMUST00000108810 Tarbp1E9Q368 1579 aa20.94■□□□□ 0.94
Trim11-203ENSMUST00000108810 Cpsf1Q9EPU4 1441 aaKnown RBP20.94■□□□□ 0.94
Trim11-203ENSMUST00000108810 Cdk13Q69ZA1 1511 aaKnown RBP20.93■□□□□ 0.94
Trim11-203ENSMUST00000108810 Dapk1Q80YE7 1442 aa20.93■□□□□ 0.94
Trim11-203ENSMUST00000108810 Nos1Q9Z0J4 1429 aa20.93■□□□□ 0.94
Trim11-203ENSMUST00000108810 Ppip5k1A2ARP1 1436 aa20.93■□□□□ 0.94
Trim11-203ENSMUST00000108810 Myo5cE9Q1F5 1742 aa20.91■□□□□ 0.94
Trim11-203ENSMUST00000108810 Arid3cA6PWV5 409 aa20.9■□□□□ 0.94
Trim11-203ENSMUST00000108810 Naip6Q9JIB6 1403 aa20.9■□□□□ 0.94
Trim11-203ENSMUST00000108810 Zbtb7cQ8VCZ7 619 aa20.89■□□□□ 0.94
Trim11-203ENSMUST00000108810 RalgapbQ8BQZ4 1484 aa20.89■□□□□ 0.93
Trim11-203ENSMUST00000108810 Pde4cQ3UEI1 686 aa20.88■□□□□ 0.93
Trim11-203ENSMUST00000108810 Polr3aB2RXC6 1390 aa20.87■□□□□ 0.93
Trim11-203ENSMUST00000108810 Ak9G3UYQ4 1894 aa20.87■□□□□ 0.93
Trim11-203ENSMUST00000108810 Washc2Q6PGL7 1334 aa20.87■□□□□ 0.93
Trim11-203ENSMUST00000108810 Smg6P61406 1418 aaKnown RBP20.87■□□□□ 0.93
Trim11-203ENSMUST00000108810 Kdm5cP41230 1554 aa20.86■□□□□ 0.93
Trim11-203ENSMUST00000108810 Fndc1E9Q043 1732 aa20.85■□□□□ 0.93
Trim11-203ENSMUST00000108810 Edc4Q3UJB9 1406 aaKnown RBP20.84■□□□□ 0.93
Trim11-203ENSMUST00000108810 Tmem131lQ3U3D7 1597 aa20.83■□□□□ 0.93
Trim11-203ENSMUST00000108810 Znf518aB2RRF6 1478 aaKnown RBP20.83■□□□□ 0.93
Trim11-203ENSMUST00000108810 Nsd2Q8BVE8 1365 aa20.82■□□□□ 0.92
Trim11-203ENSMUST00000108810 Adamts13Q769J6 1426 aa20.82■□□□□ 0.92
Trim11-203ENSMUST00000108810 Gm156Q58A37 223 aa20.82■□□□□ 0.92
Trim11-203ENSMUST00000108810 Lemd3Q9WU40 921 aa20.82■□□□□ 0.92
Trim11-203ENSMUST00000108810 Rundc1Q0VDN7 615 aa20.81■□□□□ 0.92
Trim11-203ENSMUST00000108810 Topbp1Q6ZQF0 1515 aa20.8■□□□□ 0.92
Trim11-203ENSMUST00000108810 AglF8VPN4 1532 aa20.8■□□□□ 0.92
Trim11-203ENSMUST00000108810 OvosQ3UU35 1456 aa20.79■□□□□ 0.92
Trim11-203ENSMUST00000108810 Grwd1Q810D6 446 aaKnown RBP20.78■□□□□ 0.92
Trim11-203ENSMUST00000108810 Cwc22Q8C5N3 908 aaKnown RBP20.78■□□□□ 0.92
Trim11-203ENSMUST00000108810 Atp10aO54827 1508 aa20.78■□□□□ 0.92
Trim11-203ENSMUST00000108810 Abca6Q8K441 1624 aa20.78■□□□□ 0.92
Trim11-203ENSMUST00000108810 Ylpm1Q9R0I7 1386 aaKnown RBP20.77■□□□□ 0.92
Trim11-203ENSMUST00000108810 Card11Q8CIS0 1159 aa20.76■□□□□ 0.91
Trim11-203ENSMUST00000108810 Plch2A2AP18 1501 aa20.76■□□□□ 0.91
Trim11-203ENSMUST00000108810 AnkarA2RT91 1465 aa20.76■□□□□ 0.91
Trim11-203ENSMUST00000108810 Hnrnpul2Q00PI9 745 aaKnown RBP20.76■□□□□ 0.91
Trim11-203ENSMUST00000108810 Kiaa0556Q8C753 1610 aa20.75■□□□□ 0.91
Trim11-203ENSMUST00000108810 Adgrl3Q80TS3 1537 aa20.74■□□□□ 0.91
Trim11-203ENSMUST00000108810 Plekhg5Q66T02 1073 aa20.74■□□□□ 0.91
Trim11-203ENSMUST00000108810 Uggt2E9Q4X2 1504 aa20.74■□□□□ 0.91
Trim11-203ENSMUST00000108810 Tulp4Q9JIL5 1547 aa20.74■□□□□ 0.91
Trim11-203ENSMUST00000108810 Clasp1Q80TV8 1535 aaKnown RBP20.73■□□□□ 0.91
Trim11-203ENSMUST00000108810 Kif3bQ61771 747 aa20.72■□□□□ 0.91
Trim11-203ENSMUST00000108810 Cdc42bpgQ80UW5 1551 aa20.72■□□□□ 0.91
Trim11-203ENSMUST00000108810 Prex1Q69ZK0 1650 aa20.72■□□□□ 0.91
Trim11-203ENSMUST00000108810 Setd1aE9PYH6 1716 aa20.71■□□□□ 0.91
Trim11-203ENSMUST00000108810 Col17a1Q07563 1470 aa20.71■□□□□ 0.91
Trim11-203ENSMUST00000108810 Iqgap3F8VQ29 1632 aa20.7■□□□□ 0.9
Trim11-203ENSMUST00000108810 Abcc6Q9R1S7 1498 aa20.69■□□□□ 0.9
Trim11-203ENSMUST00000108810 Ptch1Q61115 1434 aa20.68■□□□□ 0.9
Trim11-203ENSMUST00000108810 RereQ80TZ9 1558 aa20.68■□□□□ 0.9
Trim11-203ENSMUST00000108810 Rock2P70336 1388 aa20.68■□□□□ 0.9
Trim11-203ENSMUST00000108810 Dip2cE9PWR4 1557 aa20.67■□□□□ 0.9
Trim11-203ENSMUST00000108810 Depdc5P61460 1591 aa20.67■□□□□ 0.9
Trim11-203ENSMUST00000108810 Gli2Q0VGT2 1544 aa20.67■□□□□ 0.9
Trim11-203ENSMUST00000108810 AdgbG3UZ78 1657 aa20.66■□□□□ 0.9
Trim11-203ENSMUST00000108810 Abca8aQ8K442 1620 aa20.66■□□□□ 0.9
Trim11-203ENSMUST00000108810 Cul9Q80TT8 1865 aa20.66■□□□□ 0.9
Trim11-203ENSMUST00000108810 Hdac5Q9Z2V6 1113 aa20.66■□□□□ 0.9
Trim11-203ENSMUST00000108810 Prdm2A2A7B5 1709 aaKnown RBP20.64■□□□□ 0.89
Trim11-203ENSMUST00000108810 Ttc21bQ0HA38 1315 aa20.64■□□□□ 0.89
Trim11-203ENSMUST00000108810 Tubgcp6G5E8P0 1769 aa20.64■□□□□ 0.89
Trim11-203ENSMUST00000108810 Gm13695A2AK44 830 aa20.64■□□□□ 0.89
Trim11-203ENSMUST00000108810 Ifit1bl1D3Z6F0 470 aa20.62■□□□□ 0.89
Trim11-203ENSMUST00000108810 Trpm1Q2TV84 1622 aa20.62■□□□□ 0.89
Trim11-203ENSMUST00000108810 Stra8P70278 393 aa20.61■□□□□ 0.89
Trim11-203ENSMUST00000108810 Ttc37F8VPK0 1563 aa20.6■□□□□ 0.89
Trim11-203ENSMUST00000108810 Znf710Q3U288 666 aa20.59■□□□□ 0.89
Trim11-203ENSMUST00000108810 Mroh3A0A1D5RM54 893 aa20.59■□□□□ 0.89
Trim11-203ENSMUST00000108810 Sall3Q62255 1320 aa20.59■□□□□ 0.89
Trim11-203ENSMUST00000108810 Akap12Q9WTQ5 1684 aa20.58■□□□□ 0.89
Trim11-203ENSMUST00000108810 Adgrb3Q80ZF8 1522 aa20.58■□□□□ 0.88
Trim11-203ENSMUST00000108810 Ehbp1l1Q99MS7 1716 aa20.57■□□□□ 0.88
Trim11-203ENSMUST00000108810 Cep152A2AUM9 1736 aaKnown RBP20.56■□□□□ 0.88
Trim11-203ENSMUST00000108810 Tecpr2Q3UH45 1423 aa20.55■□□□□ 0.88
Trim11-203ENSMUST00000108810 Ino80Q6ZPV2 1559 aa20.55■□□□□ 0.88
Trim11-203ENSMUST00000108810 ErbinQ80TH2 1402 aa20.54■□□□□ 0.88
Trim11-203ENSMUST00000108810 Erich6D3Z6S9 713 aa20.54■□□□□ 0.88
Trim11-203ENSMUST00000108810 Efcab6Q6P1E8 1516 aa20.53■□□□□ 0.88
Trim11-203ENSMUST00000108810 Pola1P33609 1465 aa20.53■□□□□ 0.88
Trim11-203ENSMUST00000108810 Rims1Q99NE5 1463 aa20.53■□□□□ 0.88
Trim11-203ENSMUST00000108810 Yeats2Q3TUF7 1407 aa20.51■□□□□ 0.87
Trim11-203ENSMUST00000108810 Exoc6Q8R313 802 aa20.5■□□□□ 0.87
Trim11-203ENSMUST00000108810 Hecw2Q6I6G8 1578 aa20.5■□□□□ 0.87
Trim11-203ENSMUST00000108810 Csrnp3P59055 597 aa20.49■□□□□ 0.87
Trim11-203ENSMUST00000108810 AatkQ80YE4 1365 aa20.49■□□□□ 0.87
Trim11-203ENSMUST00000108810 Mrs2Q5NCE8 434 aa20.48■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms