RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Ccer2J3QPU5 274 aa33.16■■■□□ 2.9
Scn1b-201ENSMUST00000098548 Alpk3Q924C5 1678 aa33.16■■■□□ 2.9
Scn1b-201ENSMUST00000098548 Adamtsl3G3UXC7 1706 aa33.14■■■□□ 2.9
Scn1b-201ENSMUST00000098548 Nup155Q99P88 1391 aaKnown RBP33.12■■■□□ 2.89
Scn1b-201ENSMUST00000098548 Topbp1Q6ZQF0 1515 aa33.11■■■□□ 2.89
Scn1b-201ENSMUST00000098548 Las1lA2BE28 776 aaKnown RBP33.11■■■□□ 2.89
Scn1b-201ENSMUST00000098548 ShprhQ7TPQ3 1674 aa33.1■■■□□ 2.89
Scn1b-201ENSMUST00000098548 Trpm2Q91YD4 1506 aa33.09■■■□□ 2.89
Scn1b-201ENSMUST00000098548 Plch2A2AP18 1501 aa33.07■■■□□ 2.88
Scn1b-201ENSMUST00000098548 Map4P27546 1125 aaKnown RBP33.06■■■□□ 2.88
Scn1b-201ENSMUST00000098548 Pde4cQ3UEI1 686 aa33.04■■■□□ 2.88
Scn1b-201ENSMUST00000098548 Uggt2E9Q4X2 1504 aa33.04■■■□□ 2.88
Scn1b-201ENSMUST00000098548 Myo5cE9Q1F5 1742 aa33.04■■■□□ 2.88
Scn1b-201ENSMUST00000098548 Hnrnpul2Q00PI9 745 aaKnown RBP33.04■■■□□ 2.88
Scn1b-201ENSMUST00000098548 Kif1bQ60575 1816 aaKnown RBP33.03■■■□□ 2.88
Scn1b-201ENSMUST00000098548 Ttll5Q8CHB8 1328 aa33.02■■■□□ 2.88
Scn1b-201ENSMUST00000098548 Asxl1P59598 1514 aa33.02■■■□□ 2.88
Scn1b-201ENSMUST00000098548 Afap1Q80YS6 731 aa32.99■■■□□ 2.87
Scn1b-201ENSMUST00000098548 Supt6hQ62383 1726 aaKnown RBP32.99■■■□□ 2.87
Scn1b-201ENSMUST00000098548 TonslQ6NZL6 1363 aa32.98■■■□□ 2.87
Scn1b-201ENSMUST00000098548 Clstn2Q9ER65 966 aa32.96■■■□□ 2.87
Scn1b-201ENSMUST00000098548 Camsap2Q8C1B1 1461 aa32.95■■■□□ 2.87
Scn1b-201ENSMUST00000098548 MlecQ6ZQI3 291 aaKnown RBP32.95■■■□□ 2.86
Scn1b-201ENSMUST00000098548 Mphosph9A6H5Y1 991 aa32.94■■■□□ 2.86
Scn1b-201ENSMUST00000098548 Naip5Q9R016 1403 aa32.92■■■□□ 2.86
Scn1b-201ENSMUST00000098548 Abca6Q8K441 1624 aa32.91■■■□□ 2.86
Scn1b-201ENSMUST00000098548 Prex1Q69ZK0 1650 aa32.89■■■□□ 2.86
Scn1b-201ENSMUST00000098548 Ankrd36D3Z4K0 1415 aa32.88■■■□□ 2.85
Scn1b-201ENSMUST00000098548 Trak1Q6PD31 939 aa32.87■■■□□ 2.85
Scn1b-201ENSMUST00000098548 Safb2Q80YR5 991 aaKnown RBP32.87■■■□□ 2.85
Scn1b-201ENSMUST00000098548 Robo2Q7TPD3 1470 aa32.85■■■□□ 2.85
Scn1b-201ENSMUST00000098548 Lamc1P02468 1607 aaKnown RBP32.84■■■□□ 2.85
Scn1b-201ENSMUST00000098548 CltcQ68FD5 1675 aaKnown RBP32.84■■■□□ 2.85
Scn1b-201ENSMUST00000098548 Eid3Q3V124 375 aa32.81■■■□□ 2.84
Scn1b-201ENSMUST00000098548 Kif21bQ9QXL1 1668 aa32.81■■■□□ 2.84
Scn1b-201ENSMUST00000098548 PtprgQ05909 1442 aa32.8■■■□□ 2.84
Scn1b-201ENSMUST00000098548 Cd109Q8R422 1442 aa32.8■■■□□ 2.84
Scn1b-201ENSMUST00000098548 Myom3A2ABU4 1439 aa32.75■■■□□ 2.83
Scn1b-201ENSMUST00000098548 Tmem131lQ3U3D7 1597 aa32.75■■■□□ 2.83
Scn1b-201ENSMUST00000098548 RictorQ6QI06 1708 aa32.74■■■□□ 2.83
Scn1b-201ENSMUST00000098548 Ttc21bQ0HA38 1315 aa32.72■■■□□ 2.83
Scn1b-201ENSMUST00000098548 Myom2Q14BI5 1463 aa32.72■■■□□ 2.83
Scn1b-201ENSMUST00000098548 Dhx9O70133 1380 aaKnown RBP32.71■■■□□ 2.83
Scn1b-201ENSMUST00000098548 Ylpm1Q9R0I7 1386 aaKnown RBP32.71■■■□□ 2.83
Scn1b-201ENSMUST00000098548 Pkd2O35245 966 aa32.7■■■□□ 2.83
Scn1b-201ENSMUST00000098548 Nsd2Q8BVE8 1365 aa32.69■■■□□ 2.82
Scn1b-201ENSMUST00000098548 AnkarA2RT91 1465 aa32.69■■■□□ 2.82
Scn1b-201ENSMUST00000098548 Rsph4aQ8BYM7 716 aa32.68■■■□□ 2.82
Scn1b-201ENSMUST00000098548 Arhgap23Q69ZH9 1483 aa32.68■■■□□ 2.82
Scn1b-201ENSMUST00000098548 Atp7aQ64430 1491 aa32.66■■■□□ 2.82
Scn1b-201ENSMUST00000098548 Talpid3E9PV87 1520 aa32.66■■■□□ 2.82
Scn1b-201ENSMUST00000098548 Adamts7Q68SA9 1657 aa32.66■■■□□ 2.82
Scn1b-201ENSMUST00000098548 MyclP10166 368 aa32.66■■■□□ 2.82
Scn1b-201ENSMUST00000098548 Pcgf6Q99NA9 353 aa32.66■■■□□ 2.82
Scn1b-201ENSMUST00000098548 Knl1Q66JQ7 1612 aa32.63■■■□□ 2.81
Scn1b-201ENSMUST00000098548 Hfm1D3Z4R1 1434 aa32.59■■■□□ 2.81
Scn1b-201ENSMUST00000098548 Erich6D3Z6S9 713 aa32.58■■■□□ 2.81
Scn1b-201ENSMUST00000098548 Akap12Q9WTQ5 1684 aa32.57■■■□□ 2.8
Scn1b-201ENSMUST00000098548 Gm13697A2AK42 830 aa32.53■■■□□ 2.8
Scn1b-201ENSMUST00000098548 Dip2bQ3UH60 1574 aa32.53■■■□□ 2.8
Scn1b-201ENSMUST00000098548 Med14A2ABV5 1459 aaKnown RBP32.51■■■□□ 2.79
Scn1b-201ENSMUST00000098548 Iqgap3F8VQ29 1632 aa32.51■■■□□ 2.79
Scn1b-201ENSMUST00000098548 Hspa5P20029 655 aaKnown RBP32.49■■■□□ 2.79
Scn1b-201ENSMUST00000098548 4930407I10RikD3Z5T8 1512 aa32.49■■■□□ 2.79
Scn1b-201ENSMUST00000098548 Supt5hO55201 1082 aaKnown RBP32.49■■■□□ 2.79
Scn1b-201ENSMUST00000098548 Edc4Q3UJB9 1406 aaKnown RBP32.49■■■□□ 2.79
Scn1b-201ENSMUST00000098548 Prdm2A2A7B5 1709 aaKnown RBP32.48■■■□□ 2.79
Scn1b-201ENSMUST00000098548 Tarbp1E9Q368 1579 aa32.48■■■□□ 2.79
Scn1b-201ENSMUST00000098548 PtprmP28828 1452 aa32.48■■■□□ 2.79
Scn1b-201ENSMUST00000098548 Ino80Q6ZPV2 1559 aa32.47■■■□□ 2.79
Scn1b-201ENSMUST00000098548 Brwd3A2AHJ4 1799 aa32.46■■■□□ 2.79
Scn1b-201ENSMUST00000098548 Dot1lQ6XZL8 1540 aa32.45■■■□□ 2.78
Scn1b-201ENSMUST00000098548 Ercc6l2Q9JIM3 1537 aa32.43■■■□□ 2.78
Scn1b-201ENSMUST00000098548 Stk24Q99KH8 431 aa32.42■■■□□ 2.78
Scn1b-201ENSMUST00000098548 Abcc6Q9R1S7 1498 aa32.42■■■□□ 2.78
Scn1b-201ENSMUST00000098548 Pik3c2gO70167 1506 aa32.41■■■□□ 2.78
Scn1b-201ENSMUST00000098548 Adgrb3Q80ZF8 1522 aa32.4■■■□□ 2.78
Scn1b-201ENSMUST00000098548 Sall3Q62255 1320 aa32.4■■■□□ 2.78
Scn1b-201ENSMUST00000098548 Tecpr2Q3UH45 1423 aa32.39■■■□□ 2.78
Scn1b-201ENSMUST00000098548 Usp47Q8BY87 1376 aa32.39■■■□□ 2.78
Scn1b-201ENSMUST00000098548 Ahdc1Q6PAL7 1594 aaKnown RBP32.38■■■□□ 2.77
Scn1b-201ENSMUST00000098548 Rprd2Q6NXI6 1469 aaKnown RBP32.37■■■□□ 2.77
Scn1b-201ENSMUST00000098548 Skint5A7XUY5 1461 aa32.36■■■□□ 2.77
Scn1b-201ENSMUST00000098548 Wdr66E9Q743 1299 aa32.36■■■□□ 2.77
Scn1b-201ENSMUST00000098548 ClspnQ80YR7 1315 aa32.35■■■□□ 2.77
Scn1b-201ENSMUST00000098548 ErbinQ80TH2 1402 aa32.34■■■□□ 2.77
Scn1b-201ENSMUST00000098548 Abca8aQ8K442 1620 aa32.33■■■□□ 2.77
Scn1b-201ENSMUST00000098548 Kif13aQ9EQW7 1749 aa32.32■■■□□ 2.76
Scn1b-201ENSMUST00000098548 Topaz1E5FYH1 1653 aa32.31■■■□□ 2.76
Scn1b-201ENSMUST00000098548 Efcab6Q6P1E8 1516 aa32.3■■■□□ 2.76
Scn1b-201ENSMUST00000098548 Ehbp1l1Q99MS7 1716 aa32.28■■■□□ 2.76
Scn1b-201ENSMUST00000098548 Ppip5k1A2ARP1 1436 aa32.28■■■□□ 2.76
Scn1b-201ENSMUST00000098548 Bcl9Q9D219 1425 aa32.27■■■□□ 2.76
Scn1b-201ENSMUST00000098548 Washc2Q6PGL7 1334 aa32.27■■■□□ 2.76
Scn1b-201ENSMUST00000098548 Itsn1Q9Z0R4 1714 aa32.26■■■□□ 2.75
Scn1b-201ENSMUST00000098548 DroshaQ5HZJ0 1373 aaKnown RBP32.26■■■□□ 2.75
Scn1b-201ENSMUST00000098548 Rgl3Q3UYI5 709 aa32.25■■■□□ 2.75
Scn1b-201ENSMUST00000098548 AatkQ80YE4 1365 aa32.25■■■□□ 2.75
Scn1b-201ENSMUST00000098548 Chd2E9PZM4 1827 aaKnown RBP32.24■■■□□ 2.75
Scn1b-201ENSMUST00000098548 Rock1P70335 1354 aa32.23■■■□□ 2.75
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms